Variant information

Chr01:8503713 - 8506006

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
8503727AG532376.771.00UPSTREAM(|2710||None|Vigan.01G100600.01), UTR_3_PRIME(|223||None|Vigan.01G100500.01)Vigna nepalensis
8503733AT512441.771.00UPSTREAM(|2704||None|Vigan.01G100600.01), UTR_3_PRIME(|217||None|Vigan.01G100500.01)Vigna nepalensis
8503736CG522334.771.00UPSTREAM(|2701||None|Vigan.01G100600.01), UTR_3_PRIME(|214||None|Vigan.01G100500.01)Vigna nepalensis
8503768GT441694.771.00UPSTREAM(|2669||None|Vigan.01G100600.01), UTR_3_PRIME(|182||None|Vigan.01G100500.01)Vigna nepalensis
8503865TA572300.771.00UPSTREAM(|2572||None|Vigan.01G100600.01), UTR_3_PRIME(|85||None|Vigan.01G100500.01)Vigna nepalensis
8503886AG491969.771.00UPSTREAM(|2551||None|Vigan.01G100600.01), UTR_3_PRIME(|64||None|Vigan.01G100500.01)Vigna nepalensis
8503910GC511946.771.00UPSTREAM(|2527||None|Vigan.01G100600.01), UTR_3_PRIME(|40||None|Vigan.01G100500.01)Vigna nepalensis
8503953AG491879.771.00SYNONYMOUS_CODING(SILENT|ttT/ttC|F106|None|Vigan.01G100500.01), UPSTREAM(|2484||None|Vigan.01G100600.01)Vigna nepalensis
8504112AG642491.771.00SYNONYMOUS_CODING(SILENT|gaT/gaC|D53|None|Vigan.01G100500.01), UPSTREAM(|2325||None|Vigan.01G100600.01)Vigna nepalensis
8504351CT592634.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|2086||None|Vigan.01G100600.01)Vigna nepalensis
8504593CT592378.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1844||None|Vigan.01G100600.01)Vigna nepalensis
8504646TC652525.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1791||None|Vigan.01G100600.01)Vigna nepalensis
8504672TG672674.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1765||None|Vigan.01G100600.01)Vigna nepalensis
8504776TC401643.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1661||None|Vigan.01G100600.01)Vigna nepalensis
8504821GC481889.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1616||None|Vigan.01G100600.01)Vigna nepalensis
8504916TC562257.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1521||None|Vigan.01G100600.01)Vigna nepalensis
8504938TC501940.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1499||None|Vigan.01G100600.01)Vigna nepalensis
8504978CA481966.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1459||None|Vigan.01G100600.01)Vigna nepalensis
8505046TA441719.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1391||None|Vigan.01G100600.01)Vigna nepalensis
8505253AC521836.770.98INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1184||None|Vigan.01G100600.01)Vigna nepalensis
8505376AC652831.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1061||None|Vigan.01G100600.01)Vigna nepalensis
8505391AT592698.771.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1046||None|Vigan.01G100600.01)Vigna nepalensis
8505669AC371485.771.00START_GAINED(|||None|Vigan.01G100500.01), UPSTREAM(|768||None|Vigan.01G100600.01), UTR_5_PRIME(|128||None|Vigan.01G100500.01)Vigna nepalensis
8505809CG622450.771.00UPSTREAM(|628||None|Vigan.01G100600.01), UTR_5_PRIME(|268||None|Vigan.01G100500.01)Vigna nepalensis
8505906TA602747.771.00UPSTREAM(|531||None|Vigan.01G100600.01), UTR_5_PRIME(|365||None|Vigan.01G100500.01)Vigna nepalensis
8505928TC562516.771.00START_GAINED(|||None|Vigan.01G100500.01), UPSTREAM(|509||None|Vigan.01G100600.01), UTR_5_PRIME(|387||None|Vigan.01G100500.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
8503729AAT522502.731.00UPSTREAM(|2707||None|Vigan.01G100600.01), UTR_3_PRIME(|220||None|Vigan.01G100500.01)Vigna nepalensis
8504343AAATGTTTCATAAAAGAGTGTAAAGCATC573466.731.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|2093||None|Vigan.01G100600.01)Vigna nepalensis
8504863ATA541890.731.00INTRON(|||None|Vigan.01G100500.01), UPSTREAM(|1573||None|Vigan.01G100600.01)Vigna nepalensis
8505578GGA411264.731.00UPSTREAM(|858||None|Vigan.01G100600.01), UTR_5_PRIME(|38||None|Vigan.01G100500.01)Vigna nepalensis
8505904CGC582693.731.00UPSTREAM(|532||None|Vigan.01G100600.01), UTR_5_PRIME(|364||None|Vigan.01G100500.01)Vigna nepalensis