Variant information

Chr02:7434343 - 7438253

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 [SNPs] [Indels] [SSR-associated indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
7434426CT502022.771.00UTR_5_PRIME(|23||None|Vigan.02G093100.01)Vigna nepalensis
7434716GA451855.771.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|4793||None|Vigan.02G093200.01)Vigna nepalensis
7434876GT662579.771.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|4633||None|Vigan.02G093200.01)Vigna nepalensis
7435018TC662891.771.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|4491||None|Vigan.02G093200.01)Vigna nepalensis
7435140TA602385.771.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|4369||None|Vigan.02G093200.01)Vigna nepalensis
7435503GA421529.771.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|4006||None|Vigan.02G093200.01)Vigna nepalensis
7435522GT471755.771.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|3987||None|Vigan.02G093200.01)Vigna nepalensis
7436611CA682657.771.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|2898||None|Vigan.02G093200.01)Vigna nepalensis
7436691CT542150.771.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|2818||None|Vigan.02G093200.01)Vigna nepalensis
7436704GA501978.771.00INTRON(|||None|Vigan.02G093100.01), SPLICE_SITE_REGION(|||None|Vigan.02G093100.01), UPSTREAM(|2805||None|Vigan.02G093200.01)Vigna nepalensis
7436858CG461856.771.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|2651||None|Vigan.02G093200.01)Vigna nepalensis
7436889TA451989.771.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|2620||None|Vigan.02G093200.01)Vigna nepalensis
7436912TC592541.771.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|2597||None|Vigan.02G093200.01)Vigna nepalensis
7437237GA692773.771.00INTRON(|||None|Vigan.02G093100.01), SPLICE_SITE_REGION(|||None|Vigan.02G093100.01), UPSTREAM(|2272||None|Vigan.02G093200.01)Vigna nepalensis
7437735GA622405.771.00DOWNSTREAM(|4878||None|Vigan.02G093300.01), INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|1774||None|Vigan.02G093200.01)Vigna nepalensis
7437996TA552163.771.00DOWNSTREAM(|4617||None|Vigan.02G093300.01), UPSTREAM(|1513||None|Vigan.02G093200.01), UTR_3_PRIME(|93||None|Vigan.02G093100.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
7436629AACT572184.730.98INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|2879||None|Vigan.02G093200.01)Vigna nepalensis

SSR-associated indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
7434944(TA)28(TA)6532344.731.00INTRON(|||None|Vigan.02G093100.01), UPSTREAM(|4564||None|Vigan.02G093200.01)Vigna nepalensis