Variant information

Chr01:16986808 - 16996487

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
16986890GA572257.771.00UTR_5_PRIME(|159||None|Vigan.01G155900.01)Vigna nepalensis
16987252AG522035.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16987322CG441621.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16987906AT502000.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16988678GC632513.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16988699GA642580.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16989292AC532042.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16989369TC471849.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16989430GT461899.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16989601GT552283.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16989653TG562224.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16989900TA582433.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16989952AG632473.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16989995CT632837.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16990001GT622810.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16990074AT652504.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16990692GA462020.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16990698TC462097.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16990738AT532342.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16990752TA492147.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16991985TG572409.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16992209AT582388.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16992425TG742939.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16992460CG722859.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16992761GC552329.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16992854GA542143.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16993160AC431703.771.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16993287AG642643.771.00DOWNSTREAM(|4937||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01), SPLICE_SITE_REGION(|||None|Vigan.01G155900.01)Vigna nepalensis
16993429GC532222.771.00DOWNSTREAM(|4795||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16994070GA472136.771.00DOWNSTREAM(|4154||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16994088GA552387.771.00DOWNSTREAM(|4136||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16994140AG532225.771.00DOWNSTREAM(|4084||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16994603GA783088.771.00DOWNSTREAM(|3621||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16994698GA572241.771.00DOWNSTREAM(|3526||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16994824AG652473.771.00DOWNSTREAM(|3400||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16995055AG552196.771.00DOWNSTREAM(|3169||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16995219GA532346.771.00DOWNSTREAM(|3005||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16995220CG532385.771.00DOWNSTREAM(|3004||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16995222CT522385.771.00DOWNSTREAM(|3002||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16996353GA562217.771.00DOWNSTREAM(|1871||None|Vigan.01G156000.01), UTR_3_PRIME(|415||None|Vigan.01G155900.01)Vigna nepalensis
16996447GT502032.771.00DOWNSTREAM(|1777||None|Vigan.01G156000.01), UTR_3_PRIME(|509||None|Vigan.01G155900.01)Vigna nepalensis
16996478GT532118.771.00DOWNSTREAM(|1746||None|Vigan.01G156000.01), UTR_3_PRIME(|540||None|Vigan.01G155900.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
16989138AATGATCTATGTAGC572925.731.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16989164CCTGT582570.731.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16990604ATA581701.731.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16990994GAG561788.731.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16991038GGA441396.731.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16991161AATT592327.731.00INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16993365CCTCTT472039.731.00DOWNSTREAM(|4858||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16994933AAAT662929.731.00DOWNSTREAM(|3290||None|Vigan.01G156000.01), INTRON(|||None|Vigan.01G155900.01)Vigna nepalensis
16996370AGCAATGA502213.731.00DOWNSTREAM(|1853||None|Vigan.01G156000.01), UTR_3_PRIME(|433||None|Vigan.01G155900.01)Vigna nepalensis