Variant information

Chr02:43754734 - 43760549

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
43755447GA68265.770.18DOWNSTREAM(|3186||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43755476TG65376.770.25DOWNSTREAM(|3215||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43755521AG61647.770.34DOWNSTREAM(|3260||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43755540TC69608.770.28DOWNSTREAM(|3279||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43755552TC70699.770.30DOWNSTREAM(|3291||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43755602GA65248.770.17DOWNSTREAM(|3341||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43755620CA69191.770.12DOWNSTREAM(|3359||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43755872GT461804.771.00DOWNSTREAM(|3611||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43755901CT461815.771.00DOWNSTREAM(|3640||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43756194AG441719.771.00DOWNSTREAM(|3933||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43756234AG381559.771.00DOWNSTREAM(|3973||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43756276TC391556.771.00DOWNSTREAM(|4015||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43756351TG441704.771.00DOWNSTREAM(|4090||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43756955CA451681.771.00DOWNSTREAM(|4694||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43757403TC572289.771.00INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43757551GT532306.771.00INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43757564AT532289.771.00INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43757608TC572315.771.00INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43757843TC542168.771.00INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43758129TC471992.771.00INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43758190TC492177.771.00SPLICE_SITE_REGION(|||None|Vigan.02G319600.01), SYNONYMOUS_CODING(SILENT|taT/taC|Y127|None|Vigan.02G319600.01)Vigna nepalensis
43758203GT492120.771.00INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43758403CT582233.771.00INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43759286TC652523.771.00DOWNSTREAM(|4344||None|Vigan.02G319700.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43759301AT642643.771.00DOWNSTREAM(|4329||None|Vigan.02G319700.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43759459CT542202.771.00DOWNSTREAM(|4171||None|Vigan.02G319700.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
43755534AAC67543.730.27DOWNSTREAM(|3274||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43755535ATTA67579.730.25DOWNSTREAM(|3275||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43755568TTA70600.730.27DOWNSTREAM(|3308||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43755969AAAGAGGTTGAGT542640.731.00DOWNSTREAM(|3709||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43756415TTGAGG492204.731.00DOWNSTREAM(|4155||None|Vigan.02G319500.01), INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43758311GTTTTTG391668.731.00INTRON(|||None|Vigan.02G319600.01)Vigna nepalensis
43760452CCT451381.731.00DOWNSTREAM(|3177||None|Vigan.02G319700.01), UTR_3_PRIME(|240||None|Vigan.02G319600.01)Vigna nepalensis