Variant information

Chr01:54925677 - 54928557

Filter



 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
54925855AT24901.771.00UPSTREAM(|2476||None|Vigan.01G411800.01), UTR_3_PRIME(|47||None|Vigan.01G411900.01)Vigna nepalensis
54926068AG582284.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|2689||None|Vigan.01G411800.01)Vigna nepalensis
54926155CT481832.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|2776||None|Vigan.01G411800.01)Vigna nepalensis
54926204CA492138.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|2825||None|Vigan.01G411800.01)Vigna nepalensis
54926274CG471936.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|2895||None|Vigan.01G411800.01)Vigna nepalensis
54926337GC542183.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|2958||None|Vigan.01G411800.01)Vigna nepalensis
54926514CT702692.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3135||None|Vigan.01G411800.01)Vigna nepalensis
54926727AT481991.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3348||None|Vigan.01G411800.01)Vigna nepalensis
54926798GA532359.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3419||None|Vigan.01G411800.01)Vigna nepalensis
54926802AG522359.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3423||None|Vigan.01G411800.01)Vigna nepalensis
54926897AC542132.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3518||None|Vigan.01G411800.01)Vigna nepalensis
54926969CA532351.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3590||None|Vigan.01G411800.01)Vigna nepalensis
54926970AT532351.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3591||None|Vigan.01G411800.01)Vigna nepalensis
54927043AG441775.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3664||None|Vigan.01G411800.01)Vigna nepalensis
54927068AG441794.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3689||None|Vigan.01G411800.01)Vigna nepalensis
54927153CG582372.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3774||None|Vigan.01G411800.01)Vigna nepalensis
54927330TC662569.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3951||None|Vigan.01G411800.01)Vigna nepalensis
54927367CT632440.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3988||None|Vigan.01G411800.01)Vigna nepalensis
54927520AT753042.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|4141||None|Vigan.01G411800.01), UPSTREAM(|4979||None|Vigan.01G412000.01)Vigna nepalensis
54927610CG562296.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|4231||None|Vigan.01G411800.01), UPSTREAM(|4889||None|Vigan.01G412000.01)Vigna nepalensis
54927680TA642546.771.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|4301||None|Vigan.01G411800.01), UPSTREAM(|4819||None|Vigan.01G412000.01)Vigna nepalensis
54927821GA511941.771.00SYNONYMOUS_CODING(SILENT|acC/acT|T105|None|Vigan.01G411900.01), UPSTREAM(|4442||None|Vigan.01G411800.01), UPSTREAM(|4678||None|Vigan.01G412000.01)Vigna nepalensis
54928147GA361414.771.00SYNONYMOUS_CODING(SILENT|ttC/ttT|F52|None|Vigan.01G411900.01), UPSTREAM(|4352||None|Vigan.01G412000.01), UPSTREAM(|4768||None|Vigan.01G411800.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
54926190CCG512209.731.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|2812||None|Vigan.01G411800.01)Vigna nepalensis
54926521TTGCT693060.731.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3143||None|Vigan.01G411800.01)Vigna nepalensis
54926827TAT501438.731.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3449||None|Vigan.01G411800.01)Vigna nepalensis
54927020GCTCATACTAAGCG351532.731.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3642||None|Vigan.01G411800.01)Vigna nepalensis
54927247GCGAAATGTTTTG632770.731.00INTRON(|||None|Vigan.01G411900.01), UPSTREAM(|3869||None|Vigan.01G411800.01)Vigna nepalensis
54928457AATCGTCATT431987.731.00UPSTREAM(|4041||None|Vigan.01G412000.01), UTR_5_PRIME(|65||None|Vigan.01G411900.01)Vigna nepalensis