Variant information

Chr04:49196079 - 49198483

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
49196125GA401613.771.00DOWNSTREAM(|1825||None|Vigan.04G373400.01), DOWNSTREAM(|4103||None|Vigan.04G373600.01), UTR_3_PRIME(|320||None|Vigan.04G373500.01)Vigna nepalensis
49196313AG481991.771.00DOWNSTREAM(|2013||None|Vigan.04G373400.01), DOWNSTREAM(|3915||None|Vigan.04G373600.01), UTR_3_PRIME(|132||None|Vigan.04G373500.01)Vigna nepalensis
49197094CA612452.771.00DOWNSTREAM(|2794||None|Vigan.04G373400.01), DOWNSTREAM(|3134||None|Vigan.04G373600.01), INTRON(|||None|Vigan.04G373500.01)Vigna nepalensis
49197336GT451796.771.00DOWNSTREAM(|2892||None|Vigan.04G373600.01), DOWNSTREAM(|3036||None|Vigan.04G373400.01), INTRON(|||None|Vigan.04G373500.01)Vigna nepalensis
49197415CG602411.771.00DOWNSTREAM(|2813||None|Vigan.04G373600.01), DOWNSTREAM(|3115||None|Vigan.04G373400.01), INTRON(|||None|Vigan.04G373500.01)Vigna nepalensis
49197545TC672950.771.00DOWNSTREAM(|2683||None|Vigan.04G373600.01), DOWNSTREAM(|3245||None|Vigan.04G373400.01), SYNONYMOUS_CODING(SILENT|aaA/aaG|K82|None|Vigan.04G373500.01)Vigna nepalensis
49197551CA622821.771.00DOWNSTREAM(|2677||None|Vigan.04G373600.01), DOWNSTREAM(|3251||None|Vigan.04G373400.01), SYNONYMOUS_CODING(SILENT|gtG/gtT|V80|None|Vigan.04G373500.01)Vigna nepalensis
49197620TC682694.771.00DOWNSTREAM(|2608||None|Vigan.04G373600.01), DOWNSTREAM(|3320||None|Vigan.04G373400.01), SYNONYMOUS_CODING(SILENT|gaA/gaG|E57|None|Vigan.04G373500.01)Vigna nepalensis
49197963AG451996.771.00DOWNSTREAM(|2265||None|Vigan.04G373600.01), DOWNSTREAM(|3663||None|Vigan.04G373400.01), INTRON(|||None|Vigan.04G373500.01)Vigna nepalensis
49197972AT411788.771.00DOWNSTREAM(|2256||None|Vigan.04G373600.01), DOWNSTREAM(|3672||None|Vigan.04G373400.01), INTRON(|||None|Vigan.04G373500.01)Vigna nepalensis
49198097AG682735.771.00DOWNSTREAM(|2131||None|Vigan.04G373600.01), DOWNSTREAM(|3797||None|Vigan.04G373400.01), INTRON(|||None|Vigan.04G373500.01)Vigna nepalensis
49198260TC572173.771.00DOWNSTREAM(|1968||None|Vigan.04G373600.01), DOWNSTREAM(|3960||None|Vigan.04G373400.01), SYNONYMOUS_CODING(SILENT|ctA/ctG|L26|None|Vigan.04G373500.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
49196102CCTA451987.731.00DOWNSTREAM(|1803||None|Vigan.04G373400.01), DOWNSTREAM(|4125||None|Vigan.04G373600.01), UTR_3_PRIME(|342||None|Vigan.04G373500.01)Vigna nepalensis
49197139ACA572256.731.00DOWNSTREAM(|2840||None|Vigan.04G373400.01), DOWNSTREAM(|3088||None|Vigan.04G373600.01), INTRON(|||None|Vigan.04G373500.01)Vigna nepalensis
49197956CCCTT391807.731.00DOWNSTREAM(|2271||None|Vigan.04G373600.01), DOWNSTREAM(|3657||None|Vigan.04G373400.01), INTRON(|||None|Vigan.04G373500.01)Vigna nepalensis