Variant information

Chr01:59651090 - 59653332

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
59651166AG451762.771.00UTR_3_PRIME(|497||None|Vigan.01G467000.01)Vigna nepalensis
59651535TA471867.771.00UTR_3_PRIME(|128||None|Vigan.01G467000.01)Vigna nepalensis
59651862AG491909.771.00NON_SYNONYMOUS_CODING(MISSENSE|gTa/gCa|V228A|None|Vigan.01G467000.01)Vigna nepalensis
59651889GT491890.771.00NON_SYNONYMOUS_CODING(MISSENSE|cCc/cAc|P219H|None|Vigan.01G467000.01)Vigna nepalensis
59652068CT451709.771.00SYNONYMOUS_CODING(SILENT|caG/caA|Q159|None|Vigan.01G467000.01)Vigna nepalensis
59652146TC461887.771.00INTRON(|||None|Vigan.01G467000.01)Vigna nepalensis
59652207CT441730.771.00INTRON(|||None|Vigan.01G467000.01)Vigna nepalensis
59652289CT411536.771.00INTRON(|||None|Vigan.01G467000.01)Vigna nepalensis
59652605AG491947.771.00NON_SYNONYMOUS_CODING(MISSENSE|aTg/aCg|M149T|None|Vigan.01G467000.01), SPLICE_SITE_REGION(|||None|Vigan.01G467000.01)Vigna nepalensis
59652666TG542065.771.00SYNONYMOUS_CODING(SILENT|Aga/Cga|R129|None|Vigan.01G467000.01)Vigna nepalensis
59652790CT582568.771.00SYNONYMOUS_CODING(SILENT|gaG/gaA|E87|None|Vigan.01G467000.01)Vigna nepalensis
59652796TC592574.771.00SYNONYMOUS_CODING(SILENT|gaA/gaG|E85|None|Vigan.01G467000.01)Vigna nepalensis
59652851CA532009.771.00INTRON(|||None|Vigan.01G467000.01)Vigna nepalensis
59652867GA532443.771.00INTRON(|||None|Vigan.01G467000.01)Vigna nepalensis
59652874TG552436.771.00INTRON(|||None|Vigan.01G467000.01)Vigna nepalensis
59652918AG411614.771.00INTRON(|||None|Vigan.01G467000.01)Vigna nepalensis
59652955AG411510.771.00SYNONYMOUS_CODING(SILENT|ggT/ggC|G70|None|Vigan.01G467000.01)Vigna nepalensis
59652969GC381724.771.00NON_SYNONYMOUS_CODING(MISSENSE|Cct/Gct|P66A|None|Vigan.01G467000.01)Vigna nepalensis
59652976AG401805.771.00SYNONYMOUS_CODING(SILENT|gaT/gaC|D63|None|Vigan.01G467000.01)Vigna nepalensis
59653018GA271064.771.00SYNONYMOUS_CODING(SILENT|aaC/aaT|N49|None|Vigan.01G467000.01)Vigna nepalensis
59653157CG451688.771.00NON_SYNONYMOUS_CODING(MISSENSE|cGt/cCt|R3P|None|Vigan.01G467000.01)Vigna nepalensis
59653243TC672924.771.00UTR_5_PRIME(|79||None|Vigan.01G467000.01)Vigna nepalensis
59653261GA693046.771.00UTR_5_PRIME(|97||None|Vigan.01G467000.01)Vigna nepalensis
59653314CT602316.771.00UTR_5_PRIME(|150||None|Vigan.01G467000.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
59651335GAAG542125.731.00UTR_3_PRIME(|326||None|Vigan.01G467000.01)Vigna nepalensis
59652386GTG532107.731.00INTRON(|||None|Vigan.01G467000.01)Vigna nepalensis
59652466ATTA481861.731.00INTRON(|||None|Vigan.01G467000.01)Vigna nepalensis
59652868AAC532434.731.00INTRON(|||None|Vigan.01G467000.01)Vigna nepalensis