VIGGS:Variant information

Chr02:42192169 - 42195668

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
42192183	G	A	64	2819.77	1.00	DOWNSTREAM(\|2333\|\|None\|Vigan.02G305300.01), DOWNSTREAM(\|4302\|\|None\|Vigan.02G305500.01), UTR_5_PRIME(\|254\|\|None\|Vigan.02G305400.01)	Vigna nepalensis
42192836	A	G	52	2064.77	1.00	DOWNSTREAM(\|2986\|\|None\|Vigan.02G305300.01), DOWNSTREAM(\|3649\|\|None\|Vigan.02G305500.01), INTRON(\|\|\|None\|Vigan.02G305400.01)	Vigna nepalensis
42195124	T	C	7	268.8	1.00	DOWNSTREAM(\|1361\|\|None\|Vigan.02G305500.01), NON_SYNONYMOUS_CODING(MISSENSE\|Tca/Cca\|S177P\|None\|Vigan.02G305400.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
42192178	CA	C	61	2746.73	1.00	DOWNSTREAM(\|2329\|\|None\|Vigan.02G305300.01), DOWNSTREAM(\|4306\|\|None\|Vigan.02G305500.01), UTR_5_PRIME(\|258\|\|None\|Vigan.02G305400.01)	Vigna nepalensis
42192636	C	CTT	24	1045.73	0.96	DOWNSTREAM(\|2787\|\|None\|Vigan.02G305300.01), DOWNSTREAM(\|3848\|\|None\|Vigan.02G305500.01), INTRON(\|\|\|None\|Vigan.02G305400.01)	Vigna nepalensis
42192687	A	ATT	29	1023.73	1.00	DOWNSTREAM(\|2838\|\|None\|Vigan.02G305300.01), DOWNSTREAM(\|3797\|\|None\|Vigan.02G305500.01), INTRON(\|\|\|None\|Vigan.02G305400.01)	Vigna nepalensis
42193791	A	ATAGCGGT	47	2122.73	1.00	DOWNSTREAM(\|2693\|\|None\|Vigan.02G305500.01), DOWNSTREAM(\|3942\|\|None\|Vigan.02G305300.01), INTRON(\|\|\|None\|Vigan.02G305400.01)	Vigna nepalensis
42194214	CTCTAT	C	29	325.73	0.34	DOWNSTREAM(\|2270\|\|None\|Vigan.02G305500.01), DOWNSTREAM(\|4365\|\|None\|Vigan.02G305300.01), INTRON(\|\|\|None\|Vigan.02G305400.01)	Vigna nepalensis