GBrowse Details

Vigan.10G210300.01

Basic Information:
Name: Vigan.10G210300.01
Multiple alignment
Variant Information
Position: Chr10:26054718..26056398 (- strand)
Length: 1681
Functional Information:
Description: Similar to Uncharacterized protein. [Q2TUW0, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
InterPro: Oxoglutarate/iron-dependent dioxygenase (IPR005123)
Non-haem dioxygenase N-terminal domain (IPR026992)
Isopenicillin N synthase-like (IPR027443)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.45,101.02,26.32,0.91,0.20,89.43,4.77,0.55
Arabidopsis thaliana homolog: AT4G22880.1
Automatic updates:
Name: AF325853 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max anthocyanidin synthase mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:26054718..26054877 (- strand)
Length: 160
Type: three_prime_UTR
Position: Chr10:26054878..26055439 (- strand)
Length: 562
Type: CDS
Position: Chr10:26055528..26056024 (- strand)
Length: 497
Type: CDS
Position: Chr10:26056025..26056398 (- strand)
Length: 374
Type: five_prime_UTR

>Vigan.10G210300.01 class=Sequence position=Chr10:26054718..26056398 (- strand)
CTAATTGTGG TTGATAGATA TGAAATAGAA AAGAGTAGTA CTATTTATTA TTTGATTTTT TAATTTGTTT TTGTTTTTAG
AAATATAAAA AAGAATTTAT TCATTGAGTA AAATACTTGA AAGAGAAGTT CGAGAATGGC AATGGAGGGT TAGGCGGAGT
GGTGTGGATG CAGATGATGC AGGAGCTTAA CCTCCAGTCA AGGCGCGTTG AAGTTTTGGT TTGTTGAGGA GCTGCCACGT
GACAACCAAC GCAAATGGAT GGAGACTGTT AGGGAAATTG ACAGTGGTGT TTGCTTAGAA TTGGAATATA AAACCCAGGG
AGAGGAAGAA CTGAACATCC AAGAGGTGAA GTGAAAGAAG GTTGGAGAGA GAAGATGGGT ACGGTGGGTC CGAGAGTTGA
AAGCTTGGCG AGCAGTGGGA TAACGTGTAT CCCGAAGGAG TACGTGAGGC CGCAAGAGGA GTTGGACAAC ATAGGAAACG
TGTTCGAGGA GGAGAAGAAG GAAGGGCCTC AAGTTCCAAC GATTGACCTG GGAGAGATAG ACTCGCCGTC GGAGGTTGTT
CGAGGGAAGT GTCGGGAGAA GCTGAAGAAA GCGGCGGCGG AATGGGGCGT GATGAACCTG GTGAACCATG GCATCCCCGA
GGAGCTCTTG AATCGCCTGC GGAAAGCAGG GGAAACCTTC TTCTCTCTTC CCATTGAGGA GAAGGAGAAG TACGCCAACG
ACCAAGCCTC TGGGAAGATT CAGGGGTACG GAAGCAAGCT TGCCAACAAT GCCAGTGGGC AATTGGAGTG GGAAGATTAC
TTCTTCCACC TTGTTTATCC TGAAGACAAA CGCGACCTCT CCATCTGGCC AACCAAACCT TCTGATTACA CGTGAGCATT
CATCATCATC GTTTCTTCGT TCCTTCCACT TGATTATAGT TTCTTACATA TATATTGCTA TGTTTTGTTT TTGATAAAGT
GAGGCAACTA GCGAGTATGC AAGGCAACTG AGGAGTCTTG CGACGAAGAT ACTGGAGGCA CTTTCTATTG GATTGGGGTT
GGAAGGTGGA AGATTAGAGA AGGAAGTGGG TGGAATGGAA GAGCTTTTGC TTCAGTTGAA GATCAACTAC TACCCAATTT
GTCCACAGCC GGAATTGGCT CTGGGAGTTG AAGCTCACAC CGATATAAGT TCACTGACCT TCCTCCTTCA TAACATGGTG
CCGGGTCTGC AACTTTTCTA CAAGGGAAAA TGGGTGACGG CGAAGTGTGT GCCAAATTCG ATTTTCATGC ACATCGGAGA
CACCGTTGAG ATCCTGAGTA ACGGGAGGTA CAAGAGTATT CTCCACAGGG GATTGGTGAA CAAAGAAAAG GTTCGAATAT
CGTGGGCGGT GTTCTGTGAA CCACCGAAGG AGAAGATCAT CTTGCAGCCA CTGCCTGAAC TTGTGACGGA GAAAGAACCG
GCACGTTTTC CTCCCCGCAC TTTTGCTCAA CATATTCACC ACAAACTTTT CAGGAAGGAC GAGGAAGCTC TCCCGAATTG
AGTCTCTGTC TCGTCATTCA TCATCACTCT ACTCTATGCT TCTCTTCTGC ACTTCTTAGT CTTTTTGCTT GTACTAATAA
AATGACCACT CGTCTGGTCT CTCTCTTCAT GTTAAGTTTC TTTCATCTCC TTTATTAAAT ATATTATTTT TCTTTATTGA
A

>Vigan.10G210300.01
CTAATTGTGG TTGATAGATA TGAAATAGAA AAGAGTAGTA CTATTTATTA TTTGATTTTT TAATTTGTTT TTGTTTTTAG
AAATATAAAA AAGAATTTAT TCATTGAGTA AAATACTTGA AAGAGAAGTT CGAGAATGGC AATGGAGGGT TAGGCGGAGT
GGTGTGGATG CAGATGATGC AGGAGCTTAA CCTCCAGTCA AGGCGCGTTG AAGTTTTGGT TTGTTGAGGA GCTGCCACGT
GACAACCAAC GCAAATGGAT GGAGACTGTT AGGGAAATTG ACAGTGGTGT TTGCTTAGAA TTGGAATATA AAACCCAGGG
AGAGGAAGAA CTGAACATCC AAGAGGTGAA GTGAAAGAAG GTTGGAGAGA GAAGATGGGT ACGGTGGGTC CGAGAGTTGA
AAGCTTGGCG AGCAGTGGGA TAACGTGTAT CCCGAAGGAG TACGTGAGGC CGCAAGAGGA GTTGGACAAC ATAGGAAACG
TGTTCGAGGA GGAGAAGAAG GAAGGGCCTC AAGTTCCAAC GATTGACCTG GGAGAGATAG ACTCGCCGTC GGAGGTTGTT
CGAGGGAAGT GTCGGGAGAA GCTGAAGAAA GCGGCGGCGG AATGGGGCGT GATGAACCTG GTGAACCATG GCATCCCCGA
GGAGCTCTTG AATCGCCTGC GGAAAGCAGG GGAAACCTTC TTCTCTCTTC CCATTGAGGA GAAGGAGAAG TACGCCAACG
ACCAAGCCTC TGGGAAGATT CAGGGGTACG GAAGCAAGCT TGCCAACAAT GCCAGTGGGC AATTGGAGTG GGAAGATTAC
TTCTTCCACC TTGTTTATCC TGAAGACAAA CGCGACCTCT CCATCTGGCC AACCAAACCT TCTGATTACA CTGAGGCAAC
TAGCGAGTAT GCAAGGCAAC TGAGGAGTCT TGCGACGAAG ATACTGGAGG CACTTTCTAT TGGATTGGGG TTGGAAGGTG
GAAGATTAGA GAAGGAAGTG GGTGGAATGG AAGAGCTTTT GCTTCAGTTG AAGATCAACT ACTACCCAAT TTGTCCACAG
CCGGAATTGG CTCTGGGAGT TGAAGCTCAC ACCGATATAA GTTCACTGAC CTTCCTCCTT CATAACATGG TGCCGGGTCT
GCAACTTTTC TACAAGGGAA AATGGGTGAC GGCGAAGTGT GTGCCAAATT CGATTTTCAT GCACATCGGA GACACCGTTG
AGATCCTGAG TAACGGGAGG TACAAGAGTA TTCTCCACAG GGGATTGGTG AACAAAGAAA AGGTTCGAAT ATCGTGGGCG
GTGTTCTGTG AACCACCGAA GGAGAAGATC ATCTTGCAGC CACTGCCTGA ACTTGTGACG GAGAAAGAAC CGGCACGTTT
TCCTCCCCGC ACTTTTGCTC AACATATTCA CCACAAACTT TTCAGGAAGG ACGAGGAAGC TCTCCCGAAT TGAGTCTCTG
TCTCGTCATT CATCATCACT CTACTCTATG CTTCTCTTCT GCACTTCTTA GTCTTTTTGC TTGTACTAAT AAAATGACCA
CTCGTCTGGT CTCTCTCTTC ATGTTAAGTT TCTTTCATCT CCTTTATTAA ATATATTATT TTTCTTTATT GAA

>Vigan.10G210300.01
ATGGGTACGG TGGGTCCGAG AGTTGAAAGC TTGGCGAGCA GTGGGATAAC GTGTATCCCG AAGGAGTACG TGAGGCCGCA
AGAGGAGTTG GACAACATAG GAAACGTGTT CGAGGAGGAG AAGAAGGAAG GGCCTCAAGT TCCAACGATT GACCTGGGAG
AGATAGACTC GCCGTCGGAG GTTGTTCGAG GGAAGTGTCG GGAGAAGCTG AAGAAAGCGG CGGCGGAATG GGGCGTGATG
AACCTGGTGA ACCATGGCAT CCCCGAGGAG CTCTTGAATC GCCTGCGGAA AGCAGGGGAA ACCTTCTTCT CTCTTCCCAT
TGAGGAGAAG GAGAAGTACG CCAACGACCA AGCCTCTGGG AAGATTCAGG GGTACGGAAG CAAGCTTGCC AACAATGCCA
GTGGGCAATT GGAGTGGGAA GATTACTTCT TCCACCTTGT TTATCCTGAA GACAAACGCG ACCTCTCCAT CTGGCCAACC
AAACCTTCTG ATTACACTGA GGCAACTAGC GAGTATGCAA GGCAACTGAG GAGTCTTGCG ACGAAGATAC TGGAGGCACT
TTCTATTGGA TTGGGGTTGG AAGGTGGAAG ATTAGAGAAG GAAGTGGGTG GAATGGAAGA GCTTTTGCTT CAGTTGAAGA
TCAACTACTA CCCAATTTGT CCACAGCCGG AATTGGCTCT GGGAGTTGAA GCTCACACCG ATATAAGTTC ACTGACCTTC
CTCCTTCATA ACATGGTGCC GGGTCTGCAA CTTTTCTACA AGGGAAAATG GGTGACGGCG AAGTGTGTGC CAAATTCGAT
TTTCATGCAC ATCGGAGACA CCGTTGAGAT CCTGAGTAAC GGGAGGTACA AGAGTATTCT CCACAGGGGA TTGGTGAACA
AAGAAAAGGT TCGAATATCG TGGGCGGTGT TCTGTGAACC ACCGAAGGAG AAGATCATCT TGCAGCCACT GCCTGAACTT
GTGACGGAGA AAGAACCGGC ACGTTTTCCT CCCCGCACTT TTGCTCAACA TATTCACCAC AAACTTTTCA GGAAGGACGA
GGAAGCTCTC CCGAATTGA

>Vigan.10G210300.01
MGTVGPRVES LASSGITCIP KEYVRPQEEL DNIGNVFEEE KKEGPQVPTI DLGEIDSPSE VVRGKCREKL KKAAAEWGVM
NLVNHGIPEE LLNRLRKAGE TFFSLPIEEK EKYANDQASG KIQGYGSKLA NNASGQLEWE DYFFHLVYPE DKRDLSIWPT
KPSDYTEATS EYARQLRSLA TKILEALSIG LGLEGGRLEK EVGGMEELLL QLKINYYPIC PQPELALGVE AHTDISSLTF
LLHNMVPGLQ LFYKGKWVTA KCVPNSIFMH IGDTVEILSN GRYKSILHRG LVNKEKVRIS WAVFCEPPKE KIILQPLPEL
VTEKEPARFP PRTFAQHIHH KLFRKDEEAL PN*