GBrowse Details

Vigan.11G209900.01

Basic Information:
Name: Vigan.11G209900.01
Multiple alignment
Variant Information
Position: Chr11:33563249..33565996 (+ strand)
Length: 2748
Functional Information:
Description: Similar to Uncharacterized protein. [I1MN55, Glycine max]
InterPro: Nicotinamide N-methyltransferase-like (IPR019410)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:91.87,64.24,12.07,12.23,18.73,24.17,9.83,11.81
Arabidopsis thaliana homolog: AT1G73320.1
Automatic updates:
Name: BT090597 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-4L4 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:33563249..33563278 (+ strand)
Length: 30
Type: five_prime_UTR
Position: Chr11:33563279..33563518 (+ strand)
Length: 240
Type: CDS
Position: Chr11:33564124..33564266 (+ strand)
Length: 143
Type: CDS
Position: Chr11:33564761..33564945 (+ strand)
Length: 185
Type: CDS
Position: Chr11:33565507..33565620 (+ strand)
Length: 114
Type: CDS
Position: Chr11:33565700..33565827 (+ strand)
Length: 128
Type: CDS
Position: Chr11:33565828..33565996 (+ strand)
Length: 169
Type: three_prime_UTR

>Vigan.11G209900.01 class=Sequence position=Chr11:33563249..33565996 (+ strand)
TGAAACCGAA GCAGAGAGAG CGAGGACACC ATGGAAAAGG AAGAGGAAGA GGAAGCAGTG GCACCAATGG TGAAGTTGGG
ATCGTACGGT GGTGAAGTTC GGTTGATGGT TGGTGGAGAG GAATCCGCTG CGGAGGAGAC CATGCTTCTT TGGGGTATTC
AGCAACCCAC GCTTTCCAAA CCCAACGCTT TTGTCTCTCA ATCTTCTCTG CAACTCTCCC TCGACACTTG TGGCCACTCT
CTCTCTATTC TTCAATCCCC TTCTTCCTTG GTATCCTTCT CTCTTACCCT CCTCTCAGTT TTAGTTAAAA AGATTATTGG
TAAAAAAAAG CTTTGATTTT GATCCTGGTT TGTGTTCTAA CTTGATGACC CAGTTGCTTT GTTGAGCCCG AATGTGATTT
CCCTTTTCAT AAAATACTAT GGTACTGATT GTTATTTCTT AAAGGTGGAA GCTTATGACA ACCATGGTTG ATGATTTGTA
CTATTGAAGC TCAGATTTTT AGAAAAAGAA AACCACTTAA CTTCACATTT GGTAATCATC CATATTTTGA TCATGGTTTG
GGTTATAACT TGATGACCTG GTTGTTTTTT AGCCCGGACA TGATTGCCCT TTTCATAAAT GCTGCTGATT GTTGTTGGTT
AAAGTTAGAG TCTTGCAGTG CCATCCATTG ATTACGTTGT TATTGAAGCT TTTAATTTGG AGAAAATGAG CAAGTTAACT
TCACATTATT GCTCAAACAG CTTCTGCTTT AGCTTGTGCC GTTTCTAATT GTTGGTTTAT TGTTTTAAGA TTTAATGTTG
AAATTTCCAT CATGTGGTGA ATTAACTATT GTTAATTCAG CTCACATTTA TGGTATTTTC GAATGTTGAT TTTAGGGAAA
ACCTGGAGTG ACGGGAGCGG TGATGTGGGA CAGTGGAGTT GTATTGGGGA AGTTTCTGGA GCATTCTGTT GACTCAGGGA
TGCTTGTCCT TCAGGGAAAG AAGATTGTTG AGTTGGGATC TGGTTGTGGA TTGGTCGGGT AAGCTCAATT GAAATCTCTT
TCTTCTTCTT TATCTGTTCA TGACATATGG CTTTGGTTTG TCAGCAATTT CTTGATTAGT TTTTGGTTTC TTCCACATGA
TGAACTAGGA AAATAGAGGT TTGAGCTTTG GCATTGTTTT TCTTTACAAT GAAGCGACAA TTTGGATAAA CTTTTCAATT
GGCCATTACA GTAGAAGAAA TAAGATGAAA GATAAAATTG AATCAAATTT CTCCTACTAG TTTAAATATA CTTTTCTACC
TTAACTTTGT CATAAGCCTT ACCTTATTTG TTGTGGTGTA TAAGTTGATT TCATCTTATG GGAGGAGTTT GATTCATTTC
ACTCCTTACT TTGTCTTCTT TTCCTTTTCT GTAACTGTTT ATTTAGAAGT TTAACCCTAC TAGCCCTTGG TTGTCTAGCA
AACGGAGAAC AATTATTTTT TAGGTTGTTC TTCCTCAATC CATGATACAC CTTTCTTATT TTTCTTCCTT AGTTGTATTG
CAGCCCTCTT GGGTGGTGAA GTCGTTGTTA CTGATCTGCC AGATAGGCTG AGGCTACTGA GAAAGAACAT TGAGACCAAT
ATGAAACATG TTTCTCTACG CGGTTCTATA ACAGCAACTG AACTCACATG GGGAGAAGAT CCTGACTCAG AACTCATTGA
TCCCACACCT GATTTCGGTA AAAGTTCTCT CCCTCAACCC CTTCCCACTG CTTAGAGCTA ACAAGGAGAA ACAAACAAGA
TTCAACCACG GGCTCCGCAA AACTTATGAA ATGTGACAGT GATTTGCGTT CCTATAAATT GTGATTACAG TCATTGTTTT
AATAATAGAT TTGTAGTTAG TTGCATTTTT TTTCTTCTGT TGATCCGAAT GCCTATTGGA GTTACCTTTG TCTACTTTGC
TAGCATTTTC TTTTATTACT TTCTTTGATG TTTTTAATCT AATATTCGTT GTGAGATCAT TGCAAATACA ACCTGTTTTG
CAAAATTAGA ATTTAGATGA AGTGTTACAA CTTATGCCAC CATGGTCTCG TGAAAATTTT CGCATCAATT CATATCAGAA
GTGTACTTTT TTTACATTCT AGCATGCTGA GGCTCTTGTT AATACTATAT TTACTAAAAT TGTCATTTTG GTGCTCTTGG
CTAATGAGAA TTGAATGAGA GTTCCATAAA AAGCTGTTAA ATTTTCAACT ATTTATATGA ATAGATTGTT GATTCAATAC
TTGATTTCCT GTTATCAGTG CTAGGATCTG ATGTGGTGTA CAGTGAGGGG GCAGTTGTGG ATCTGCTAGA GACTCTTATG
CAGCTCTCTG GACCAAATAC AACAATATTT TTGGCTGGAG AACTCAGAAA TGGTAAAGAA TTCTATTCCT TTTTCTTCTT
TTCCGGGACC ACAATCCATG CCCTGTGCTG AATAGTGTTT TCTGATTTCA GATGTCATTC TTGAGTACTT CTTAGAAGCT
GCAATGAACA ATTTCACTAT TGGCCGTGTG GATCAAACAC TGTGGCACCC TGATTATTGC AGCAATCGTG TTGTTCTTTA
TGTTCTAGTG AAGAAATAAT TGTTGAGATT AATTTTTGAT TGTCTTGTGG AATGCTGATA GCATAATGTC CATAAAGTGC
ATTAAGAATG AGAATTGTGA GTTTTTTTAT CACTATATTT TCTTTGTTAA CCAATGAGTA TTTTGTTGTC TTTTATCTGG
AAAATGGAAT TTGTATTCTG TTTGGTTA

>Vigan.11G209900.01
TGAAACCGAA GCAGAGAGAG CGAGGACACC ATGGAAAAGG AAGAGGAAGA GGAAGCAGTG GCACCAATGG TGAAGTTGGG
ATCGTACGGT GGTGAAGTTC GGTTGATGGT TGGTGGAGAG GAATCCGCTG CGGAGGAGAC CATGCTTCTT TGGGGTATTC
AGCAACCCAC GCTTTCCAAA CCCAACGCTT TTGTCTCTCA ATCTTCTCTG CAACTCTCCC TCGACACTTG TGGCCACTCT
CTCTCTATTC TTCAATCCCC TTCTTCCTTG GGAAAACCTG GAGTGACGGG AGCGGTGATG TGGGACAGTG GAGTTGTATT
GGGGAAGTTT CTGGAGCATT CTGTTGACTC AGGGATGCTT GTCCTTCAGG GAAAGAAGAT TGTTGAGTTG GGATCTGGTT
GTGGATTGGT CGGTTGTATT GCAGCCCTCT TGGGTGGTGA AGTCGTTGTT ACTGATCTGC CAGATAGGCT GAGGCTACTG
AGAAAGAACA TTGAGACCAA TATGAAACAT GTTTCTCTAC GCGGTTCTAT AACAGCAACT GAACTCACAT GGGGAGAAGA
TCCTGACTCA GAACTCATTG ATCCCACACC TGATTTCGTG CTAGGATCTG ATGTGGTGTA CAGTGAGGGG GCAGTTGTGG
ATCTGCTAGA GACTCTTATG CAGCTCTCTG GACCAAATAC AACAATATTT TTGGCTGGAG AACTCAGAAA TGATGTCATT
CTTGAGTACT TCTTAGAAGC TGCAATGAAC AATTTCACTA TTGGCCGTGT GGATCAAACA CTGTGGCACC CTGATTATTG
CAGCAATCGT GTTGTTCTTT ATGTTCTAGT GAAGAAATAA TTGTTGAGAT TAATTTTTGA TTGTCTTGTG GAATGCTGAT
AGCATAATGT CCATAAAGTG CATTAAGAAT GAGAATTGTG AGTTTTTTTA TCACTATATT TTCTTTGTTA ACCAATGAGT
ATTTTGTTGT CTTTTATCTG GAAAATGGAA TTTGTATTCT GTTTGGTTA

>Vigan.11G209900.01
ATGGAAAAGG AAGAGGAAGA GGAAGCAGTG GCACCAATGG TGAAGTTGGG ATCGTACGGT GGTGAAGTTC GGTTGATGGT
TGGTGGAGAG GAATCCGCTG CGGAGGAGAC CATGCTTCTT TGGGGTATTC AGCAACCCAC GCTTTCCAAA CCCAACGCTT
TTGTCTCTCA ATCTTCTCTG CAACTCTCCC TCGACACTTG TGGCCACTCT CTCTCTATTC TTCAATCCCC TTCTTCCTTG
GGAAAACCTG GAGTGACGGG AGCGGTGATG TGGGACAGTG GAGTTGTATT GGGGAAGTTT CTGGAGCATT CTGTTGACTC
AGGGATGCTT GTCCTTCAGG GAAAGAAGAT TGTTGAGTTG GGATCTGGTT GTGGATTGGT CGGTTGTATT GCAGCCCTCT
TGGGTGGTGA AGTCGTTGTT ACTGATCTGC CAGATAGGCT GAGGCTACTG AGAAAGAACA TTGAGACCAA TATGAAACAT
GTTTCTCTAC GCGGTTCTAT AACAGCAACT GAACTCACAT GGGGAGAAGA TCCTGACTCA GAACTCATTG ATCCCACACC
TGATTTCGTG CTAGGATCTG ATGTGGTGTA CAGTGAGGGG GCAGTTGTGG ATCTGCTAGA GACTCTTATG CAGCTCTCTG
GACCAAATAC AACAATATTT TTGGCTGGAG AACTCAGAAA TGATGTCATT CTTGAGTACT TCTTAGAAGC TGCAATGAAC
AATTTCACTA TTGGCCGTGT GGATCAAACA CTGTGGCACC CTGATTATTG CAGCAATCGT GTTGTTCTTT ATGTTCTAGT
GAAGAAATAA 

>Vigan.11G209900.01
MEKEEEEEAV APMVKLGSYG GEVRLMVGGE ESAAEETMLL WGIQQPTLSK PNAFVSQSSL QLSLDTCGHS LSILQSPSSL
GKPGVTGAVM WDSGVVLGKF LEHSVDSGML VLQGKKIVEL GSGCGLVGCI AALLGGEVVV TDLPDRLRLL RKNIETNMKH
VSLRGSITAT ELTWGEDPDS ELIDPTPDFV LGSDVVYSEG AVVDLLETLM QLSGPNTTIF LAGELRNDVI LEYFLEAAMN
NFTIGRVDQT LWHPDYCSNR VVLYVLVKK*