Variant information

Chr03:42668092 - 42673706

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
42668897AT441881.771.00DOWNSTREAM(|956||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42669514CA612488.771.00DOWNSTREAM(|1573||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42669649TA501974.771.00DOWNSTREAM(|1708||None|Vigan.03G288700.01), SYNONYMOUS_CODING(SILENT|acA/acT|T558|None|Vigan.03G288800.01)Vigna nepalensis
42669701TC532134.771.00DOWNSTREAM(|1760||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42669716CT501972.771.00DOWNSTREAM(|1775||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42669735GA461812.771.00DOWNSTREAM(|1794||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42669900GC521997.771.00DOWNSTREAM(|1959||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42670056GC491961.771.00DOWNSTREAM(|2115||None|Vigan.03G288700.01), NON_SYNONYMOUS_CODING(MISSENSE|aCt/aGt|T481S|None|Vigan.03G288800.01)Vigna nepalensis
42670108GT451733.771.00DOWNSTREAM(|2167||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42670260CT401886.771.00DOWNSTREAM(|2319||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42670269AT441926.771.00DOWNSTREAM(|2328||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42670296TC431717.771.00DOWNSTREAM(|2355||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42671084CG552234.771.00DOWNSTREAM(|3143||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42671135TG602482.771.00DOWNSTREAM(|3194||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42671220TC612383.771.00DOWNSTREAM(|3279||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42671406AC542174.771.00DOWNSTREAM(|3465||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42671784AG441770.771.00DOWNSTREAM(|3843||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42671831CG492018.771.00DOWNSTREAM(|3890||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42672275GA522128.771.00DOWNSTREAM(|4334||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42672625TA481894.771.00DOWNSTREAM(|4684||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42673219CT663121.771.00INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42673221TC673121.771.00INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42673228GA693106.771.00INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42673294GA552028.771.00SYNONYMOUS_CODING(SILENT|ggC/ggT|G39|None|Vigan.03G288800.01)Vigna nepalensis
42673476GC582257.771.00START_GAINED(|||None|Vigan.03G288800.01), UTR_5_PRIME(|66||None|Vigan.03G288800.01)Vigna nepalensis
42673689CT733008.771.00UTR_5_PRIME(|279||None|Vigan.03G288800.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
42668173ATA611794.731.00DOWNSTREAM(|233||None|Vigan.03G288700.01), UTR_3_PRIME(|296||None|Vigan.03G288800.01)Vigna nepalensis
42668834GAG501511.731.00DOWNSTREAM(|894||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42670163AAC391536.731.00DOWNSTREAM(|2223||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42670182AAGAAACGGCA321388.731.00DOWNSTREAM(|2242||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42672324TATGT462021.731.00DOWNSTREAM(|4384||None|Vigan.03G288700.01), INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42673189TGT672916.731.00INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42673201GGAGAC693217.731.00INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis
42673229TAT693097.731.00INTRON(|||None|Vigan.03G288800.01)Vigna nepalensis