GBrowse Details

Vigan.10G197500.01

Basic Information:
Name: Vigan.10G197500.01
Multiple alignment
Variant Information
Position: Chr10:25086737..25089292 (- strand)
Length: 2556
Functional Information:
Description: Similar to Uncharacterized protein. [I1LGW3, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine-threonine/tyrosine-protein kinase catalytic domain (IPR001245)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Concanavalin A-like lectin/glucanase, subgroup (IPR013320)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:3.31,1.65,1.59,6.24,3.68,1.61,4.69,4.39
Automatic updates:
Name: NM_001251548 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max NAK-type protein kinase (LOC100305390), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:25086737..25087054 (- strand)
Length: 318
Type: three_prime_UTR
Position: Chr10:25087055..25087480 (- strand)
Length: 426
Type: CDS
Position: Chr10:25087703..25087825 (- strand)
Length: 123
Type: CDS
Position: Chr10:25087939..25088199 (- strand)
Length: 261
Type: CDS
Position: Chr10:25088685..25089014 (- strand)
Length: 330
Type: CDS
Position: Chr10:25089015..25089292 (- strand)
Length: 278
Type: five_prime_UTR

>Vigan.10G197500.01 class=Sequence position=Chr10:25086737..25089292 (- strand)
TCAAATCAAA CATAACCTTT TAACTGTTAA TGTTATGTTT CTGTGTATCA GACGCGGATT TTCACGCGGT TTTCCTCTCA
ATTCCCTTCT TCTTATTGTT CAATTTCCTC TGCTACACGG AACAAACCCG TTTCAATTTT TTCTCTTTCT CCATTTCATT
CGTTTTCGCA TTTTTCAAAC ATAATTTGCT TCATCTGTTT TCATTTTCTC TTGAACGAAC CCTCTGTCTT TCTATACTCT
GTTCTGCTGA GAATTTTAGT AACTTGGATG ATTAGAAAAT GAACTGTTTG TTCTTCAAAA AGAAATCAAA ATCCCACCCA
GAACTCCCAA AGGGACGGAA GAAGAAAAGC CAGGTTGTGA ATGGAGCACC GAAGTCCCCA AGCTCGGTAC CATCGCCGAG
GAGCATAAAA GAATTGTACA GAGAGAAGGA ACAGAGTTAC AGAATTTTCA GTTTAAAAGA GCTTATAGAT GCAACAAATG
GTTTCAATAG CATGCTGAAG ATTGGAGAAG GTGGTTTTGG AAAAGTATAT AGAGGAACCA TCAGTCCTAA AGATGGAGCT
TCTCCAATTG TAGTCGCAAT AAAAAAACTT AACGCGCATG GCTTACAGGT ATATATATAC CCAAACACAC CCTTCTTCAG
TACCTTTGTT TTTCAATTCT CAATCTAAAA AATATGTGGT TTTTATGACT GTTATCTGCT CCGGTGATTC TATGTCCCTT
CTTTTTGTTT ATATTAGAAT TGTTGAAAGA TAATGGACTA TTGCAAGCGT GATACAATGT ATACAAGATA CAACGATTTT
AATCGGTGTA GGTGGTTCTT TTACGAAAAT CATTTATGTG AAAGGCAAAT TCAGATTCTG AAAAACCTAA ATGAGAAAAC
TTCTATTAAT CATGGATGAG TTGATTTTGA TGTGAGGAAA AACTTCTTTT CATGGCTGTT AGGAACTGCT TTCAATGGAA
AACGAGTTTG CAGAGTGTCA GTCAAATGTG TTATGCTGTC TCTGAATTGT GTCAACACTT GAGTACTACT TTAAAGATAT
ACTTGGTTTG GTTTCTCATG TTTGTGTTAT TTTTTATATT GTATTCTGTA AAGGGACACA AAGAATGGCT TGCAGAAGTT
CAATTTCTGA GCGTTGCTAA CCACCCTAAT TTGGTTAAGC TTCTGGGATA CTGCTCAATA GACAGTAAAA GAGGAATCCA
ACGGTTGTTG GTATATGAGT TCATGTCTAA CAGGAGTCTG GAAGATCATC TTTTCAGTGT TTCTTTACCT CCTTTGCCTT
GGCCAACAAG ATTGCAGATC ATGCTCGGTG CTGCTCAAGG ATTGTATTAT CTCCACAACG GATTGGAGAT TCAGGTACAT
TGTAGTTGAG ACATGTTTCA CATTTGTAAT CTTGTCTGAA TTGAACATCG TAGGTGTTCT AATTGATTAT AATAATCTTG
TCTTGTTTTA ATGTTTTGTA TTGGAAGGTG ATCTACCGCG ATTTCAAATC TTCAAACGTG TTGCTGGACA AGCAATTTCA
TCCCAAACTT TCAGATTTTG GTCTTGCAAG AGAGGGTCCA ACAGGTGACA AGACTCATGT ATCTACTGCG GTAAGTTGAA
CTCCTATAGT TTTTCATTGG TATTCAATCA TGATTACTTC CAAAAATAAA TCTGAACTAT GAGACTTTCC AAACCCATCC
ATCATTTGCA ATGAAAATGT AATCATAATT ACTTATCATA TATGCAAATA TCAGTAACTA TAACAGATTC TGGTGTTGGC
AATTAAGCAG CACTGAATAA AAACCAGACT GATGATTCTG AAAACTTATC AGGTAGTGGG GACACAGGGA TATGCTGCCC
CAGAGTACGT TCAGACGGGT CATCTGAAAG TTCAGAGTGA TATTTGGAGT TTTGGTGTGG TGCTTTATGA GATCCTCACA
GGGAGACGTG CATTGAATAG AAACCGTCCA ATAGGAGAAC AAAAGCTTGT AGAATGGGTT AAACATTACC CTGCCAACAG
TAGCAGGTTC AGCACCATCA TCGACCGACG TCTCAATAAC CAATACTCTC TTGCTGCAGC TCGGAAAGTA GCCAACTTGG
CAGATTGCTG CTTGAAGAAG AATCCTGAAG ACAGACCCTC CATGAGTCAG ATAGTGGAAA CCTTGAACCA AGCATTGCAG
GATTCACAAA CCCAAAACAC TTCACCTAAT AACACTCCTA TATCCACACC ATCCAGATTG GTCTCAACTG CTAAATAAAT
GATTATTTTT TTAGTTTCTA TAAAACTGCA GTAGGATCTT TTGTGTCAGC GAATCTGTCC TTAAAATCTC TTCGAGATAC
AAGAGATTCA ACAGGTTAAA GTCTCTTAAG TCATTTTGTT TTGCCTGAAA TGTACCATTG AAAATATCTG TCACTAATTG
TATATTTCCA TCCTCCTCAT TTAGATTGTA TATTTTCGAG TTTCTTACGT CTGTGTTTCT TCTTCTCCCG TAAATGTGAG
TCTAAGTCCC AAGTCCCATA TTAGGAATCC AACAGATTGA TCGGTAATGT GTCGTGTCAA TGAAATTATT GTCGGA

>Vigan.10G197500.01
TCAAATCAAA CATAACCTTT TAACTGTTAA TGTTATGTTT CTGTGTATCA GACGCGGATT TTCACGCGGT TTTCCTCTCA
ATTCCCTTCT TCTTATTGTT CAATTTCCTC TGCTACACGG AACAAACCCG TTTCAATTTT TTCTCTTTCT CCATTTCATT
CGTTTTCGCA TTTTTCAAAC ATAATTTGCT TCATCTGTTT TCATTTTCTC TTGAACGAAC CCTCTGTCTT TCTATACTCT
GTTCTGCTGA GAATTTTAGT AACTTGGATG ATTAGAAAAT GAACTGTTTG TTCTTCAAAA AGAAATCAAA ATCCCACCCA
GAACTCCCAA AGGGACGGAA GAAGAAAAGC CAGGTTGTGA ATGGAGCACC GAAGTCCCCA AGCTCGGTAC CATCGCCGAG
GAGCATAAAA GAATTGTACA GAGAGAAGGA ACAGAGTTAC AGAATTTTCA GTTTAAAAGA GCTTATAGAT GCAACAAATG
GTTTCAATAG CATGCTGAAG ATTGGAGAAG GTGGTTTTGG AAAAGTATAT AGAGGAACCA TCAGTCCTAA AGATGGAGCT
TCTCCAATTG TAGTCGCAAT AAAAAAACTT AACGCGCATG GCTTACAGGG ACACAAAGAA TGGCTTGCAG AAGTTCAATT
TCTGAGCGTT GCTAACCACC CTAATTTGGT TAAGCTTCTG GGATACTGCT CAATAGACAG TAAAAGAGGA ATCCAACGGT
TGTTGGTATA TGAGTTCATG TCTAACAGGA GTCTGGAAGA TCATCTTTTC AGTGTTTCTT TACCTCCTTT GCCTTGGCCA
ACAAGATTGC AGATCATGCT CGGTGCTGCT CAAGGATTGT ATTATCTCCA CAACGGATTG GAGATTCAGG TGATCTACCG
CGATTTCAAA TCTTCAAACG TGTTGCTGGA CAAGCAATTT CATCCCAAAC TTTCAGATTT TGGTCTTGCA AGAGAGGGTC
CAACAGGTGA CAAGACTCAT GTATCTACTG CGGTAGTGGG GACACAGGGA TATGCTGCCC CAGAGTACGT TCAGACGGGT
CATCTGAAAG TTCAGAGTGA TATTTGGAGT TTTGGTGTGG TGCTTTATGA GATCCTCACA GGGAGACGTG CATTGAATAG
AAACCGTCCA ATAGGAGAAC AAAAGCTTGT AGAATGGGTT AAACATTACC CTGCCAACAG TAGCAGGTTC AGCACCATCA
TCGACCGACG TCTCAATAAC CAATACTCTC TTGCTGCAGC TCGGAAAGTA GCCAACTTGG CAGATTGCTG CTTGAAGAAG
AATCCTGAAG ACAGACCCTC CATGAGTCAG ATAGTGGAAA CCTTGAACCA AGCATTGCAG GATTCACAAA CCCAAAACAC
TTCACCTAAT AACACTCCTA TATCCACACC ATCCAGATTG GTCTCAACTG CTAAATAAAT GATTATTTTT TTAGTTTCTA
TAAAACTGCA GTAGGATCTT TTGTGTCAGC GAATCTGTCC TTAAAATCTC TTCGAGATAC AAGAGATTCA ACAGGTTAAA
GTCTCTTAAG TCATTTTGTT TTGCCTGAAA TGTACCATTG AAAATATCTG TCACTAATTG TATATTTCCA TCCTCCTCAT
TTAGATTGTA TATTTTCGAG TTTCTTACGT CTGTGTTTCT TCTTCTCCCG TAAATGTGAG TCTAAGTCCC AAGTCCCATA
TTAGGAATCC AACAGATTGA TCGGTAATGT GTCGTGTCAA TGAAATTATT GTCGGA

>Vigan.10G197500.01
ATGAACTGTT TGTTCTTCAA AAAGAAATCA AAATCCCACC CAGAACTCCC AAAGGGACGG AAGAAGAAAA GCCAGGTTGT
GAATGGAGCA CCGAAGTCCC CAAGCTCGGT ACCATCGCCG AGGAGCATAA AAGAATTGTA CAGAGAGAAG GAACAGAGTT
ACAGAATTTT CAGTTTAAAA GAGCTTATAG ATGCAACAAA TGGTTTCAAT AGCATGCTGA AGATTGGAGA AGGTGGTTTT
GGAAAAGTAT ATAGAGGAAC CATCAGTCCT AAAGATGGAG CTTCTCCAAT TGTAGTCGCA ATAAAAAAAC TTAACGCGCA
TGGCTTACAG GGACACAAAG AATGGCTTGC AGAAGTTCAA TTTCTGAGCG TTGCTAACCA CCCTAATTTG GTTAAGCTTC
TGGGATACTG CTCAATAGAC AGTAAAAGAG GAATCCAACG GTTGTTGGTA TATGAGTTCA TGTCTAACAG GAGTCTGGAA
GATCATCTTT TCAGTGTTTC TTTACCTCCT TTGCCTTGGC CAACAAGATT GCAGATCATG CTCGGTGCTG CTCAAGGATT
GTATTATCTC CACAACGGAT TGGAGATTCA GGTGATCTAC CGCGATTTCA AATCTTCAAA CGTGTTGCTG GACAAGCAAT
TTCATCCCAA ACTTTCAGAT TTTGGTCTTG CAAGAGAGGG TCCAACAGGT GACAAGACTC ATGTATCTAC TGCGGTAGTG
GGGACACAGG GATATGCTGC CCCAGAGTAC GTTCAGACGG GTCATCTGAA AGTTCAGAGT GATATTTGGA GTTTTGGTGT
GGTGCTTTAT GAGATCCTCA CAGGGAGACG TGCATTGAAT AGAAACCGTC CAATAGGAGA ACAAAAGCTT GTAGAATGGG
TTAAACATTA CCCTGCCAAC AGTAGCAGGT TCAGCACCAT CATCGACCGA CGTCTCAATA ACCAATACTC TCTTGCTGCA
GCTCGGAAAG TAGCCAACTT GGCAGATTGC TGCTTGAAGA AGAATCCTGA AGACAGACCC TCCATGAGTC AGATAGTGGA
AACCTTGAAC CAAGCATTGC AGGATTCACA AACCCAAAAC ACTTCACCTA ATAACACTCC TATATCCACA CCATCCAGAT
TGGTCTCAAC TGCTAAATAA 

>Vigan.10G197500.01
MNCLFFKKKS KSHPELPKGR KKKSQVVNGA PKSPSSVPSP RSIKELYREK EQSYRIFSLK ELIDATNGFN SMLKIGEGGF
GKVYRGTISP KDGASPIVVA IKKLNAHGLQ GHKEWLAEVQ FLSVANHPNL VKLLGYCSID SKRGIQRLLV YEFMSNRSLE
DHLFSVSLPP LPWPTRLQIM LGAAQGLYYL HNGLEIQVIY RDFKSSNVLL DKQFHPKLSD FGLAREGPTG DKTHVSTAVV
GTQGYAAPEY VQTGHLKVQS DIWSFGVVLY EILTGRRALN RNRPIGEQKL VEWVKHYPAN SSRFSTIIDR RLNNQYSLAA
ARKVANLADC CLKKNPEDRP SMSQIVETLN QALQDSQTQN TSPNNTPIST PSRLVSTAK*