Variant information

Chr01:49466299 - 49467671

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
49466398AG592594.771.00UTR_3_PRIME(|384||None|Vigan.01G360000.01)Vigna nepalensis
49466416CG582597.771.00UTR_3_PRIME(|366||None|Vigan.01G360000.01)Vigna nepalensis
49466496CT522275.771.00UTR_3_PRIME(|286||None|Vigan.01G360000.01)Vigna nepalensis
49466515TG542485.771.00UTR_3_PRIME(|267||None|Vigan.01G360000.01)Vigna nepalensis
49466532TC472115.771.00UTR_3_PRIME(|250||None|Vigan.01G360000.01)Vigna nepalensis
49466629TA502316.771.00UTR_3_PRIME(|153||None|Vigan.01G360000.01)Vigna nepalensis
49466640AC481865.771.00UTR_3_PRIME(|142||None|Vigan.01G360000.01)Vigna nepalensis
49466899AG572277.771.00DOWNSTREAM(|4884||None|Vigan.01G360100.01), SYNONYMOUS_CODING(SILENT|agT/agC|S78|None|Vigan.01G360000.01)Vigna nepalensis
49466969AT451682.771.00DOWNSTREAM(|4814||None|Vigan.01G360100.01), NON_SYNONYMOUS_CODING(MISSENSE|tTc/tAc|F55Y|None|Vigan.01G360000.01)Vigna nepalensis
49467095AT451746.771.00DOWNSTREAM(|4688||None|Vigan.01G360100.01), INTRON(|||None|Vigan.01G360000.01)Vigna nepalensis
49467380GC532124.771.00DOWNSTREAM(|4403||None|Vigan.01G360100.01), UTR_5_PRIME(|117||None|Vigan.01G360000.01)Vigna nepalensis
49467631AG492273.771.00DOWNSTREAM(|4152||None|Vigan.01G360100.01), UTR_5_PRIME(|368||None|Vigan.01G360000.01)Vigna nepalensis
49467647AT502221.771.00DOWNSTREAM(|4136||None|Vigan.01G360100.01), START_GAINED(|||None|Vigan.01G360000.01), UTR_5_PRIME(|384||None|Vigan.01G360000.01)Vigna nepalensis
49467667TC502180.771.00DOWNSTREAM(|4116||None|Vigan.01G360100.01), UTR_5_PRIME(|404||None|Vigan.01G360000.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
49466352TTC642899.731.00UTR_3_PRIME(|429||None|Vigan.01G360000.01)Vigna nepalensis
49466353ATAATA642938.731.00UTR_3_PRIME(|425||None|Vigan.01G360000.01)Vigna nepalensis
49466359ATA622836.731.00UTR_3_PRIME(|422||None|Vigan.01G360000.01)Vigna nepalensis
49466625TTTTCCAATTCACGGGTATCAA582948.731.00UTR_3_PRIME(|156||None|Vigan.01G360000.01)Vigna nepalensis
49467523CTATGCCCTGCCTCCTTTTC512242.731.00DOWNSTREAM(|4259||None|Vigan.01G360100.01), UTR_5_PRIME(|261||None|Vigan.01G360000.01)Vigna nepalensis