Variant information

Chr04:4548631 - 4552409

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
4548635GA542037.771.00UTR_5_PRIME(|249||None|Vigan.04G050800.01)Vigna nepalensis
4548743CT512151.771.00UTR_5_PRIME(|141||None|Vigan.04G050800.01)Vigna nepalensis
4548784CT421702.771.00START_GAINED(|||None|Vigan.04G050800.01), UTR_5_PRIME(|100||None|Vigan.04G050800.01)Vigna nepalensis
4548897GC482176.771.00NON_SYNONYMOUS_CODING(MISSENSE|aGc/aCc|S5T|None|Vigan.04G050800.01)Vigna nepalensis
4548900CA502176.771.00NON_SYNONYMOUS_CODING(MISSENSE|cCa/cAa|P6Q|None|Vigan.04G050800.01)Vigna nepalensis
4548951AC421678.771.00NON_SYNONYMOUS_CODING(MISSENSE|aAc/aCc|N23T|None|Vigan.04G050800.01)Vigna nepalensis
4549504GC521925.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4549725AC702914.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4549787TG612663.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4549813TG602274.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4549909CG602494.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4550364CT622477.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4550528CG521962.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4550882AT471957.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4550908AC451880.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4551153AG512040.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4551459CT542205.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4551702CA381597.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4551735GA371545.771.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4551897GA451737.771.00NON_SYNONYMOUS_CODING(MISSENSE|Gtt/Att|V245I|None|Vigan.04G050800.01)Vigna nepalensis
4552056AT511953.771.00UTR_3_PRIME(|25||None|Vigan.04G050800.01)Vigna nepalensis
4552081AC502002.771.00UTR_3_PRIME(|50||None|Vigan.04G050800.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
4549766CCCTTACCAATAATAATGTTTTAGAAAACCAATATAT703971.731.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4550658AATG481904.731.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis
4551015TTTG391720.731.00INTRON(|||None|Vigan.04G050800.01)Vigna nepalensis