Variant information

Chr03:29659414 - 29662484

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
29659775AC401516.771.00UTR_5_PRIME(|102||None|Vigan.03G191700.01)Vigna nepalensis
29660073GT321271.771.00NON_SYNONYMOUS_CODING(MISSENSE|cGg/cTg|R66L|None|Vigan.03G191700.01)Vigna nepalensis
29660167GT351674.771.00NON_SYNONYMOUS_CODING(MISSENSE|ttG/ttT|L97F|None|Vigan.03G191700.01)Vigna nepalensis
29660178GA391797.771.00NON_SYNONYMOUS_CODING(MISSENSE|aGc/aAc|S101N|None|Vigan.03G191700.01)Vigna nepalensis
29660202CT441879.771.00NON_SYNONYMOUS_CODING(MISSENSE|tCa/tTa|S109L|None|Vigan.03G191700.01)Vigna nepalensis
29660277GA341371.771.00NON_SYNONYMOUS_CODING(MISSENSE|aGa/aAa|R134K|None|Vigan.03G191700.01)Vigna nepalensis
29660345AG381434.771.00NON_SYNONYMOUS_CODING(MISSENSE|Aag/Gag|K157E|None|Vigan.03G191700.01)Vigna nepalensis
29660647CT451818.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29660664CT461839.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29660697AG451978.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29660698AT451978.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29660915TC431718.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29660973GA562105.770.98INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661071CG532368.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661078GA542427.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661117AC441690.771.00SYNONYMOUS_CODING(SILENT|atA/atC|I252|None|Vigan.03G191700.01)Vigna nepalensis
29661260TG421882.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661262TA411882.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661288GC431922.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661292TA411938.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661309TG441991.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661316CT482111.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661422AG431932.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661424CA431932.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661501CA652921.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661503AC642965.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661513GA602667.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661558AT522411.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661563GT532338.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661580GT552464.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661581CG552514.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661589CT542511.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661607TG532391.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661613TG552527.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661618AG582587.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661658TC632335.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661794CA632476.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661870AT572266.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661892AT562263.771.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661976GA612359.771.00SYNONYMOUS_CODING(SILENT|acG/acA|T295|None|Vigan.03G191700.01)Vigna nepalensis
29662003GT592226.771.00SYNONYMOUS_CODING(SILENT|gtG/gtT|V304|None|Vigan.03G191700.01)Vigna nepalensis
29662138TA512233.771.00SYNONYMOUS_CODING(SILENT|gcT/gcA|A349|None|Vigan.03G191700.01)Vigna nepalensis
29662139GT502233.771.00NON_SYNONYMOUS_CODING(MISSENSE|Gca/Tca|A350S|None|Vigan.03G191700.01)Vigna nepalensis
29662236GA572215.771.00UTR_3_PRIME(|8||None|Vigan.03G191700.01)Vigna nepalensis
29662365TC492200.771.00UTR_3_PRIME(|137||None|Vigan.03G191700.01)Vigna nepalensis
29662366AG502200.771.00UTR_3_PRIME(|138||None|Vigan.03G191700.01)Vigna nepalensis
29662448CT552216.771.00UTR_3_PRIME(|220||None|Vigan.03G191700.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
29660682ATA381031.731.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29660784TTAA351520.731.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661224TATAT512239.731.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis
29661462GGAATTTGATTTTTAC482563.731.00INTRON(|||None|Vigan.03G191700.01)Vigna nepalensis