Variant information

Chr01:55146128 - 55151919

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
55146217AT431875.771.00DOWNSTREAM(|603||None|Vigan.01G415300.01), UTR_3_PRIME(|419||None|Vigan.01G415400.01)Vigna nepalensis
55146234AC431909.771.00DOWNSTREAM(|620||None|Vigan.01G415300.01), UTR_3_PRIME(|402||None|Vigan.01G415400.01)Vigna nepalensis
55146872TG442034.771.00DOWNSTREAM(|1258||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55147085AT421695.771.00DOWNSTREAM(|1471||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55147261AC522046.771.00DOWNSTREAM(|1647||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55147471AG582257.771.00DOWNSTREAM(|1857||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55147560GA491951.771.00DOWNSTREAM(|1946||None|Vigan.01G415300.01), SYNONYMOUS_CODING(SILENT|ttC/ttT|F327|None|Vigan.01G415400.01)Vigna nepalensis
55147721AT582266.771.00DOWNSTREAM(|2107||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55147889TA421707.771.00DOWNSTREAM(|2275||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55148430CT592104.770.98DOWNSTREAM(|2816||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55148727AG562204.771.00DOWNSTREAM(|3113||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55148739TC602375.771.00DOWNSTREAM(|3125||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55149072TA461750.771.00DOWNSTREAM(|3458||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55149185TC512017.771.00DOWNSTREAM(|3571||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55149617TA542205.771.00DOWNSTREAM(|4003||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55149696CA602395.771.00DOWNSTREAM(|4082||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55149801CT562195.771.00DOWNSTREAM(|4187||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55149877CA632486.771.00DOWNSTREAM(|4263||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55150297AG582279.771.00DOWNSTREAM(|4683||None|Vigan.01G415300.01), NON_SYNONYMOUS_CODING(MISSENSE|cTa/cCa|L190P|None|Vigan.01G415400.01)Vigna nepalensis
55150493TC351293.771.00DOWNSTREAM(|4879||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55150748GC662689.771.00INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55150791TG632523.771.00INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55150965CT421655.771.00NON_SYNONYMOUS_CODING(MISSENSE|Gat/Aat|D99N|None|Vigan.01G415400.01)Vigna nepalensis
55151143AG532098.771.00SYNONYMOUS_CODING(SILENT|gaT/gaC|D39|None|Vigan.01G415400.01)Vigna nepalensis
55151176AT612441.771.00INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55151237GT542356.771.00INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55151243TG482341.771.00INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55151388CT491963.771.00INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55151442TA572184.771.00INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55151531AG471826.771.00NON_SYNONYMOUS_CODING(MISSENSE|Tgc/Cgc|C21R|None|Vigan.01G415400.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
55146871AACGG462025.731.00DOWNSTREAM(|1258||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55146996TAT561683.731.00DOWNSTREAM(|1383||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55147289CAC562058.731.00DOWNSTREAM(|1676||None|Vigan.01G415300.01), INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis
55151569TTATAAGAATAAC512405.731.00INTRON(|||None|Vigan.01G415400.01)Vigna nepalensis