GBrowse Details

Vigan.11G249700.01

Basic Information:
Name: Vigan.11G249700.01
Multiple alignment
Variant Information
Position: Chr11:37224475..37228037 (+ strand)
Length: 3563
Functional Information:
Description: Similar to methyltransferase-like protein 5-like. [XP_004513013.1, Cicer arietinum]
GO: Biological Process: methylation (GO:0032259)
Molecular Function: nucleic acid binding (GO:0003676)
Molecular Function: methyltransferase activity (GO:0008168)
InterPro: DNA methylase, N-6 adenine-specific, conserved site (IPR002052)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:26.88,13.72,15.56,19.47,18.69,18.80,21.26,16.04
Arabidopsis thaliana homolog: AT4G28830.1
Structure :
Position: Chr11:37224475..37224526 (+ strand)
Length: 52
Type: five_prime_UTR
Position: Chr11:37224527..37224586 (+ strand)
Length: 60
Type: CDS
Position: Chr11:37224710..37224766 (+ strand)
Length: 57
Type: CDS
Position: Chr11:37225263..37225360 (+ strand)
Length: 98
Type: CDS
Position: Chr11:37225559..37225628 (+ strand)
Length: 70
Type: CDS
Position: Chr11:37225870..37225918 (+ strand)
Length: 49
Type: CDS
Position: Chr11:37226461..37226549 (+ strand)
Length: 89
Type: CDS
Position: Chr11:37226636..37226683 (+ strand)
Length: 48
Type: CDS
Position: Chr11:37227279..37227338 (+ strand)
Length: 60
Type: CDS
Position: Chr11:37227571..37227693 (+ strand)
Length: 123
Type: CDS
Position: Chr11:37227694..37228037 (+ strand)
Length: 344
Type: three_prime_UTR

>Vigan.11G249700.01 class=Sequence position=Chr11:37224475..37228037 (+ strand)
TAGAAAATTT AGGCAGAAGA AAAAATGGCA GTGAAAGTTT GAATCGGAAA AGATGAAGCT GAAGCAGTTG GAAGGCCTTC
TTGGTGGTCT CCAGCAGTTC CCTCAACCCA AGGTAAATCT TTCTCCTTTC TCTCAAACTT TCCACCATCT CACTTCCTTT
TCTGAATTAT GATTATCACA TTAACATTGG TCACTCACTT CTTCCTTGTT TGTGGTTGTG GCTTATGGCA TGCAGGTGGA
GCTTGAACAG TATCCAACGG GACCCCATAT TGCTTCCCGA ATGCTTTTCA CTGTGTTCCC TCATTCCCTT TATTCGCAAT
CCTTTTTTAT TTCAGTCTCC CTTCTATCTT TACTCATCAA ATTTGCTAAA GTTGGATTCT TTTGCCTTAT ATCATGTTCA
TCTTGCTTTG GTCGTTAATG GGTGTTTTTT AGAGTTTGTC TGTTTGTGGA ATTTGGTCAG CCTAGTATAT GCAGTGCAAC
CTGTGTTGGT CACAATTGCT TGTGTGATGA TGTGATTGGG AACATTTAGT TATGATTCTT GTTTGTGACA ATTTTGATTG
GCTTTTGGGT TTTAAGACCG TCTTTGGGGC ATTTGCTTGC AGTTCTGTGG TATGGATCAG GGAAATATGG GGAGGGTATT
TTAAGAAATC AATTCAATTG TGTGCGAGTG TGTGTGTGTG TGTGTGTGGA TTTGCAAAAT ATGTAGGGAA TAGTTTTTGG
GTTGTGAAAT AGTTATAGTA ATTTCCACTT TGTTAAAGTT GTGTTCCTTT GCTGTTCATG AGAATCAGGC AGAGAATTCT
TTTGGGGATG TGAGCAACAA AGTAGTGGCT GACTTTGGAT GCGGCTGTGG TACGTTAGGT GTTGCAGCTG CCCTTTTGAG
TGCAGAGTGA GTTGCATCTT TCCCTGCCTA CTTTATGTTT CTCATTCCCT TACTTTTTTA TTGTTACCTA ACCTGAATCA
GAGTGGAGAT TAGAATCACA GTATGGCTAT TACAAAATTT TGAATTTCGT GATTTTTAAA TCAAATGAGA TGCTTTTGTA
TTACTGTATC TAATATTCTC TTGACTTTTC TTAGCATTGA TCAGACATGT TCTCAGCATT GACATTGATC CAGAATCTCT
TGAAGTAGCT TCTGTTAATG CAGAGGAACT TGAGGTACTG TCTTTCTGCC TATTGTTATG GTTTCGATTT TCAATTACTG
AGTCTGTTAT TTGAGAAAAG GAATAATAAT TTTCTGTTTG TTTTGAATAT TAACATAAAA CTGGAATAAC AGGATATGAA
TAGTATTCTT TAGATGCAAA GAATAAATTG TTTTTATCAA ATTCAATGAT TATGTTAAAG TTGACTACTG ATGACTGATG
CACAACATTC CTTTGTTATT CTATTGAAAC TGCAGCTTGA TATCGATTTT ATTCGGTCTA ATGTCTTGGA TTTGGGATGG
AGAGGTAGCT TTCCACGTCA TCTCTTTCTT AGAATACCAT AACATTATAC AATTTTGCTT CTTGAGGAAA TATTGTTGAT
GGGTACATGC AACGTAACTT TTATCTTTGA AGTTTGCAAT TATTATTGGG CTTTTGGAGC AACACCAGTT TGAATGAAAG
CTTGTTGCGT GGTGCAATTT ACTGATCTCC CCACCTTTCC GCAAAATTTC TTTTTCCTCT CCAAGATGCT TATAATTATG
GCTCTAGAAA CTATAATTCA GAGTTAATTG ATTAAACTGT GTTTCTGGTT TGAATCCTTA GTCCTTAGTT CCTAAAGTAA
CATGCATATT CTTTATGCAT CATTTATATG ACTCATGGAC ATTGTATGTT ATTTACAAGT ATCTCATTTA TCAATGACTT
GTTCTAGTTG CTGCGAAACA AAATGTTCAA GTGAACCATT CACCGATTTA AGGGGAAAGC TGGATAAAAA AAATTCTAAT
TCTTGATTTT ACGTGTTGCT GAATTTTTTC CTCCTACAAA CTCATGGTTA TCTTGGTATT CTCTAGGTTC AATTGTTGAT
ACAGTTATAA TGAATCCTCC ATTTGGTACT CGTAAAAAAG GTGCAGATTT GGATTTTCTC TCTGTTGCTT TGAAGGTAAG
CAAAAACATC AAAGCTTGGT AATAAACGCA GGACTGATGG AAATTCTAAT ATTACCTATG TACCATATAT TGCTTTGTCA
GGTTGCTTCT CAAGCTGTTT ATTCCTTGCA TAAGACTTCA ACAAGAGATG TAAGTCATCT TCATCTTAAA TTCTAATTAT
TAACTTATTA TCTCCTGTGC CATACATTAG TTTATTTTGT TCCCACGAGG TATATGAAGC CATAAGTTAC TGACCATCAT
ATTCTACTAC TTGAACCTTT GCACTTGATT TTCACTAGTG TGGTATCATT CTATCAAGCT TATTCTATAC TAAGTTCTAG
TTATAGTTTT TGAATCTAGC TTGCATTTTG AGTAGAGGCA CAGCATGAAC CAATTATATG GTTTTAGACT AAAACAATTA
GAGGGTTCAG GTTGCGGGTT TAATATGAAA TTTTAGCTTT TTCATATGTT GATTTATCGT TAAGTACATA TACTTATTTA
AATACAATTC CTATCAAAGC ATTGTAGAAG TTTTTCCCCG ACGGAAATTT TCTGCAGTAT TAGAAGTGTC ATTCCCCTAC
AAAATACAAT CACCACCAAT GTCTTTATCA CTGATTGCTT TTCTTCTGTG TTTAATGCAT GAGCATGCGA TCGCAATCTA
CAATTCTGTG TAGCATTTGA ACAGTATGAT ATGATTTTCT TCTCATATAT GACAGTACCG TAATTCAGTT TTATCTGATT
GCAGCATGTG AAACGAACAG CACTAAGGGA TTTCAATGCT AGCAGTGCTG AAGTTATATG TGAGGTGAGT GAAATTTACT
TCATATCTGA TGTTTTTTAA TCGTGCAATT AAAGTTAATT TGTTCCTGTA TAAACTCATG TTTTTTCTTG CATGAAAAAT
GTATAATCCT CTTCCTATTG ATTTCATCAT AAGGAACAAT AACTCCAGTG TTCTTATGCC AGTTATTTGT ATAGTAACCA
ATATACAATT TACCAGACTC TTACGGTTGA ACTTTTTTTT CCTCTTGCTT TGGCAGCTTC GGTTTGATGT ACCAAAAATG
TACAAATTTC ATAAGAAGAA GGAAGTAGAT ATTGCTGTGG ACCTCTGGCG GTTTGTTCCA GCAAGTCATC AAAGAAGTAC
TTCATGCAGA CAAGGATAGT GTGTATTGGA ATGTATGATA AGATTGCAAG AAAAAGGAAA ATTTTGGGTA CCTATAGAAA
GAAACCTTCT CTATGTGACA AGCACTTGCA CGTAAAATTG GTCGATGGCA CTTCTTTTAG TTGTGTGTAT CTATAAATTC
AATGGTCGAG AAGATACAGT GCTCTTTCTG CTTGTTCGTA CAGGGATCTT CCAGAAGTTG GTTATATCAT GAAACTTAGT
TATATCAGAC AATATTATGC TCCTTCTATT TCATATGGAT TATCAATTTA GCGTTGAACT TTTCTCGTAA GTACTATTGT
TTTGGAGTAT TTACTTTTAA TCTGAAAAAA AGAAAACTTA AGT

>Vigan.11G249700.01
TAGAAAATTT AGGCAGAAGA AAAAATGGCA GTGAAAGTTT GAATCGGAAA AGATGAAGCT GAAGCAGTTG GAAGGCCTTC
TTGGTGGTCT CCAGCAGTTC CCTCAACCCA AGGTGGAGCT TGAACAGTAT CCAACGGGAC CCCATATTGC TTCCCGAATG
CTTTTCACTG CAGAGAATTC TTTTGGGGAT GTGAGCAACA AAGTAGTGGC TGACTTTGGA TGCGGCTGTG GTACGTTAGG
TGTTGCAGCT GCCCTTTTGA GTGCAGAACA TGTTCTCAGC ATTGACATTG ATCCAGAATC TCTTGAAGTA GCTTCTGTTA
ATGCAGAGGA ACTTGAGCTT GATATCGATT TTATTCGGTC TAATGTCTTG GATTTGGGAT GGAGAGGTTC AATTGTTGAT
ACAGTTATAA TGAATCCTCC ATTTGGTACT CGTAAAAAAG GTGCAGATTT GGATTTTCTC TCTGTTGCTT TGAAGGTTGC
TTCTCAAGCT GTTTATTCCT TGCATAAGAC TTCAACAAGA GATCATGTGA AACGAACAGC ACTAAGGGAT TTCAATGCTA
GCAGTGCTGA AGTTATATGT GAGCTTCGGT TTGATGTACC AAAAATGTAC AAATTTCATA AGAAGAAGGA AGTAGATATT
GCTGTGGACC TCTGGCGGTT TGTTCCAGCA AGTCATCAAA GAAGTACTTC ATGCAGACAA GGATAGTGTG TATTGGAATG
TATGATAAGA TTGCAAGAAA AAGGAAAATT TTGGGTACCT ATAGAAAGAA ACCTTCTCTA TGTGACAAGC ACTTGCACGT
AAAATTGGTC GATGGCACTT CTTTTAGTTG TGTGTATCTA TAAATTCAAT GGTCGAGAAG ATACAGTGCT CTTTCTGCTT
GTTCGTACAG GGATCTTCCA GAAGTTGGTT ATATCATGAA ACTTAGTTAT ATCAGACAAT ATTATGCTCC TTCTATTTCA
TATGGATTAT CAATTTAGCG TTGAACTTTT CTCGTAAGTA CTATTGTTTT GGAGTATTTA CTTTTAATCT GAAAAAAAGA
AAACTTAAGT 

>Vigan.11G249700.01
ATGAAGCTGA AGCAGTTGGA AGGCCTTCTT GGTGGTCTCC AGCAGTTCCC TCAACCCAAG GTGGAGCTTG AACAGTATCC
AACGGGACCC CATATTGCTT CCCGAATGCT TTTCACTGCA GAGAATTCTT TTGGGGATGT GAGCAACAAA GTAGTGGCTG
ACTTTGGATG CGGCTGTGGT ACGTTAGGTG TTGCAGCTGC CCTTTTGAGT GCAGAACATG TTCTCAGCAT TGACATTGAT
CCAGAATCTC TTGAAGTAGC TTCTGTTAAT GCAGAGGAAC TTGAGCTTGA TATCGATTTT ATTCGGTCTA ATGTCTTGGA
TTTGGGATGG AGAGGTTCAA TTGTTGATAC AGTTATAATG AATCCTCCAT TTGGTACTCG TAAAAAAGGT GCAGATTTGG
ATTTTCTCTC TGTTGCTTTG AAGGTTGCTT CTCAAGCTGT TTATTCCTTG CATAAGACTT CAACAAGAGA TCATGTGAAA
CGAACAGCAC TAAGGGATTT CAATGCTAGC AGTGCTGAAG TTATATGTGA GCTTCGGTTT GATGTACCAA AAATGTACAA
ATTTCATAAG AAGAAGGAAG TAGATATTGC TGTGGACCTC TGGCGGTTTG TTCCAGCAAG TCATCAAAGA AGTACTTCAT
GCAGACAAGG ATAG

>Vigan.11G249700.01
MKLKQLEGLL GGLQQFPQPK VELEQYPTGP HIASRMLFTA ENSFGDVSNK VVADFGCGCG TLGVAAALLS AEHVLSIDID
PESLEVASVN AEELELDIDF IRSNVLDLGW RGSIVDTVIM NPPFGTRKKG ADLDFLSVAL KVASQAVYSL HKTSTRDHVK
RTALRDFNAS SAEVICELRF DVPKMYKFHK KKEVDIAVDL WRFVPASHQR STSCRQG*