Variant information

Chr03:29347879 - 29359413

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
29348248AT38907.770.95INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29348640GA431614.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29348764TG562286.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29349317TA532142.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29349428AT542154.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29349868TC572230.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29349913CA662611.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29349924CA652922.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29349925AT662922.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29350447GA542192.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29350473TC492054.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29350786GT572373.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29350810AT542178.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29350885TC592391.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29351022TA492198.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29351030AT482142.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29351182TA532085.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29351363CT722887.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29351428GA662613.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29351534GA662684.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29351716TC632485.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29351992TC562518.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29352000CT562459.771.00INTRON(|||None|Vigan.03G189400.01), SPLICE_SITE_REGION(|||None|Vigan.03G189400.01)Vigna nepalensis
29352616CG501975.771.00NON_SYNONYMOUS_CODING(MISSENSE|Caa/Gaa|Q346E|None|Vigan.03G189400.01)Vigna nepalensis
29352751CG512261.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29352752GA512261.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29353500AG411544.770.98SYNONYMOUS_CODING(SILENT|gcA/gcG|A379|None|Vigan.03G189400.01)Vigna nepalensis
29353792CG481879.771.00SYNONYMOUS_CODING(SILENT|gtC/gtG|V429|None|Vigan.03G189400.01)Vigna nepalensis
29354214TC391710.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29354215GA371710.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29354226GT371505.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29354348GT582253.771.00SYNONYMOUS_CODING(SILENT|gtG/gtT|V511|None|Vigan.03G189400.01)Vigna nepalensis
29354383GA522089.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29354608CA692719.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29354647AT702856.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29354907CT642460.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29355261TA471877.771.00SYNONYMOUS_CODING(SILENT|gcT/gcA|A601|None|Vigan.03G189400.01)Vigna nepalensis
29355465CT612754.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29355475AT622754.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29355548CG602417.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29355953AC602396.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29356085CT532114.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29356267TG562266.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29356541AG461840.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29356579TC451855.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29356627TA552419.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29356649GA562575.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29356652GT552530.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29356755TG501905.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29356804TC411594.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29356855AC431658.771.00SYNONYMOUS_CODING(SILENT|ggA/ggC|G740|None|Vigan.03G189400.01)Vigna nepalensis
29357045TA492188.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357049AG502227.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357129CT471995.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357151AG512261.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357259AG672798.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357361GA622713.771.00NON_SYNONYMOUS_CODING(MISSENSE|Gca/Aca|A811T|None|Vigan.03G189400.01)Vigna nepalensis
29357367GT582671.771.00NON_SYNONYMOUS_CODING(MISSENSE|Gta/Tta|V813L|None|Vigan.03G189400.01)Vigna nepalensis
29357423GT492043.771.00SYNONYMOUS_CODING(SILENT|acG/acT|T831|None|Vigan.03G189400.01)Vigna nepalensis
29357548TG552186.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357620GC431871.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357650GT421875.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357711TA351421.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357855TC431712.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357867CA401616.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357940GA511899.771.00SYNONYMOUS_CODING(SILENT|ctG/ctA|L870|None|Vigan.03G189400.01)Vigna nepalensis
29358007GT501963.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29358050GC492016.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29358082AC582400.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29358137AG512027.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29358526GT502009.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29358915GT652579.771.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29359170TG441755.771.00UTR_3_PRIME(|18||None|Vigan.03G189400.01)Vigna nepalensis
29359303CT582383.771.00UTR_3_PRIME(|151||None|Vigan.03G189400.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
29348207GGT511530.731.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29352478CTC501373.731.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29354577TTTGTGTTGTAA643000.731.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29355843TAT672656.731.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29356639GAAG532566.731.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29357622CTTTTC431862.731.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis
29358645GAAAATAAATAAGAAAG552353.731.00INTRON(|||None|Vigan.03G189400.01)Vigna nepalensis