Variant information

Chr02:45076048 - 45081992

Filter



 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
45076226GT632417.771.00DOWNSTREAM(|4253||None|Vigan.02G336700.01), UPSTREAM(|2988||None|Vigan.02G336900.01), UTR_3_PRIME(|131||None|Vigan.02G336800.01)Vigna nepalensis
45076270AG702774.771.00DOWNSTREAM(|4297||None|Vigan.02G336700.01), UPSTREAM(|2944||None|Vigan.02G336900.01), UTR_3_PRIME(|87||None|Vigan.02G336800.01)Vigna nepalensis
45077105TG592301.771.00INTRON(|||None|Vigan.02G336800.01), UPSTREAM(|2109||None|Vigan.02G336900.01)Vigna nepalensis
45077165GT592281.771.00INTRON(|||None|Vigan.02G336800.01), UPSTREAM(|2049||None|Vigan.02G336900.01)Vigna nepalensis
45077308TC632884.771.00INTRON(|||None|Vigan.02G336800.01), UPSTREAM(|1906||None|Vigan.02G336900.01)Vigna nepalensis
45077314TA642843.771.00INTRON(|||None|Vigan.02G336800.01), UPSTREAM(|1900||None|Vigan.02G336900.01)Vigna nepalensis
45077380AT592248.771.00INTRON(|||None|Vigan.02G336800.01), UPSTREAM(|1834||None|Vigan.02G336900.01), UPSTREAM(|4983||None|Vigan.02G337000.01)Vigna nepalensis
45077437GA532209.771.00INTRON(|||None|Vigan.02G336800.01), UPSTREAM(|1777||None|Vigan.02G336900.01), UPSTREAM(|4926||None|Vigan.02G337000.01)Vigna nepalensis
45078105GT541440.770.72SYNONYMOUS_CODING(SILENT|ctC/ctA|L470|None|Vigan.02G336800.01), UPSTREAM(|1109||None|Vigan.02G336900.01), UPSTREAM(|4258||None|Vigan.02G337000.01)Vigna nepalensis
45078306CT853212.771.00SYNONYMOUS_CODING(SILENT|ggG/ggA|G403|None|Vigan.02G336800.01), UPSTREAM(|4057||None|Vigan.02G337000.01), UPSTREAM(|908||None|Vigan.02G336900.01)Vigna nepalensis
45078963TC692751.771.00INTRON(|||None|Vigan.02G336800.01), UPSTREAM(|251||None|Vigan.02G336900.01), UPSTREAM(|3400||None|Vigan.02G337000.01)Vigna nepalensis
45079068AG542157.771.00INTRON(|||None|Vigan.02G336800.01), UPSTREAM(|146||None|Vigan.02G336900.01), UPSTREAM(|3295||None|Vigan.02G337000.01)Vigna nepalensis
45079129CT552155.771.00INTRON(|||None|Vigan.02G336800.01), UPSTREAM(|3234||None|Vigan.02G337000.01), UPSTREAM(|85||None|Vigan.02G336900.01)Vigna nepalensis
45080023GC592611.771.00UPSTREAM(|2340||None|Vigan.02G337000.01), UTR_5_PRIME(|145||None|Vigan.02G336800.01), UTR_5_PRIME(|237||None|Vigan.02G336900.01)Vigna nepalensis
45080042CT602645.771.00START_GAINED(|||None|Vigan.02G336900.01), START_GAINED(|||None|Vigan.02G336800.01), UPSTREAM(|2321||None|Vigan.02G337000.01), UTR_5_PRIME(|164||None|Vigan.02G336800.01), UTR_5_PRIME(|218||None|Vigan.02G336900.01)Vigna nepalensis
45080265TA652825.771.00SYNONYMOUS_CODING(SILENT|gcT/gcA|A2|None|Vigan.02G336900.01), UPSTREAM(|2098||None|Vigan.02G337000.01), UTR_5_PRIME(|387||None|Vigan.02G336800.01)Vigna nepalensis
45080271TA602707.771.00NON_SYNONYMOUS_CODING(MISSENSE|aaT/aaA|N4K|None|Vigan.02G336900.01), UPSTREAM(|2092||None|Vigan.02G337000.01), UTR_5_PRIME(|393||None|Vigan.02G336800.01)Vigna nepalensis
45081414AC662453.771.00INTRON(|||None|Vigan.02G336900.01), UPSTREAM(|949||None|Vigan.02G337000.01), UTR_5_PRIME(|1536||None|Vigan.02G336800.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
45077803GCG491926.731.00INTRON(|||None|Vigan.02G336800.01), UPSTREAM(|1410||None|Vigan.02G336900.01), UPSTREAM(|4559||None|Vigan.02G337000.01)Vigna nepalensis
45080138ATA692159.731.00UPSTREAM(|2224||None|Vigan.02G337000.01), UTR_5_PRIME(|121||None|Vigan.02G336900.01), UTR_5_PRIME(|261||None|Vigan.02G336800.01)Vigna nepalensis
45080236GGCATA672984.731.00UPSTREAM(|2126||None|Vigan.02G337000.01), UTR_5_PRIME(|23||None|Vigan.02G336900.01), UTR_5_PRIME(|359||None|Vigan.02G336800.01)Vigna nepalensis
45080661ATA411107.731.00INTRON(|||None|Vigan.02G336900.01), UPSTREAM(|1701||None|Vigan.02G337000.01), UTR_5_PRIME(|784||None|Vigan.02G336800.01)Vigna nepalensis