Variant information

Chr01:66642454 - 66645910

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
66642591CG582211.771.00DOWNSTREAM(|1084||None|Vigan.01G547500.01), DOWNSTREAM(|3803||None|Vigan.01G547700.01), START_GAINED(|||None|Vigan.01G547600.01), UPSTREAM(|4518||None|Vigan.01G547400.01), UTR_5_PRIME(|252||None|Vigan.01G547600.01)Vigna nepalensis
66642636TA632765.771.00DOWNSTREAM(|1129||None|Vigan.01G547500.01), DOWNSTREAM(|3758||None|Vigan.01G547700.01), UPSTREAM(|4563||None|Vigan.01G547400.01), UTR_5_PRIME(|207||None|Vigan.01G547600.01)Vigna nepalensis
66642637CA632765.771.00DOWNSTREAM(|1130||None|Vigan.01G547500.01), DOWNSTREAM(|3757||None|Vigan.01G547700.01), UPSTREAM(|4564||None|Vigan.01G547400.01), UTR_5_PRIME(|206||None|Vigan.01G547600.01)Vigna nepalensis
66642681AG612376.771.00DOWNSTREAM(|1174||None|Vigan.01G547500.01), DOWNSTREAM(|3713||None|Vigan.01G547700.01), UPSTREAM(|4608||None|Vigan.01G547400.01), UTR_5_PRIME(|162||None|Vigan.01G547600.01)Vigna nepalensis
66642702GA542212.771.00DOWNSTREAM(|1195||None|Vigan.01G547500.01), DOWNSTREAM(|3692||None|Vigan.01G547700.01), UPSTREAM(|4629||None|Vigan.01G547400.01), UTR_5_PRIME(|141||None|Vigan.01G547600.01)Vigna nepalensis
66642852GC542253.771.00DOWNSTREAM(|1345||None|Vigan.01G547500.01), DOWNSTREAM(|3542||None|Vigan.01G547700.01), NON_SYNONYMOUS_CODING(MISSENSE|Gac/Cac|D4H|None|Vigan.01G547600.01), UPSTREAM(|4779||None|Vigan.01G547400.01)Vigna nepalensis
66642872CG381654.771.00DOWNSTREAM(|1365||None|Vigan.01G547500.01), DOWNSTREAM(|3522||None|Vigan.01G547700.01), NON_SYNONYMOUS_CODING(MISSENSE|ttC/ttG|F10L|None|Vigan.01G547600.01), UPSTREAM(|4799||None|Vigan.01G547400.01)Vigna nepalensis
66643055TC712611.771.00DOWNSTREAM(|1548||None|Vigan.01G547500.01), DOWNSTREAM(|3339||None|Vigan.01G547700.01), INTRON(|||None|Vigan.01G547600.01), UPSTREAM(|4982||None|Vigan.01G547400.01)Vigna nepalensis
66643327AG552171.771.00DOWNSTREAM(|1820||None|Vigan.01G547500.01), DOWNSTREAM(|3067||None|Vigan.01G547700.01), INTRON(|||None|Vigan.01G547600.01)Vigna nepalensis
66644499GC562281.771.00DOWNSTREAM(|1895||None|Vigan.01G547700.01), DOWNSTREAM(|2992||None|Vigan.01G547500.01), INTRON(|||None|Vigan.01G547600.01)Vigna nepalensis
66645727CT712798.771.00DOWNSTREAM(|4220||None|Vigan.01G547500.01), DOWNSTREAM(|667||None|Vigan.01G547700.01), UTR_3_PRIME(|109||None|Vigan.01G547600.01)Vigna nepalensis
66645750GA612458.771.00DOWNSTREAM(|4243||None|Vigan.01G547500.01), DOWNSTREAM(|644||None|Vigan.01G547700.01), UTR_3_PRIME(|132||None|Vigan.01G547600.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
66644195CCTATT653092.731.00DOWNSTREAM(|2198||None|Vigan.01G547700.01), DOWNSTREAM(|2689||None|Vigan.01G547500.01), INTRON(|||None|Vigan.01G547600.01)Vigna nepalensis
66645903AATA512192.731.00DOWNSTREAM(|4397||None|Vigan.01G547500.01), DOWNSTREAM(|490||None|Vigan.01G547700.01), UTR_3_PRIME(|286||None|Vigan.01G547600.01)Vigna nepalensis