GBrowse Details

Vigan.10G065800.01

Basic Information:
Name: Vigan.10G065800.01
Multiple alignment
Variant Information
Position: Chr10:7073619..7077772 (- strand)
Length: 4154
Functional Information:
Description: Similar to Uncharacterized protein. [V7CHE5, Phaseolus vulgaris]
GO: Biological Process: fatty acid biosynthetic process (GO:0006633)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: oxidoreductase activity (GO:0016491)
InterPro: Fatty acid hydroxylase (IPR006694)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:35.41,11.48,17.47,24.92,110.05,21.63,70.30,15.44
Arabidopsis thaliana homolog: AT1G14290.1
Automatic updates:
Name: BT096756 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-21K13 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:7073619..7074171 (- strand)
Length: 553
Type: three_prime_UTR
Position: Chr10:7074172..7074726 (- strand)
Length: 555
Type: CDS
Position: Chr10:7076975..7077199 (- strand)
Length: 225
Type: CDS
Position: Chr10:7077200..7077772 (- strand)
Length: 573
Type: five_prime_UTR

>Vigan.10G065800.01 class=Sequence position=Chr10:7073619..7077772 (- strand)
AGGTTCCCCA CCTTAACCGG TCAAACTCGG CGTCGTTTCG ATAATCCCAT AAAGCCCACG TTTCTAATCG TCTGCATACG
CACCCACATA AATTCCCTAA TCCAACCAAT TAAAAAACAG TTTCCACTAA CAAACTCCAC TGCTTTTTCT ACACGTGGAG
GTAACCACCG TAACGGAATA CGCCCCCACG CACAAGATCG CACGATATTT TCTTTCCCAG AGCGTGAAGA GTCACCACCC
TGCAAGCATT TTCGACATTT CTTTCTCTTC TCTCTCTCTT TGGAATCTTC CTTCTGCGCG GAACCCTAAC TCTGTTATGT
ACCTACTCAT TATTTAATTG GGTCGTTTTT ATAATTGGGG TTGCCGGCTT GACCAATCAA TCATTTCGGG TTGGAGGAAC
AAGAGGAGTG AGGGGTTCAC TTTTACGGTT TTTAATTAGG GTTCTTTGTC TTGTGCCGAT CTTGTCATTT CTTGATTCTC
TGATATTGAT GCAAATTTTG GGTCTGGTGG GTGATTGTTA AATCAAATCC GCGGAAAGTA TTGTTTTTTT TTTCCTTCCT
CTGGGGTCGT GGAATGGATT TGGGGGTTTC TGATGAGATG TTAGGCACTT TTGTGCCTAT AGTAGTTTAC TGGATTTATT
CTGGGATTTA CGTTGTTTTG GGGTCGTTTG CTGAAAGTTA TCGGTTACAT TCGAAGCAGG AAGAGGACGA AAAAAATTTG
GTGTCAAAGG GTGCTGTGGT TAAAGGTGTT CTTCTTCAAC AACTAGTTCA GGCCGTGGTT GCAACCCTCT TGTTTGCGGT
AAGTTTTTCG AGGTGTGATA AGTTTGCAGT TTCTTTCTTT TTTTAATGAT TTTTCTACGA GAAGATGCAT TAATGAAGTC
AATCTTGCAT TGCCGAAACG GCTTTTAAGA CGTTTAATTG CTCAACACGT TTATGTTTTG GCTCCTTTAT GCCTTTTGGG
TAATGCTAGA CGCTATGCAC AAGACAAACT GTTTTCGTTC CTTTTTGGTT GGTTGTGTTT ATTACTTCAC TAGTAACACT
CCTTTACAAA GATTTTGTGT GCTTGATCTA GTATGGTGTG CAATAATGAT ATTGTTTTTT TCTATTATTG ATTATGATAA
GGTTTGATTG CTATTTGGCA TATGTGAGTT TAGTACTCTA TTCTCCATTA GAGGTTGAAC ATTTATTGCG TGTGTGGTTG
AATTGTTGTT TGACCTGTGT GTTTATCATA GGCTACTTCA TAAGGGATAG TTTGTGGCTA TAGATACTTT AATGGGTTAT
TCTTGGAGCC TTTTCTTAAT GGTAGTAAAT ATGCTATTAG CCCAAAACGA GTTTCTTACC TTCAAAAAAG ATAACGTGTG
CTGAGCTCCA GAGAAAAAAG TTTCTTTGAG GGGTGGATGG TGTTGGTTTT GCCCCGATTG AGCAAAAGAT TTAGAAAATC
GGTTAAGGTA GATCGAATTA GATTGCATTA TTTTTAGTCC AGTGAAAAGT AGAAGAGAGA CTAAAACAGG GTTAAGGCCT
AATAGTTGTT TGGTGGAAGG AAAAAAAAAT TCGTTTCATT TAATCATGAA TACTTAGAGT CATTATTCGA TGAATGATTA
GAATCTATTT GATTGGTCAT AAATTATAAA ATATTTATTA TTTGTTAAGT TTATAATGAA ATCATTTATA GTTGTATTAA
ATGAGGAAAT AAGGGAATGT AATTGTGTCG TATTTTTACA GCATAAATAA CATGTTTGAA AAAGCTTATG ACAGCATAAT
AAGTTCTTTA TAAAAATATA AAATAAATTC TTAAAAAATC GTAATATTTG GAACATTAGT TGACATTTAA TAACTTTTTT
TTCTCTGAAA AATAAATTAT TTTCATGATC TGAAAATTTG TAGCTTATGA TTATTTTCTA ACAGCCTTTT CCCTTTTAGC
TTGAAACACA CTCTTATGTA AAACTGAAGT TTTTTTTTCT TTTACATTTA AACAAAATTA ATTATTTTAG AACTACCCTT
TTAGCAAACT TACCCTACGT AAACTGATTT TTTATTATAA TTGATTAATG AAATTATTAA ATTTTCACAG TTGTCCAATC
ACATCCGATA ATTTAACTTT TCTCTCAGCT TGGGAAAGTT AGATTCCCAC TTATCACATT ATAATTACTT TGTTAGAAAT
ATGTAAAAAA ATTATTGGTA AACAATGTTT CTTAGTAATT ATATATATAT TTTTTATATA AGAAACAAAC ATTTTCAACG
TCTGATTCCT GGGAAACTAA ATATTGTCCT TGTACCAAAT GTCACCTTAG TGTCCTCTTC AGCTTCCCCT GACTAAAGAG
GACATATGCT CTTGATTATA TTTTTATAAT TCTTTAAGTG CTCCTCATTT GCTACACCTG ATTTTATCTT TTAAATTTTT
TTTGATTGCT TGGGGACGTT GAAATATATA TACTAATAGT AGGATTCTGT TCCCCTTATA TAAAAATGAT ATCCTAATGG
ATTTTTCACT TATTTGCTGT TTGACTGAAG TATGTCAAGC GGATTTTTAA GAACTTTACG GCTATGAAAA AAAATTAAAT
TTTCACATGC ATGACATTTG TAAGAAATGT AACATTTTTT TATAAGCAGA AGAGATATAT AATTGTATTC AGTATTATGA
AAGAAAGTTA AAGTATTCCC TACTCCCTCT GCCCCTGCTA ACCTTAATCT TTCTTGAGTA AAGAAACACA TTAAACAAAA
TAATCCAGCT TTAATGAAAC TGTTTGCTTA TTGCATGGTT GTCCGAGCTC TGGGGCATGT ATGCATTAAA CACTTTGAGG
AGAAATTTTG TTGTTCATAG TAGGTTTATC TTTAGTAGTA TTGCTTCTTG TGGTCTCATC CCTAAAATAT TCTTTGATAC
TACAATAAAT TCTCTTAGAC AGAAAAATTA CCAGTTTATG GAGTGTTCTG TTCTGTGAAA TTTTATCACG TAATTCATTG
ATCCAATTGT AGCTTTTGTG TATAATATAG GACATGTGAT TGGTTCTGGA TAACAAAATT GTAATTGATT TTTGTTAATT
GTGTAGCTGA CAGGAAGTGA TAACCAAAAT ACGACCAGCC AGAATACTTC TCTACTTGTT TTAGCAAGAC AATTTGTTAC
TGCTATGCTT GTAATGGACG CATGGCAATA CTTCATGCAC AGATACATGC ATCACAACAA GTTCCTATAC AAACATATCC
ACTCTCTGCA TCACAGACTC ATTGTACCCT ATTCATATGG AGCTCTATAC AATCACCCTG TGGAGGGGCT TCTGAATGAC
ACTGTTGGTG GTGCTTTATC GTTCTTAGTC TCCGGGATGA GTCCTCGAGC CTCCATTTTC TTCTTCTCGT TTGCCACCAT
TAAAACTGTT GATGATCACT GTGGGTTATT GCTCCCCGGA AACCTTTTCC ATATATTTTT CAAAAACAAC TCGGCCTATC
ATGATGTACA CCATCAACTC TATGGCAACA AGTACAACTT CTCACAGCCA TTCTTCATCA TGTGGGACAG AATCTTGGGT
ACCTACATGC CATACACATT GGAGGAGAGG GAAGGTGGTG GTTTTGAAAC TAAACCTTGC AAAGATTACA AGGATGATTA
ACTTTTTAGC TTGATGAGCA TCCTTTATCT GTACTAGTAT CCTTTTCTCC GGTATGAGCA GCACTGCCAC AGTAATCATG
TGATGCCTGT ATATACATAT GATGTGTCCT GTTCTATATT TTTATTTTTG TTTCCCCTAT GTCCATACTA GATAGACATA
ATAAAGGAAA TTGAGGTACT ACCTATTACC ATTTGATTTT CACCCTTGTA TTGCTTGCTG CTACACTCAT AGTTATACCT
TGTATCCCTC ATGTCTTACA ATGTTTAACT TGCCTACGAA TGCCATCTTT GATGTCCTAA TACTTAATCT GTCTTGCTGA
ATTTTCTGTC TGGTTCTATT TTTTTAGCAC GGTTATTTAA TGAATATTGC ATCTGTAAAA TGGACCTCTG TCTAATCATG
TACAGGGTGG ACTCCTTCAT TTTGATGATT GAATGAGATA GGTGAATGTA TCTGCTAACC ATTTGTATTC TAGCGAACTC
TTAATTGTTT TTGGGGGGAA AATGCCAAAT TTGCTTAAGC TTCTTCTTTG TCAAATTATT GAGCTGTCTC ACCC

>Vigan.10G065800.01
AGGTTCCCCA CCTTAACCGG TCAAACTCGG CGTCGTTTCG ATAATCCCAT AAAGCCCACG TTTCTAATCG TCTGCATACG
CACCCACATA AATTCCCTAA TCCAACCAAT TAAAAAACAG TTTCCACTAA CAAACTCCAC TGCTTTTTCT ACACGTGGAG
GTAACCACCG TAACGGAATA CGCCCCCACG CACAAGATCG CACGATATTT TCTTTCCCAG AGCGTGAAGA GTCACCACCC
TGCAAGCATT TTCGACATTT CTTTCTCTTC TCTCTCTCTT TGGAATCTTC CTTCTGCGCG GAACCCTAAC TCTGTTATGT
ACCTACTCAT TATTTAATTG GGTCGTTTTT ATAATTGGGG TTGCCGGCTT GACCAATCAA TCATTTCGGG TTGGAGGAAC
AAGAGGAGTG AGGGGTTCAC TTTTACGGTT TTTAATTAGG GTTCTTTGTC TTGTGCCGAT CTTGTCATTT CTTGATTCTC
TGATATTGAT GCAAATTTTG GGTCTGGTGG GTGATTGTTA AATCAAATCC GCGGAAAGTA TTGTTTTTTT TTTCCTTCCT
CTGGGGTCGT GGAATGGATT TGGGGGTTTC TGATGAGATG TTAGGCACTT TTGTGCCTAT AGTAGTTTAC TGGATTTATT
CTGGGATTTA CGTTGTTTTG GGGTCGTTTG CTGAAAGTTA TCGGTTACAT TCGAAGCAGG AAGAGGACGA AAAAAATTTG
GTGTCAAAGG GTGCTGTGGT TAAAGGTGTT CTTCTTCAAC AACTAGTTCA GGCCGTGGTT GCAACCCTCT TGTTTGCGCT
GACAGGAAGT GATAACCAAA ATACGACCAG CCAGAATACT TCTCTACTTG TTTTAGCAAG ACAATTTGTT ACTGCTATGC
TTGTAATGGA CGCATGGCAA TACTTCATGC ACAGATACAT GCATCACAAC AAGTTCCTAT ACAAACATAT CCACTCTCTG
CATCACAGAC TCATTGTACC CTATTCATAT GGAGCTCTAT ACAATCACCC TGTGGAGGGG CTTCTGAATG ACACTGTTGG
TGGTGCTTTA TCGTTCTTAG TCTCCGGGAT GAGTCCTCGA GCCTCCATTT TCTTCTTCTC GTTTGCCACC ATTAAAACTG
TTGATGATCA CTGTGGGTTA TTGCTCCCCG GAAACCTTTT CCATATATTT TTCAAAAACA ACTCGGCCTA TCATGATGTA
CACCATCAAC TCTATGGCAA CAAGTACAAC TTCTCACAGC CATTCTTCAT CATGTGGGAC AGAATCTTGG GTACCTACAT
GCCATACACA TTGGAGGAGA GGGAAGGTGG TGGTTTTGAA ACTAAACCTT GCAAAGATTA CAAGGATGAT TAACTTTTTA
GCTTGATGAG CATCCTTTAT CTGTACTAGT ATCCTTTTCT CCGGTATGAG CAGCACTGCC ACAGTAATCA TGTGATGCCT
GTATATACAT ATGATGTGTC CTGTTCTATA TTTTTATTTT TGTTTCCCCT ATGTCCATAC TAGATAGACA TAATAAAGGA
AATTGAGGTA CTACCTATTA CCATTTGATT TTCACCCTTG TATTGCTTGC TGCTACACTC ATAGTTATAC CTTGTATCCC
TCATGTCTTA CAATGTTTAA CTTGCCTACG AATGCCATCT TTGATGTCCT AATACTTAAT CTGTCTTGCT GAATTTTCTG
TCTGGTTCTA TTTTTTTAGC ACGGTTATTT AATGAATATT GCATCTGTAA AATGGACCTC TGTCTAATCA TGTACAGGGT
GGACTCCTTC ATTTTGATGA TTGAATGAGA TAGGTGAATG TATCTGCTAA CCATTTGTAT TCTAGCGAAC TCTTAATTGT
TTTTGGGGGG AAAATGCCAA ATTTGCTTAA GCTTCTTCTT TGTCAAATTA TTGAGCTGTC TCACCC

>Vigan.10G065800.01
ATGGATTTGG GGGTTTCTGA TGAGATGTTA GGCACTTTTG TGCCTATAGT AGTTTACTGG ATTTATTCTG GGATTTACGT
TGTTTTGGGG TCGTTTGCTG AAAGTTATCG GTTACATTCG AAGCAGGAAG AGGACGAAAA AAATTTGGTG TCAAAGGGTG
CTGTGGTTAA AGGTGTTCTT CTTCAACAAC TAGTTCAGGC CGTGGTTGCA ACCCTCTTGT TTGCGCTGAC AGGAAGTGAT
AACCAAAATA CGACCAGCCA GAATACTTCT CTACTTGTTT TAGCAAGACA ATTTGTTACT GCTATGCTTG TAATGGACGC
ATGGCAATAC TTCATGCACA GATACATGCA TCACAACAAG TTCCTATACA AACATATCCA CTCTCTGCAT CACAGACTCA
TTGTACCCTA TTCATATGGA GCTCTATACA ATCACCCTGT GGAGGGGCTT CTGAATGACA CTGTTGGTGG TGCTTTATCG
TTCTTAGTCT CCGGGATGAG TCCTCGAGCC TCCATTTTCT TCTTCTCGTT TGCCACCATT AAAACTGTTG ATGATCACTG
TGGGTTATTG CTCCCCGGAA ACCTTTTCCA TATATTTTTC AAAAACAACT CGGCCTATCA TGATGTACAC CATCAACTCT
ATGGCAACAA GTACAACTTC TCACAGCCAT TCTTCATCAT GTGGGACAGA ATCTTGGGTA CCTACATGCC ATACACATTG
GAGGAGAGGG AAGGTGGTGG TTTTGAAACT AAACCTTGCA AAGATTACAA GGATGATTAA 

>Vigan.10G065800.01
MDLGVSDEML GTFVPIVVYW IYSGIYVVLG SFAESYRLHS KQEEDEKNLV SKGAVVKGVL LQQLVQAVVA TLLFALTGSD
NQNTTSQNTS LLVLARQFVT AMLVMDAWQY FMHRYMHHNK FLYKHIHSLH HRLIVPYSYG ALYNHPVEGL LNDTVGGALS
FLVSGMSPRA SIFFFSFATI KTVDDHCGLL LPGNLFHIFF KNNSAYHDVH HQLYGNKYNF SQPFFIMWDR ILGTYMPYTL
EEREGGGFET KPCKDYKDD*