GBrowse Details

Vigan.10G141800.01

Basic Information:
Name: Vigan.10G141800.01
Multiple alignment
Variant Information
Position: Chr10:19994784..20000583 (+ strand)
Length: 5800
Functional Information:
Description: Similar to Uncharacterized protein. [I1J8D1, Glycine max]
InterPro: RWP-RK domain (IPR003035)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.15,0.21,1.59,1.01,0.22,0.97,0.59,1.86
Arabidopsis thaliana homolog: AT4G35590.1
Structure :
Position: Chr10:19994784..19994952 (+ strand)
Length: 169
Type: five_prime_UTR
Position: Chr10:19994953..19995025 (+ strand)
Length: 73
Type: CDS
Position: Chr10:19995173..19995422 (+ strand)
Length: 250
Type: CDS
Position: Chr10:19997798..19998045 (+ strand)
Length: 248
Type: CDS
Position: Chr10:19998553..19998767 (+ strand)
Length: 215
Type: CDS
Position: Chr10:19999489..19999701 (+ strand)
Length: 213
Type: CDS
Position: Chr10:19999702..20000583 (+ strand)
Length: 882
Type: three_prime_UTR

>Vigan.10G141800.01 class=Sequence position=Chr10:19994784..20000583 (+ strand)
ATTTTAGCTG GGCATGATTC TAAACTGATC CGAAACCAAC GAAAAAAGCG GAAGATCATG CAACCTTGCA CTTAAAAAGC
TGGTTTTTGC ATCCTTCTAT CAGTCCACGC TTCATGCTTC TTCTTACCCA TTACTCATTT CACATTCTCA TGCCATCTTC
CATCTCTTCA TGGATTCCTC GCCGACCAAC AATACCACTT TGCTCACCAA CTTACTACTC TTCAATAACA CCGTCCAACC
AGGTCATATC ACAAGCCATC AGATTTTTCT TACTTGTTAT TTTCATCACA TGTTTTGTTT TTTATACAAA GAAATGATTT
TTCTTTGTGG GGTGCTGAAA TTTCGTTATT TATTTGTCTA TTTCTGTTGT GGGGGTGTGT GGATTGCAGA GTTGATGAGG
AGCCTGCATG TGTACCGGCA AGGGGATGAA GAGGAAAGGG CAGTTGAGAG GGAGTTTTTG TTTTCAGAGT GTGGATCCTA
TGTGGAAATG CAGGCTACCC CAATTCTTAA ATTTGTGAAA TCCCATGTTT CTCAAGTGTT CCAAGGGTAC AAGAATGGAG
TGTGGCTTTG TATCTTTGCA TTTCATGATG ATCACACTCC TCGATTTTGC CGCATTCCTC CGCTTTTGTT GGTCTCAAGG
TATATCTTCT TAGCCCATGT TTGTCTTTGA CATTAGTCCT GAGGTTCAAA AAAAGGTCTG CAGCAGAAAT CAGCAAGTTT
TGGAGTCAAT GTGGTCACAA TTCCGGCTGC ATGCCATATT TGTCTGCAAT TTCGCATTAA TCCCTAGGTT TTGAGAAAGG
GTGTGCAGCA GAAATTGGCT AGTTTTGGAG TCATTTTCAT CACAATTGTG TTAGCGTTCA GCAATTTGAC ATTAGTCCCA
AGGTTTTGAA AAACAGTCTG GGGCAGAAAT GGGCAAGTTT TTGATCCATT AAGATCATGA TCGCAGCTGG TGTGGCCGAT
TTTTGTCACA TCAAGGATTC CCAACAAAAA TTGTATCCCC GAATCGTAGT CTAAAGCCTT GCATAAGTCC TACATAGTTA
GCCTTGTTTG GTCCTTTGAA TAATAGAACA CTTCCATCTA GTGAATTGGA ATTGGTCCCT TTGAATAGAT GATTATGTAC
TAAGCTCTTA GAGAGCTCAA CAAGATTTCC CCACCTTAAA TCAATCACAT TTGAAAATCG AGAGTCAAAA TTTTGTAATG
TGTTAAATTG GATTGATACA TGCATTCTAA CCAAAGGCTA CTTTTGGGTT GTAAACTTAT AAATGATAAA GGAGAGGGAT
GTGAATTCTC TGTTTTTCTT CACTAGATGT TCTCTTCACT TGTTAGAGTG AAAGGTATTA AACTCTTTGA CATATAACTG
GCAGACCTCT TCACAAGAAA TGGTGGGTCA CTTCCTAGTA ACAGTTTTTT TCCTTCTCAT GACACATCCT TTCTTAAAAG
ATCCAATTTC ATTTACAAGT CCAGTTTATT GGAGTAGAAA ACTCTGGTAG TGTCCCCAAA TTTCTTTATG TATGTATGTG
GCAGTTAGTC GCTAATTATT CTAGAGCAGG AAAAGTTGAA ATAGCAGGAA GTGAAATGCC CATGGACTGA TATTAAATTT
AGAAAATATA TTCCCCTAGC TTTTTATAGT CCCTATGAGT GATGGTATTT TCATTTATAA TTCTCACAAC AAAAGGAGAT
ACAGGGAAAG AAGATAGAGA AGTGTGAGAC TTTGCGAATG ATGTTATAAA GTGTTCTGAG AGTCTTAAGT GGGAATGGCA
TTAATGCTAT TTTACTGGTT AGATGCATAA CAAACAGAAC AAATCTAATG CTTCATACTA GAATAAGCAA AGTTTAGTAA
GTGACAGCAT CTTTGGATGA AGCAACTGAT GTTTGCTTTT ACTGAAAAAG AAACGTAGAT GGGTTTTAAA GGTGAAAACT
GGGGATGCCC TTTCCTCCAA CCACCCAAAA ATTGGAGATG CATGCACAGA TCTTCTTGTA GAATTTTCTT TTCCATCTAT
CAGAATTTTC TTTTCCATCT ATCAGAATTT TCTTGTCTTC CTGTGGTAAG ACAATGTGAT ATGTTCACTT AACCATTTTC
TAATATGGCA TTCAGATTTA TCTTTCCTTT GGAAATATTA TATTTATATA ACTGGTTTAC TGGGACATAA AAGAATAACT
AATACTTCCT TGTTTACACT TTGAGGAGGA AAGGGAATCA AGAATAAAGT TGATACTTTA TGTATGAAGC TGAAATACTT
GAATATATGC TTTGCATTTT ATTTAAATTT TAAAGAAAAG GAATGGAATA GAGTAGACCA ATGCCTCTCC AATCTCCATC
CCCCTCACAA AAAGTTTATT TTTTACCCTT CAAATTGAAG AGGACAAGGT GATATCGAAA CATGTACTGT ATGTTCTTAG
AAAAAGGGTA TTTTTCATAA CTTTCTCTAT AATATCAATT TGAGGGGAAG GTATCCCTTA GTACCTTTAA TTTCTGGAAA
CAGGTAACTT CATATTTTAA CTCTCCTTAA CTTTTCTTTT CGCTCTAAAA TACTCTAAGA CTTATCTCCT ATTTTTTTAA
TATGAACTTC CAAATATCCA TGTTTTATAC TGTTTTCCCT TACTGGGTTT TAAACATCAT TTATTCATTG TCTTCATATT
CATAGTTGAG TAAAAAGCCT ATTGGATTTT CTGGATTTCA TTGAAATACC ACAGTCCAAT TCTTTTTTGT CTGGAATGAC
ATTATCTGCA AATTGCATAA TTATGCATGC ATTTTGAGCA CTGTTGTTGT GTTTGATATG AAATCCCTAT TTTCTTAACA
GCCTTATCTT GAAATCCCTA TTTCACTGTA TCATAAACTT CAGGTGATCA CAACCTTGAC AATTGTATGA CTCCAAAATA
TCTCTCTACA CAACTGCGGC ACCACATTTA CAAATTTAAA ATTTTCTAGG CTTCTCCATT TTGTTTTTGA GTACTTCTAC
GAAGTAACTT ATCATTTATC TAACTCACTC TTATTATTCA TTTTGAGTTT TCAGAAACCC AAAGCTTCAG ATGGTTCCAA
ACTTGCTCCA TGATCTCCAC GTGATATACA AGTTGGACAG GAAGGAGGAA GACAAAGATA CAACTCTAGG ATCTACAGGG
GAAGAATGTC AAGGGAACAG CAACAATTTC CAACCATCAG AAAAAGTCTT TCCCGTTCTT GATCAGGATC TCAATTATCT
TCCTTACGAA GAAGATGAGT CTGAGTTACT AGACAATGAG ACAGATGTTG AAAGTTCACC AGGTTCCGTC AACACTCTTG
CAGTTTTTTC TGCAGCTTTG CTACTATATG GACATATTGA ATCTTTAGAT TCGCTTGGTG AAACCTAAGT GTTACAGTAT
ATTGAAGTTC AAGTGTTTAC TATCATGACT ATATTGTTGT CATAAGTTGT AACTTAAATC TACGGTTCTG AATTGCTAAT
AAAATATATG AATCCTCTCA GATGATTGCA CTGATGGAGT GTATACCATG TTGCTCCCAA TTTTGATGCC ATTCCCTTTG
TTCCAGCAGC TCATTATTTG TATGCACTTC ATCTATTAAA AAGGAATTTT GGATACTATA TATTTTAGTG CAGCACGTAC
TTTGCAAAGT GACATTTGCT TCACCTCCTT AAATGAAATC ACTGAGCTTG ACTAGGATTA GTTGGGCACC AAAAATAAAA
AAAAGTTTCC TATGTGAAGC TTTCTAATGT TGAGTTAATA ATGCGATGCA TAATGATTTA TATCTAACAG ATGAGGAGTG
AGTTTGCAGG TTTGCTAGGG AAAAAAAAGA GGGCACCCAG TGACCTGGTA GCAAAAATTT CCTTATCAGA TTTGGTCCAG
TACTTTGGTA TGCCAATCGT AGAAGCATCA AGAAATCTAA ATGTTGGGCT TACTGTTCTC AAGAGAAAGT GCAGAGAATT
TGGTATTCCC CGCTGGCCTC ATAGGAAGAT CAAGTCACTT GATAGTCTCA TTCATGATCT TCAGGTCCTT CCTTCTTGCT
TCGCCTTTCT AATTTGATGA ACTTTAACAC TCTGTATTCT GATTGCTTAC TCATTTCAAG AAATATTTTA TTCATTTACA
GCCCCTACTT GAACTTTATT TATTTGAACA TCAGCGTAAT TTCGTTGAAG TGCATGCAAC CTACTTGTTC AACTAATCTT
ATTATTTGAA ATATAACTAA TCGTATTTTG AACTGATATT ATTATAATGA GGGAGTGAGT GGAGATCGGT AGCCAACATG
ATTGATCTTA TTTGATTCAA TATCAGTTGA TATCTTGTTT AAGGTTCAAT CCACAATGTT AGTTTTCACA TTTTGAAGAC
ATGGAATGGG TGAAACTGAA AGCATGCTGA AGTGCACTTT GAAGCATTAT TCTGCAAAAT TTTGTTATAG TTTTGGTCAA
ATCTATCACA TTCAATATAT CGAGTTCATT TGAAATTAAG TATTATATGT ATAGTCTTCG GTAGATAGGT GAACTTTGAC
ATTAGCGCAT AATTTTGTTG ATTAGTTTTA TGTTCCCATT TGATCTATAA ATCTTTGCGT TCTGTTTCGT CTACTTTTGT
GCTTCCCTTT TGAGTAAAAT ACTTAAATTT TGCCAACGTT GTAATCTCGA GTTCTATTGA ATTTTGAACT CCTCCAACAC
AGATAATAAA AAATGGTTTG TATTTAGGCA ACATTGACTG ATTGACAAAG GTGGAACACA TGCAGGAAGA GGCAAAGAGC
CAAGAATTGG AGGACATGGA AGCAGCAATG GCAGTGGCCA AGAGACAAAG GATGTTGGAG TGTGAAAAGG AAAACATAGA
GAAGAAGCCC TTCATGGACA TTCAAACCGA AACAAAGAGG TTCAGGCAAG ATGTTTTCAA GAGAAGACAC AGAGCAAGAG
CTGTTGGAAA ACATAATTCT ACAGTATCCA ACACATAGCA CAATGTAAAG AATGAAAGAG CAACATAAAC CATAGTTCTC
ACGTTGTAGA ATGAGATGAA AGTTGAAACC TCTACACCCC TTCTAACAGG GCATTTTGAC CCTCAGAAAT TTACTTTTGA
CTTATATATA GATTTCAATA TCCAAAGGAA GTGCTCAATT CCCTTTTGTC TTTTTTTCCC CTCTTAATCA TTGCTTCTAC
AGTTCTGATT GTATAATTAT AAGATTTATT ACTCTAACGT TGACCCGGAA AGCATTAAAA TTTGATGAAC GTGGATCATA
CTTAAGCAGT TTTGGAAAAC AGGCAACTAG GAGTTGTTTT GGGTTGAAAG CACTTTGTTT AGCCAATCTC ATCGCTTCAG
GTGTTAGGTG ATGTATAAAG CAAAACACTC ATGAAAGGTT CCATTTGATT GAGTTGGGTC TTATACATGA ATGATGATAT
TCTTAATTTC CACGAAGCTG TCATAGGTAC GTGCGCTTGC TTACATTGCA TTGCAGCAAA AACTGATAGC CACTTTGATT
GGTTAAATTC AAAGTTAAGG ATAATGCTAT GCGGGCGTGT CGTATTTGAT GTGTCTCTGT CCACTAACTT GATTTGTTTT
TTGTAGATGT TTATGCAGCA CTTTCCGCGA CGATGATTTG GATCTACGAA TAAACAAATA TAGTGAGACA AAACACGTTA
TTTGGAGTCC ATGTTTTGTT CCGCGGAAGA CCACATTCTA GTTAACTTCC TCCTTCGACG AAAAAAACCC CAATGATGTT
AACCTTTTGC GTTGTTCGCT CTCTCAAGTT GTTGTGCTGC TTGTAGTGTG TGCGGTGCAG CTGTTTTTTT TTCTTTTTTC
TTTTTAGAAT CAAGTAAAAT TTCCATATAT CAAACAAAAG 

>Vigan.10G141800.01
ATTTTAGCTG GGCATGATTC TAAACTGATC CGAAACCAAC GAAAAAAGCG GAAGATCATG CAACCTTGCA CTTAAAAAGC
TGGTTTTTGC ATCCTTCTAT CAGTCCACGC TTCATGCTTC TTCTTACCCA TTACTCATTT CACATTCTCA TGCCATCTTC
CATCTCTTCA TGGATTCCTC GCCGACCAAC AATACCACTT TGCTCACCAA CTTACTACTC TTCAATAACA CCGTCCAACC
AGAGTTGATG AGGAGCCTGC ATGTGTACCG GCAAGGGGAT GAAGAGGAAA GGGCAGTTGA GAGGGAGTTT TTGTTTTCAG
AGTGTGGATC CTATGTGGAA ATGCAGGCTA CCCCAATTCT TAAATTTGTG AAATCCCATG TTTCTCAAGT GTTCCAAGGG
TACAAGAATG GAGTGTGGCT TTGTATCTTT GCATTTCATG ATGATCACAC TCCTCGATTT TGCCGCATTC CTCCGCTTTT
GTTGGTCTCA AGAAACCCAA AGCTTCAGAT GGTTCCAAAC TTGCTCCATG ATCTCCACGT GATATACAAG TTGGACAGGA
AGGAGGAAGA CAAAGATACA ACTCTAGGAT CTACAGGGGA AGAATGTCAA GGGAACAGCA ACAATTTCCA ACCATCAGAA
AAAGTCTTTC CCGTTCTTGA TCAGGATCTC AATTATCTTC CTTACGAAGA AGATGAGTCT GAGTTACTAG ACAATGAGAC
AGATGTTGAA AGTTCACCAG GTTTGCTAGG GAAAAAAAAG AGGGCACCCA GTGACCTGGT AGCAAAAATT TCCTTATCAG
ATTTGGTCCA GTACTTTGGT ATGCCAATCG TAGAAGCATC AAGAAATCTA AATGTTGGGC TTACTGTTCT CAAGAGAAAG
TGCAGAGAAT TTGGTATTCC CCGCTGGCCT CATAGGAAGA TCAAGTCACT TGATAGTCTC ATTCATGATC TTCAGGAAGA
GGCAAAGAGC CAAGAATTGG AGGACATGGA AGCAGCAATG GCAGTGGCCA AGAGACAAAG GATGTTGGAG TGTGAAAAGG
AAAACATAGA GAAGAAGCCC TTCATGGACA TTCAAACCGA AACAAAGAGG TTCAGGCAAG ATGTTTTCAA GAGAAGACAC
AGAGCAAGAG CTGTTGGAAA ACATAATTCT ACAGTATCCA ACACATAGCA CAATGTAAAG AATGAAAGAG CAACATAAAC
CATAGTTCTC ACGTTGTAGA ATGAGATGAA AGTTGAAACC TCTACACCCC TTCTAACAGG GCATTTTGAC CCTCAGAAAT
TTACTTTTGA CTTATATATA GATTTCAATA TCCAAAGGAA GTGCTCAATT CCCTTTTGTC TTTTTTTCCC CTCTTAATCA
TTGCTTCTAC AGTTCTGATT GTATAATTAT AAGATTTATT ACTCTAACGT TGACCCGGAA AGCATTAAAA TTTGATGAAC
GTGGATCATA CTTAAGCAGT TTTGGAAAAC AGGCAACTAG GAGTTGTTTT GGGTTGAAAG CACTTTGTTT AGCCAATCTC
ATCGCTTCAG GTGTTAGGTG ATGTATAAAG CAAAACACTC ATGAAAGGTT CCATTTGATT GAGTTGGGTC TTATACATGA
ATGATGATAT TCTTAATTTC CACGAAGCTG TCATAGGTAC GTGCGCTTGC TTACATTGCA TTGCAGCAAA AACTGATAGC
CACTTTGATT GGTTAAATTC AAAGTTAAGG ATAATGCTAT GCGGGCGTGT CGTATTTGAT GTGTCTCTGT CCACTAACTT
GATTTGTTTT TTGTAGATGT TTATGCAGCA CTTTCCGCGA CGATGATTTG GATCTACGAA TAAACAAATA TAGTGAGACA
AAACACGTTA TTTGGAGTCC ATGTTTTGTT CCGCGGAAGA CCACATTCTA GTTAACTTCC TCCTTCGACG AAAAAAACCC
CAATGATGTT AACCTTTTGC GTTGTTCGCT CTCTCAAGTT GTTGTGCTGC TTGTAGTGTG TGCGGTGCAG CTGTTTTTTT
TTCTTTTTTC TTTTTAGAAT CAAGTAAAAT TTCCATATAT CAAACAAAAG 

>Vigan.10G141800.01
ATGGATTCCT CGCCGACCAA CAATACCACT TTGCTCACCA ACTTACTACT CTTCAATAAC ACCGTCCAAC CAGAGTTGAT
GAGGAGCCTG CATGTGTACC GGCAAGGGGA TGAAGAGGAA AGGGCAGTTG AGAGGGAGTT TTTGTTTTCA GAGTGTGGAT
CCTATGTGGA AATGCAGGCT ACCCCAATTC TTAAATTTGT GAAATCCCAT GTTTCTCAAG TGTTCCAAGG GTACAAGAAT
GGAGTGTGGC TTTGTATCTT TGCATTTCAT GATGATCACA CTCCTCGATT TTGCCGCATT CCTCCGCTTT TGTTGGTCTC
AAGAAACCCA AAGCTTCAGA TGGTTCCAAA CTTGCTCCAT GATCTCCACG TGATATACAA GTTGGACAGG AAGGAGGAAG
ACAAAGATAC AACTCTAGGA TCTACAGGGG AAGAATGTCA AGGGAACAGC AACAATTTCC AACCATCAGA AAAAGTCTTT
CCCGTTCTTG ATCAGGATCT CAATTATCTT CCTTACGAAG AAGATGAGTC TGAGTTACTA GACAATGAGA CAGATGTTGA
AAGTTCACCA GGTTTGCTAG GGAAAAAAAA GAGGGCACCC AGTGACCTGG TAGCAAAAAT TTCCTTATCA GATTTGGTCC
AGTACTTTGG TATGCCAATC GTAGAAGCAT CAAGAAATCT AAATGTTGGG CTTACTGTTC TCAAGAGAAA GTGCAGAGAA
TTTGGTATTC CCCGCTGGCC TCATAGGAAG ATCAAGTCAC TTGATAGTCT CATTCATGAT CTTCAGGAAG AGGCAAAGAG
CCAAGAATTG GAGGACATGG AAGCAGCAAT GGCAGTGGCC AAGAGACAAA GGATGTTGGA GTGTGAAAAG GAAAACATAG
AGAAGAAGCC CTTCATGGAC ATTCAAACCG AAACAAAGAG GTTCAGGCAA GATGTTTTCA AGAGAAGACA CAGAGCAAGA
GCTGTTGGAA AACATAATTC TACAGTATCC AACACATAG

>Vigan.10G141800.01
MDSSPTNNTT LLTNLLLFNN TVQPELMRSL HVYRQGDEEE RAVEREFLFS ECGSYVEMQA TPILKFVKSH VSQVFQGYKN
GVWLCIFAFH DDHTPRFCRI PPLLLVSRNP KLQMVPNLLH DLHVIYKLDR KEEDKDTTLG STGEECQGNS NNFQPSEKVF
PVLDQDLNYL PYEEDESELL DNETDVESSP GLLGKKKRAP SDLVAKISLS DLVQYFGMPI VEASRNLNVG LTVLKRKCRE
FGIPRWPHRK IKSLDSLIHD LQEEAKSQEL EDMEAAMAVA KRQRMLECEK ENIEKKPFMD IQTETKRFRQ DVFKRRHRAR
AVGKHNSTVS NT*