GBrowse Details

Vigan.11G040700.01

Basic Information:
Name: Vigan.11G040700.01
Multiple alignment
Variant Information
Position: Chr11:4506755..4510005 (+ strand)
Length: 3251
Functional Information:
Description: Similar to Aldose 1-epimerase. [V7C1Q5, Phaseolus vulgaris]
GO: Biological Process: carbohydrate metabolic process (GO:0005975)
Biological Process: hexose metabolic process (GO:0019318)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: isomerase activity (GO:0016853)
Molecular Function: carbohydrate binding (GO:0030246)
InterPro: Aldose 1-/Glucose-6-phosphate 1-epimerase (IPR008183)
Galactose mutarotase-like domain (IPR011013)
Glycoside hydrolase-type carbohydrate-binding, subgroup (IPR014718)
Aldose 1-epimerase (IPR015443)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.34,0.13,17.55,8.14,19.46,8.84,47.79,7.76
Automatic updates:
Name: NM_001255025 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max aldose 1-epimerase-like (LOC100803092), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:4506755..4506908 (+ strand)
Length: 154
Type: five_prime_UTR
Position: Chr11:4506909..4507089 (+ strand)
Length: 181
Type: CDS
Position: Chr11:4507192..4507241 (+ strand)
Length: 50
Type: CDS
Position: Chr11:4508220..4508343 (+ strand)
Length: 124
Type: CDS
Position: Chr11:4508489..4508596 (+ strand)
Length: 108
Type: CDS
Position: Chr11:4509046..4509692 (+ strand)
Length: 647
Type: CDS
Position: Chr11:4509693..4510005 (+ strand)
Length: 313
Type: three_prime_UTR

>Vigan.11G040700.01 class=Sequence position=Chr11:4506755..4510005 (+ strand)
ATCTCCTTTC AATCTTCTTT TAAGTATCAC AAACCATTAA CTTTTTAGCA TTCACTTTTG CAGTTTCTCT GTTTTCTCTT
CACCTCTTGC TAGCTCTATA ATTCCATAAA ACAGCATTCT GAGAGTTTCC TTAAATGCTT GGTACCATAA TACAATGACC
AAGATCTTTG TGTTGTCGTG TGTTCTGTTC TTAGCTGCTT CTGGTTTTGT CCATGGCTCT CATGAGAAGA AGAAGGATCA
TATTAGGTTG TTTGAGCTGA AGAAAGGTGA TCTTTCTATA AAGGTCACCA ACTGGGGTGC AACACTTGTG TCTGTCATAC
TTCCTGATAA AAATGGTACA TATACTTCCA TTTTCTTAGA GTTCAAACCT TTTCATCAAT TGCTTATCTT CTTTTATACA
TTTCAAGACA TTCATTATGT TTTCTTTCCC CATGAAGGAG TGCTGGGTGA TATTGTTCTT GGATATGATT CTCCCATGGC
ATACACCGTA AGTCATAGAA AACATATTTT TTTAATACAC ATCAATTTTT TGCATTCATT TAATACTATC ATTTCTTATT
TTTTACTCTC TCTTTTTCTT AGAACTATTT TATTCTTATA CGGCATGATA TGACTGTAAA AGTGTGTCAT AGTCTAAGTC
ATAACACATT AGTAATTTCT TTTAGTTGGG TATAAAGATA AAATAGATTA ATTAGACTTA CCTTTGATTT TAAGAGTTTA
TTTTCTTTCT CTAATGCTCT TTAACAGGAA TGTAGATTAA AAATACATTT TTTTCAAGTT TATTAATACA AAAGAATAAG
ATGATAAATG AATTTTAACA TTTATATAAA TAAAATTAAT TTATAAAAAC TTTTTTATAT AGTTGATTTT AATGTTTTCA
TTTTTAATTT TTACATAAAT TAATTTTAAT TCAGGTAAAG AAGTCAATTA ACTTTTTATA TATTTTGTCT TCTAATAGTT
TCTGGGATGT TTAATGGCAT GTAAAAAGAA TTTGCTCTGT TCTGTACACA CTTAAGTGAC AACATTAGAA TTTGAATTTT
CTGCATAAAA AGTTCACTTC AAATTAATTT AACATATCAT AAATGTGATG ACAGAAGATA AATATAAAAG GAGGACAAAA
AGTCAGCAAT TAATGACTTT GTGATATATA AAATTTAAGT TTATTTGTAA AAGTGATAAA TGTAGTTTTA TGCGTCTGAA
ATAGATCCAT ATCATGTTGG TATATTTTAT TGAATAAAAA GTTTCTTTTT TTTTTTAATG TGAAGCATGC AACACGAAAT
GAATATTCTA TACATATAAA CTAATTTAAA ATTTCAATGA AAATGACTTT TCAAAGTTTG TATCTCTTTC ATTTTCTTTA
TAAAAAACAA TGAACTTCTC TTATTTTATA AAGTAACTAA GTGTAAAAAT GAAAGAGGTA AAAAAAAACA TTATCTGTGA
TTAAAATTGC AAAAACATTT TGCAGAATGA TTCATCATAT TTTGGAGCTA CAGTTGGCAG GATTGGTAAC AGAATTGGAG
GAGCTCAGTT CACTCTGAAT GGAATCCATT ACAAATTAGT TGCTAATGAA GGAAACAACA CACTTCATTG TATGTTTTAC
CATAGATACA ATTCAACACA ACTTTTCCAT AGTTTATGGT CTATGCTGCT GCAATATCAT TCAACACAAT TTGAAGTGCT
AATTTTCTCA TACAGAAAGA CTGACTCATT CTCTCTCACC GATCTTACTT ATAGCTGGAC CCAAAGCATT CAGTGATGTT
CTTTGGGATG TGAAAAAGTA TATAAAAGAT GGAGACAAAC CAAGAATCAC CTTCAGCTAC CTCAGTTTTG ATGGTGAAGG
AGGTAACTGC TATTAACTTT GTTTCTTTCA AACATAGAAA AAACTAATTT AAGTAAAGTT AAATTAATTT AAAATTTACT
TTTTAACATA ATATTAGAAT TTTGAACTAA AATCATCAGC TGAATCTTTT GAATAGACGT CTCGAACGTG AGAGTAGAAT
TAATGGATGA TATGATAGGT GGAATAAAAT ACTCACATAG ATCTTAAGAT AGACTCCAAC GATAACTCTG ATATCATATT
AGAAGGTGGT TTTAAACCTA ACTTAATCCC ACAAAACCAG CTTGTAAGAT GAGATTTACG TCCAATTATA TGTTATAATT
TAACCTTATT TTGTCTCTGA TTGACTTGGA ACTTCGTACA TTTCCTACGT GAAATGAAAA ATGAAGAATC AAAAAGTGTA
ATTTAGTCTG TTGGAGAAGT GAATCTGCAT AATTCAGTAT TTGTGTTGCA GGATTTCCTG GGGACCTGCT AGTAACTGTG
AGCTACATTC TTGGGAAAAA CTCACTGAGT ATAATCATGA AAGCAAAAGC ACTGAACAAG GCTACACCTG TGAATCTGTT
GAACCATGCA TACTGGAACC TAGGGAACCA CAACAGTGGC AATATTCTTA ATGAAGTGGT TCAGATATTT GGATCTCAAG
TGACCCTTTT CGATGATAAT CTCATTCCCA CAGGAAAATT TGCCTCTGTG AAGGGCACCC CATATGACTT CCTTGAACCA
CACACTGTTG GGGAAAGGAT CAACCAATTG GCAAAGACCA ATGGCTATAA CACGAACTAT GTGCTTGATG GTGCAAAAGG
CAAAAAGACA AAGCTTGGTG CCATAGTGGT TGATAAGAAG TCAGGGAGAG TGATGAAACT CTTCACAAAT GCTCCTGGTT
TGCAGTTCTA CACTGCTAAT TTTGTCAAGA ATGAAAAGGG AAAAGGGGGT TTTGTTTATC AGCCACGTTC AGCACTGTGT
TTGGAGAGCC AAGCATTCCC TGATTCTGTC AATCACCCTA ATTTTCCATC AACCATTGTC ACTCCTCAAA AGCCTTACAA
ACATGTCTTG TTGCTCAAAT TTTCCACCAA AATTCCACAT GCCTTTTCAC ATTTCTAAAT GGAATTCTGT GCTCTCTGCC
ACTTTTTTAT GTGCTTGTTG GTATCAGTGT AGCATGATTC CTGTTCTATT AAACTGAATA ATGAAATGTT TCAATTTTCT
GCATCTATTG TATTTACCCT TTTCAGTAAT CATATATCCT ATAGAATGCA TTTATTTCTG AAAGAGCACA GATAGAAACA
AAATGTCTAT GTGAATGCCT TGTTGGTTGT CAGAAATTGA TAAAATTCAA GCCCCTATGG CCTATGTGAT GTAGTACCAA
AAATGCTATC AGACTCAGTA AACTATATAT ACTGCTGGTA GTTCCCATCA G

>Vigan.11G040700.01
ATCTCCTTTC AATCTTCTTT TAAGTATCAC AAACCATTAA CTTTTTAGCA TTCACTTTTG CAGTTTCTCT GTTTTCTCTT
CACCTCTTGC TAGCTCTATA ATTCCATAAA ACAGCATTCT GAGAGTTTCC TTAAATGCTT GGTACCATAA TACAATGACC
AAGATCTTTG TGTTGTCGTG TGTTCTGTTC TTAGCTGCTT CTGGTTTTGT CCATGGCTCT CATGAGAAGA AGAAGGATCA
TATTAGGTTG TTTGAGCTGA AGAAAGGTGA TCTTTCTATA AAGGTCACCA ACTGGGGTGC AACACTTGTG TCTGTCATAC
TTCCTGATAA AAATGGAGTG CTGGGTGATA TTGTTCTTGG ATATGATTCT CCCATGGCAT ACACCAATGA TTCATCATAT
TTTGGAGCTA CAGTTGGCAG GATTGGTAAC AGAATTGGAG GAGCTCAGTT CACTCTGAAT GGAATCCATT ACAAATTAGT
TGCTAATGAA GGAAACAACA CACTTCATTC TGGACCCAAA GCATTCAGTG ATGTTCTTTG GGATGTGAAA AAGTATATAA
AAGATGGAGA CAAACCAAGA ATCACCTTCA GCTACCTCAG TTTTGATGGT GAAGGAGGAT TTCCTGGGGA CCTGCTAGTA
ACTGTGAGCT ACATTCTTGG GAAAAACTCA CTGAGTATAA TCATGAAAGC AAAAGCACTG AACAAGGCTA CACCTGTGAA
TCTGTTGAAC CATGCATACT GGAACCTAGG GAACCACAAC AGTGGCAATA TTCTTAATGA AGTGGTTCAG ATATTTGGAT
CTCAAGTGAC CCTTTTCGAT GATAATCTCA TTCCCACAGG AAAATTTGCC TCTGTGAAGG GCACCCCATA TGACTTCCTT
GAACCACACA CTGTTGGGGA AAGGATCAAC CAATTGGCAA AGACCAATGG CTATAACACG AACTATGTGC TTGATGGTGC
AAAAGGCAAA AAGACAAAGC TTGGTGCCAT AGTGGTTGAT AAGAAGTCAG GGAGAGTGAT GAAACTCTTC ACAAATGCTC
CTGGTTTGCA GTTCTACACT GCTAATTTTG TCAAGAATGA AAAGGGAAAA GGGGGTTTTG TTTATCAGCC ACGTTCAGCA
CTGTGTTTGG AGAGCCAAGC ATTCCCTGAT TCTGTCAATC ACCCTAATTT TCCATCAACC ATTGTCACTC CTCAAAAGCC
TTACAAACAT GTCTTGTTGC TCAAATTTTC CACCAAAATT CCACATGCCT TTTCACATTT CTAAATGGAA TTCTGTGCTC
TCTGCCACTT TTTTATGTGC TTGTTGGTAT CAGTGTAGCA TGATTCCTGT TCTATTAAAC TGAATAATGA AATGTTTCAA
TTTTCTGCAT CTATTGTATT TACCCTTTTC AGTAATCATA TATCCTATAG AATGCATTTA TTTCTGAAAG AGCACAGATA
GAAACAAAAT GTCTATGTGA ATGCCTTGTT GGTTGTCAGA AATTGATAAA ATTCAAGCCC CTATGGCCTA TGTGATGTAG
TACCAAAAAT GCTATCAGAC TCAGTAAACT ATATATACTG CTGGTAGTTC CCATCAG

>Vigan.11G040700.01
ATGACCAAGA TCTTTGTGTT GTCGTGTGTT CTGTTCTTAG CTGCTTCTGG TTTTGTCCAT GGCTCTCATG AGAAGAAGAA
GGATCATATT AGGTTGTTTG AGCTGAAGAA AGGTGATCTT TCTATAAAGG TCACCAACTG GGGTGCAACA CTTGTGTCTG
TCATACTTCC TGATAAAAAT GGAGTGCTGG GTGATATTGT TCTTGGATAT GATTCTCCCA TGGCATACAC CAATGATTCA
TCATATTTTG GAGCTACAGT TGGCAGGATT GGTAACAGAA TTGGAGGAGC TCAGTTCACT CTGAATGGAA TCCATTACAA
ATTAGTTGCT AATGAAGGAA ACAACACACT TCATTCTGGA CCCAAAGCAT TCAGTGATGT TCTTTGGGAT GTGAAAAAGT
ATATAAAAGA TGGAGACAAA CCAAGAATCA CCTTCAGCTA CCTCAGTTTT GATGGTGAAG GAGGATTTCC TGGGGACCTG
CTAGTAACTG TGAGCTACAT TCTTGGGAAA AACTCACTGA GTATAATCAT GAAAGCAAAA GCACTGAACA AGGCTACACC
TGTGAATCTG TTGAACCATG CATACTGGAA CCTAGGGAAC CACAACAGTG GCAATATTCT TAATGAAGTG GTTCAGATAT
TTGGATCTCA AGTGACCCTT TTCGATGATA ATCTCATTCC CACAGGAAAA TTTGCCTCTG TGAAGGGCAC CCCATATGAC
TTCCTTGAAC CACACACTGT TGGGGAAAGG ATCAACCAAT TGGCAAAGAC CAATGGCTAT AACACGAACT ATGTGCTTGA
TGGTGCAAAA GGCAAAAAGA CAAAGCTTGG TGCCATAGTG GTTGATAAGA AGTCAGGGAG AGTGATGAAA CTCTTCACAA
ATGCTCCTGG TTTGCAGTTC TACACTGCTA ATTTTGTCAA GAATGAAAAG GGAAAAGGGG GTTTTGTTTA TCAGCCACGT
TCAGCACTGT GTTTGGAGAG CCAAGCATTC CCTGATTCTG TCAATCACCC TAATTTTCCA TCAACCATTG TCACTCCTCA
AAAGCCTTAC AAACATGTCT TGTTGCTCAA ATTTTCCACC AAAATTCCAC ATGCCTTTTC ACATTTCTAA 

>Vigan.11G040700.01
MTKIFVLSCV LFLAASGFVH GSHEKKKDHI RLFELKKGDL SIKVTNWGAT LVSVILPDKN GVLGDIVLGY DSPMAYTNDS
SYFGATVGRI GNRIGGAQFT LNGIHYKLVA NEGNNTLHSG PKAFSDVLWD VKKYIKDGDK PRITFSYLSF DGEGGFPGDL
LVTVSYILGK NSLSIIMKAK ALNKATPVNL LNHAYWNLGN HNSGNILNEV VQIFGSQVTL FDDNLIPTGK FASVKGTPYD
FLEPHTVGER INQLAKTNGY NTNYVLDGAK GKKTKLGAIV VDKKSGRVMK LFTNAPGLQF YTANFVKNEK GKGGFVYQPR
SALCLESQAF PDSVNHPNFP STIVTPQKPY KHVLLLKFST KIPHAFSHF*