VIGGS:Variant information

Chr03:10546414 - 10549513

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
10546855	T	G	40	1551.77	1.00	START_GAINED(\|\|\|None\|Vigan.03G102800.01), UTR_5_PRIME(\|456\|\|None\|Vigan.03G102800.01)	Vigna nepalensis
10546957	T	C	55	2227.77	1.00	UTR_5_PRIME(\|354\|\|None\|Vigan.03G102800.01)	Vigna nepalensis
10547099	T	C	45	1867.77	1.00	START_GAINED(\|\|\|None\|Vigan.03G102800.01), UTR_5_PRIME(\|212\|\|None\|Vigan.03G102800.01)	Vigna nepalensis
10547199	A	G	69	2636.77	1.00	UTR_5_PRIME(\|112\|\|None\|Vigan.03G102800.01)	Vigna nepalensis
10547481	G	A	48	1849.77	1.00	SYNONYMOUS_CODING(SILENT\|gcG/gcA\|A57\|None\|Vigan.03G102800.01)	Vigna nepalensis
10547738	C	T	41	1627.77	1.00	SYNONYMOUS_CODING(SILENT\|acC/acT\|T111\|None\|Vigan.03G102800.01)	Vigna nepalensis
10547867	T	G	58	2348.77	1.00	INTRON(\|\|\|None\|Vigan.03G102800.01)	Vigna nepalensis
10548188	C	A	56	2199.77	1.00	INTRON(\|\|\|None\|Vigan.03G102800.01)	Vigna nepalensis
10548210	A	G	57	2147.77	1.00	INTRON(\|\|\|None\|Vigan.03G102800.01)	Vigna nepalensis
10548265	T	G	69	2838.77	1.00	INTRON(\|\|\|None\|Vigan.03G102800.01)	Vigna nepalensis
10549442	T	C	66	2544.77	1.00	UPSTREAM(\|4852\|\|None\|Vigan.03G102900.01), UTR_3_PRIME(\|269\|\|None\|Vigan.03G102800.01)	Vigna nepalensis
10549453	T	C	66	2535.77	1.00	UPSTREAM(\|4841\|\|None\|Vigan.03G102900.01), UTR_3_PRIME(\|280\|\|None\|Vigan.03G102800.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
10547985	G	GT	50	1728.73	1.00	INTRON(\|\|\|None\|Vigan.03G102800.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
10549180	(TGA)6	(TGA)5	46	2017.73	1.00	UTR_3_PRIME(\|8\|\|None\|Vigan.03G102800.01)	Vigna nepalensis