Variant information

Chr01:49413793 - 49417048

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
49413973CT481911.771.00UPSTREAM(|4032||None|Vigan.01G359300.01), UPSTREAM(|4814||None|Vigan.01G359500.01), UTR_5_PRIME(|146||None|Vigan.01G359400.01)Vigna nepalensis
49414453AG491946.771.00INTRON(|||None|Vigan.01G359400.01), UPSTREAM(|4334||None|Vigan.01G359500.01), UPSTREAM(|4512||None|Vigan.01G359300.01)Vigna nepalensis
49414499CT421676.771.00INTRON(|||None|Vigan.01G359400.01), UPSTREAM(|4288||None|Vigan.01G359500.01), UPSTREAM(|4558||None|Vigan.01G359300.01)Vigna nepalensis
49414730TA471815.771.00INTRON(|||None|Vigan.01G359400.01), UPSTREAM(|4057||None|Vigan.01G359500.01), UPSTREAM(|4789||None|Vigan.01G359300.01)Vigna nepalensis
49415579TA672703.771.00INTRON(|||None|Vigan.01G359400.01), UPSTREAM(|3208||None|Vigan.01G359500.01)Vigna nepalensis
49415845AG481869.771.00INTRON(|||None|Vigan.01G359400.01), UPSTREAM(|2942||None|Vigan.01G359500.01)Vigna nepalensis
49416208GA682553.771.00SYNONYMOUS_CODING(SILENT|aaG/aaA|K107|None|Vigan.01G359400.01), UPSTREAM(|2579||None|Vigan.01G359500.01)Vigna nepalensis
49416286GA622412.771.00SYNONYMOUS_CODING(SILENT|aaG/aaA|K133|None|Vigan.01G359400.01), UPSTREAM(|2501||None|Vigan.01G359500.01)Vigna nepalensis
49416484AG572265.771.00INTRON(|||None|Vigan.01G359400.01), UPSTREAM(|2303||None|Vigan.01G359500.01)Vigna nepalensis
49416712CT582341.771.00UPSTREAM(|2075||None|Vigan.01G359500.01), UTR_3_PRIME(|107||None|Vigan.01G359400.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
49414335TTCT492184.731.00INTRON(|||None|Vigan.01G359400.01), UPSTREAM(|4395||None|Vigan.01G359300.01), UPSTREAM(|4451||None|Vigan.01G359500.01)Vigna nepalensis
49414345TTACTGA502256.731.00INTRON(|||None|Vigan.01G359400.01), UPSTREAM(|4405||None|Vigan.01G359300.01), UPSTREAM(|4441||None|Vigan.01G359500.01)Vigna nepalensis
49416330TTTA662904.731.00INTRON(|||None|Vigan.01G359400.01), SPLICE_SITE_REGION(|||None|Vigan.01G359400.01), UPSTREAM(|2456||None|Vigan.01G359500.01)Vigna nepalensis
49416375TAT642552.731.00INTRON(|||None|Vigan.01G359400.01), UPSTREAM(|2411||None|Vigan.01G359500.01)Vigna nepalensis
49416683TTAAC502205.731.00UPSTREAM(|2103||None|Vigan.01G359500.01), UTR_3_PRIME(|79||None|Vigan.01G359400.01)Vigna nepalensis