Variant information

Chr03:36677525 - 36690181

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
36677691AC491953.771.00DOWNSTREAM(|1960||None|Vigan.03G233100.01), UTR_5_PRIME(|38||None|Vigan.03G233200.01)Vigna nepalensis
36677793TA491789.771.00DOWNSTREAM(|2062||None|Vigan.03G233100.01), NON_SYNONYMOUS_CODING(MISSENSE|aTc/aAc|I22N|None|Vigan.03G233200.01)Vigna nepalensis
36678034TC632400.771.00DOWNSTREAM(|2303||None|Vigan.03G233100.01), SYNONYMOUS_CODING(SILENT|gtT/gtC|V73|None|Vigan.03G233200.01)Vigna nepalensis
36678370AG612359.771.00DOWNSTREAM(|2639||None|Vigan.03G233100.01), INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36678914GA522023.771.00DOWNSTREAM(|3183||None|Vigan.03G233100.01), INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36679151CT411637.771.00DOWNSTREAM(|3420||None|Vigan.03G233100.01), INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36680253GA622770.771.00DOWNSTREAM(|4522||None|Vigan.03G233100.01), INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36680558TC642427.771.00DOWNSTREAM(|4827||None|Vigan.03G233100.01), INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36680710AG672576.771.00DOWNSTREAM(|4979||None|Vigan.03G233100.01), INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36680833CT532091.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36680858TC511962.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36680884GA512014.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36680918TC672656.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36681208GC401694.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36681967CT552156.771.00SYNONYMOUS_CODING(SILENT|ctC/ctT|L214|None|Vigan.03G233200.01)Vigna nepalensis
36682479AG642543.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36683743CA551950.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36683793TC582293.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36683901AG622422.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36683967TC542161.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36684243CA652543.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36684268GA572308.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36684630CT582447.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36684733CT632471.770.97INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36684792TG96204.770.20INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36685146TG941294.770.39INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36685148CT95832.770.27INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36685392TA100600.770.21INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36685394GA97612.770.22INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36685407TC931386.770.38INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36685421GA971425.770.39INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36685423CT97460.770.16INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36685452AG100369.770.16INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36685778TC994647.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36686204TC451797.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36686242AG481830.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36686278AG481883.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36686744AC991314.770.37INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36686750GT981028.770.35INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36686788AG994429.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36686806GA941151.770.41INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36686810GA1001358.770.37INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36686852GA991859.770.46INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36686858AT96480.770.19INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36686861GA922000.770.53INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687089TG921223.770.40INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687091GT922096.730.61INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687128GA671637.770.58INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687131GA57463.730.28INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687143TG61138.770.13INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687149CT531098.770.49INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687150AC531059.770.49INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687160GA47807.770.45INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687185TC54482.770.30INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687232CT48225.770.19INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687236AG49184.770.16INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687259TC421882.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687695CT361618.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36688206GA712729.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36688718AG602341.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36689053CT602470.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36689224TG552149.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36689500CA471890.771.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36689915TC431601.771.00UPSTREAM(|4878||None|Vigan.03G233300.01), UTR_3_PRIME(|83||None|Vigan.03G233200.01)Vigna nepalensis
36690026GA491930.771.00UPSTREAM(|4767||None|Vigan.03G233300.01), UTR_3_PRIME(|194||None|Vigan.03G233200.01)Vigna nepalensis
36690045GA481824.771.00UPSTREAM(|4748||None|Vigan.03G233300.01), UTR_3_PRIME(|213||None|Vigan.03G233200.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
36677902TTCCGCT472061.731.00DOWNSTREAM(|2172||None|Vigan.03G233100.01), INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36679894AAT591619.731.00DOWNSTREAM(|4164||None|Vigan.03G233100.01), INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36680242AAG47939.190.87DOWNSTREAM(|4512||None|Vigan.03G233100.01), INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36680963TAT591763.731.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36681025CCAA582595.731.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36682161TTA582167.731.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36682848TAT491296.730.98INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36684780GGT84316.730.15INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687135AAG64782.730.36INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687136TTG50851.730.44INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687237AAC47133.730.15INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis
36687680TTTATATA311491.731.00INTRON(|||None|Vigan.03G233200.01)Vigna nepalensis