VIGGS:Variant information

Chr04:29773237 - 29775217

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
29773283	T	C	48	1939.77	1.00	SYNONYMOUS_CODING(SILENT\|ttT/ttC\|F10\|None\|Vigan.04G204300.01)	Vigna nepalensis
29773387	C	G	50	2097.77	1.00	NON_SYNONYMOUS_CODING(MISSENSE\|gCt/gGt\|A45G\|None\|Vigan.04G204300.01)	Vigna nepalensis
29773496	A	G	55	2216.77	1.00	INTRON(\|\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29773696	G	A	61	2471.77	1.00	INTRON(\|\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29774140	A	T	60	2735.77	1.00	INTRON(\|\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29774143	A	G	60	2735.77	1.00	INTRON(\|\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29774189	T	C	51	1998.77	1.00	INTRON(\|\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29774842	T	G	35	1438.77	1.00	SYNONYMOUS_CODING(SILENT\|ggT/ggG\|G226\|None\|Vigan.04G204300.01)	Vigna nepalensis
29774893	T	C	40	1595.77	1.00	SYNONYMOUS_CODING(SILENT\|atT/atC\|I243\|None\|Vigan.04G204300.01)	Vigna nepalensis
29775004	A	G	39	1683.77	1.00	UTR_3_PRIME(\|3\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29775109	A	T	55	2565.77	1.00	UTR_3_PRIME(\|108\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29775121	G	C	57	2562.77	1.00	UTR_3_PRIME(\|120\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29775153	C	G	61	2476.77	1.00	UTR_3_PRIME(\|152\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29775208	T	G	56	2441.77	1.00	UTR_3_PRIME(\|207\|\|None\|Vigan.04G204300.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
29774086	TA	T	55	1628.73	1.00	INTRON(\|\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29774255	T	TCC	48	2109.73	1.00	INTRON(\|\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29775019	T	TG	41	1810.73	1.00	UTR_3_PRIME(\|19\|\|None\|Vigan.04G204300.01)	Vigna nepalensis
29775213	TA	T	54	2333.73	1.00	UTR_3_PRIME(\|213\|\|None\|Vigan.04G204300.01)	Vigna nepalensis