Variant information

Chr02:8677555 - 8680683

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
8677631TA501912.771.00DOWNSTREAM(|1088||None|Vigan.02G105300.01), UTR_3_PRIME(|384||None|Vigan.02G105400.01)Vigna nepalensis
8677725AG642569.771.00DOWNSTREAM(|1182||None|Vigan.02G105300.01), UTR_3_PRIME(|290||None|Vigan.02G105400.01)Vigna nepalensis
8677754TC652493.771.00DOWNSTREAM(|1211||None|Vigan.02G105300.01), UTR_3_PRIME(|261||None|Vigan.02G105400.01)Vigna nepalensis
8677990TC542379.771.00DOWNSTREAM(|1447||None|Vigan.02G105300.01), UTR_3_PRIME(|25||None|Vigan.02G105400.01)Vigna nepalensis
8677991AT532379.771.00DOWNSTREAM(|1448||None|Vigan.02G105300.01), UTR_3_PRIME(|24||None|Vigan.02G105400.01)Vigna nepalensis
8678322AG622394.771.00DOWNSTREAM(|1779||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8679024AG522127.771.00DOWNSTREAM(|2481||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8679051AG491948.771.00DOWNSTREAM(|2508||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8679111AG481845.771.00DOWNSTREAM(|2568||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8679234AG702783.771.00DOWNSTREAM(|2691||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8679366TG773063.771.00DOWNSTREAM(|2823||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8679502AC652662.771.00DOWNSTREAM(|2959||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8679649AG622499.771.00DOWNSTREAM(|3106||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8679743CT572140.771.00DOWNSTREAM(|3200||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8679990GT431563.771.00DOWNSTREAM(|3447||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8680043TC391628.771.00DOWNSTREAM(|3500||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8680058AG351406.771.00DOWNSTREAM(|3515||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8680249AG431675.771.00DOWNSTREAM(|3706||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8680406GA321274.771.00DOWNSTREAM(|3863||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8680426GA291165.771.00DOWNSTREAM(|3883||None|Vigan.02G105300.01), SYNONYMOUS_CODING(SILENT|acC/acT|T37|None|Vigan.02G105400.01)Vigna nepalensis
8680621AG451976.771.00DOWNSTREAM(|4078||None|Vigan.02G105300.01), UTR_5_PRIME(|85||None|Vigan.02G105400.01)Vigna nepalensis
8680625GC442086.771.00DOWNSTREAM(|4082||None|Vigan.02G105300.01), UTR_5_PRIME(|89||None|Vigan.02G105400.01)Vigna nepalensis
8680629AT441951.771.00DOWNSTREAM(|4086||None|Vigan.02G105300.01), UTR_5_PRIME(|93||None|Vigan.02G105400.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
8678081TTCCTGTTAATAAACTAAGATGTTATAATGTATTTCAC242106.731.00CODON_CHANGE_PLUS_CODON_INSERTION(|gga/ggGTGAAATACATTATAACATCTTAGTTTATTAACAGGa|G108G*NTL*HLSLLTG|None|Vigan.02G105400.01), DOWNSTREAM(|1539||None|Vigan.02G105300.01), SPLICE_SITE_REGION(|||None|Vigan.02G105400.01), STOP_GAINED(|gga/ggGTGAAATACATTATAACATCTTAGTTTATTAACAGGa|G108G*NTL*HLSLLTG|None|Vigan.02G105400.01)Vigna nepalensis
8678206TGT581957.731.00DOWNSTREAM(|1664||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8680288ACA451687.731.00DOWNSTREAM(|3746||None|Vigan.02G105300.01), INTRON(|||None|Vigan.02G105400.01)Vigna nepalensis
8680630AACG441942.731.00DOWNSTREAM(|4088||None|Vigan.02G105300.01), UTR_5_PRIME(|95||None|Vigan.02G105400.01)Vigna nepalensis