Variant information

Chr01:48869112 - 48873519

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
48869131CG582361.771.00UTR_5_PRIME(|522||None|Vigan.01G353900.01)Vigna nepalensis
48869194CT481825.771.00UTR_5_PRIME(|459||None|Vigan.01G353900.01)Vigna nepalensis
48869281GT481902.771.00UTR_5_PRIME(|372||None|Vigan.01G353900.01)Vigna nepalensis
48869386CG411642.771.00UTR_5_PRIME(|267||None|Vigan.01G353900.01)Vigna nepalensis
48870144TC481839.771.00SYNONYMOUS_CODING(SILENT|cgT/cgC|R164|None|Vigan.01G353900.01)Vigna nepalensis
48870352AG501848.771.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48870432AG491911.771.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48870672CT391497.771.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48871353AG642593.771.00SYNONYMOUS_CODING(SILENT|ttA/ttG|L370|None|Vigan.01G353900.01)Vigna nepalensis
48871703TC512040.771.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48872528CG532007.771.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48872574CT662603.771.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48872895CG532167.771.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48873468GA622495.771.00UPSTREAM(|4956||None|Vigan.01G354000.01), UTR_3_PRIME(|352||None|Vigan.01G353900.01)Vigna nepalensis
48873515AT602340.771.00UPSTREAM(|4909||None|Vigan.01G354000.01), UTR_3_PRIME(|399||None|Vigan.01G353900.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
48870464TTTTTG451860.731.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48870839TAGTCATTACAT351541.731.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48871901TTTC582547.731.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48872055CCTT763226.071.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48872646GTG582304.731.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis
48872729TAT602000.731.00INTRON(|||None|Vigan.01G353900.01)Vigna nepalensis