Variant information

Chr01:47393458 - 47398842

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
47393561TC461872.771.00UPSTREAM(|3041||None|Vigan.01G341400.01), UTR_3_PRIME(|400||None|Vigan.01G341500.01)Vigna nepalensis
47393668TA572143.771.00UPSTREAM(|3148||None|Vigan.01G341400.01), UTR_3_PRIME(|293||None|Vigan.01G341500.01)Vigna nepalensis
47394259AC652625.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|3739||None|Vigan.01G341400.01)Vigna nepalensis
47394308CT592371.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|3788||None|Vigan.01G341400.01)Vigna nepalensis
47394464AG682817.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|3944||None|Vigan.01G341400.01)Vigna nepalensis
47394650GT713221.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|4130||None|Vigan.01G341400.01)Vigna nepalensis
47394656CG783422.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|4136||None|Vigan.01G341400.01)Vigna nepalensis
47394733AG742953.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|4213||None|Vigan.01G341400.01)Vigna nepalensis
47394823CT602445.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|4303||None|Vigan.01G341400.01)Vigna nepalensis
47394883AC602366.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|4363||None|Vigan.01G341400.01)Vigna nepalensis
47395203AG471917.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|4683||None|Vigan.01G341400.01)Vigna nepalensis
47395216AC512041.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|4696||None|Vigan.01G341400.01)Vigna nepalensis
47395302TC542128.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|4782||None|Vigan.01G341400.01)Vigna nepalensis
47395487TC522031.771.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|4967||None|Vigan.01G341400.01)Vigna nepalensis
47395591AC652487.771.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47396053AG723222.771.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47396057AT703230.771.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47396063TC723230.771.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47396472GA441711.771.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47397148TA632517.771.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47397683AG431674.771.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47398191TG371468.771.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47398269CG502048.771.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47398388GA572161.771.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47398468GA421670.771.00SYNONYMOUS_CODING(SILENT|gcC/gcT|A34|None|Vigan.01G341500.01)Vigna nepalensis
47398518GA441809.771.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47398744TC521927.771.00UTR_5_PRIME(|80||None|Vigan.01G341500.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
47394686CATC672927.731.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|4167||None|Vigan.01G341400.01)Vigna nepalensis
47395350CAC461672.731.00INTRON(|||None|Vigan.01G341500.01), UPSTREAM(|4831||None|Vigan.01G341400.01)Vigna nepalensis
47395546TTC592127.731.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47396023CCA561846.731.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47396267TTA732412.731.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47397219ACA592325.731.00INTRON(|||None|Vigan.01G341500.01)Vigna nepalensis
47398721AAAAACGTGAAAGAAAGCGT442521.731.00UTR_5_PRIME(|58||None|Vigan.01G341500.01)Vigna nepalensis