GBrowse Details

Vigan.10G032500.01

Basic Information:
Name: Vigan.10G032500.01
Multiple alignment
Variant Information
Position: Chr10:3151795..3155807 (- strand)
Length: 4013
Functional Information:
Description: Similar to Uncharacterized protein. [I1KKL5, Glycine max]
GO: Biological Process: cellular metabolic process (GO:0044237)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: coenzyme binding (GO:0050662)
InterPro: NAD-dependent epimerase/dehydratase (IPR001509)
NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:23.87,13.19,10.71,10.82,5.96,5.93,1.43,10.11
Arabidopsis thaliana homolog: AT1G68540.1
Automatic updates:
Name: NM_001255209 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like (LOC100808002), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:3151795..3151896 (- strand)
Length: 102
Type: three_prime_UTR
Position: Chr10:3151897..3152038 (- strand)
Length: 142
Type: CDS
Position: Chr10:3152853..3153042 (- strand)
Length: 190
Type: CDS
Position: Chr10:3154402..3154564 (- strand)
Length: 163
Type: CDS
Position: Chr10:3154648..3154833 (- strand)
Length: 186
Type: CDS
Position: Chr10:3155085..3155257 (- strand)
Length: 173
Type: CDS
Position: Chr10:3155489..3155594 (- strand)
Length: 106
Type: CDS
Position: Chr10:3155595..3155807 (- strand)
Length: 213
Type: five_prime_UTR

>Vigan.10G032500.01 class=Sequence position=Chr10:3151795..3155807 (- strand)
ACCAAACAGA GGAGAATGCA TTTCACATGA CTATCCTGTT TCTACCAAGA ATGGGACACA CATCTCACGT GCCTCTCTTG
TGTTATCGAT TTTTGAGTTT TGTCTATTCT TTCGTAGTGA GTGGCGAGAG GTAAATAAGA GTCCTTTCCT TTATTAGACC
AATATACAAA GTGAGACTTT GAAACGAAGA ACCTGAAGAT AAAGTAGTTA GAAATGCCCG AGTTTTGCGT GACAGGAGGT
ACTGGCTTCA TCGCATCGCA CTTAATCAAG ACCTTATTAG AAAAGGGTCA TACGGTGACG ACCACCGTGA GAAACCCAGG
TATGCCATTA AATTTGTATA ATTTGTAGAA ATAAGTTTTT TTTAGTAATA TAAATTTGTA TTTCTTAGTT GAATATGTAA
TTTTTGTTTC AAGTAATTGG TTTATAGATG GAACTTTCTC CTTCGATTTC GATTTTCTAG TGATTTGTAT AACAGTTGAT
AATTTTTGTT AGTAATCCAC TTTCTGTCTC TTGCTACAGT TCTGAATTTA ATTATTTTTT TTTTTATCAG AGGATGAGGA
GAAGGTTGGT TTTCTGAGCG AACTCAGTGG AGCGAAAGAA AGACTGAAGA TTTTGAAAGC AGATCTCTTA GTAGAAAGAA
GCTTTGAGAA GGCAGTGACA GGAGTTGATG GTGTCTTTCA TACGGCTTCA CCTGTGCTTG TTCCATTCGA CGAAAACGTT
CAGGTATCTT TGCCTTTTTA ATATCTTGTT ATTTTGAAGA ATCTGACATA AAGTTGAATA TGCCTAAATT TAGTAGAACT
GACTTTGATA TAATGAACTA AATGATATTA TGGAAATGTG ATTTTAGCAT AACTAAACGA TGTGAACACA AATTGTTTGT
GAATAAGCCT TCTCTGTTTT GACGTAGGGT GAAGTTTGTT CTTTATTAGT AGCTTCTTAT ACTAAGATTT ATCATGATTT
GACTTATATC ACAGAAGAAT TTGATTGATC CATGCGTAAA AGGAACTTTG AACGTGCTTA ACTCCTGCTT AAAGGCAAAT
GTGAAACGTT TTGTGCTCAC TTCTTCTTGC TCTTCCATAA GATACCGTGA TGATGTGCAA CAACTCTGTC CTCTTAATGA
ATCTCATTGG ACAGACCTTG AGTACTGCAA ACGCTACAAC GTAATTGCAC TTTCTACCCA ATTTCACAAC TATTATATAT
TTGTGTAGTT GGCATTGTAT TAAAGTATTA GAAGTATGTG CAGTTATGGT ATGCATATGC AAAGACGGTG GCAGAAAGAG
AGGTTTGGAG AATAGCAAAA GAAAATGAAA TTGATGTAGT TGTGGTTAAC CCATCTTTCG TTGTTGGTCC ACTCCTTGCA
CCACAACCAA CAAGTACACT CCTCTTGATA CTTGCCATTG TCAAAGGTTA GTAGATCGCC ATCTTATGTT ACAGAAATTT
TTCATATTTG ACGTAAACTT TTTTTTTTTT TCAATCACTA ATTGTTGGTT TATAGATTTA AAAAACAGGC AATTACCATT
TTCATAAATT TCAATTATTC GATTATGATT ATCACGTTGA AAAACGGGTA ACTTTCATCT TGGTGAAAAC TTATCATCCA
TTCTTTTAAC AATTTCAATG ATTTGACAAT CTAACTTATG TATTTCGTGA TTAGTTATCT GCTCTTACAA ATTTCCTCCT
CTTCTATTCT CTCTTTCAAA TGGTAAGAGT GTAAAATTAT TTTGTAGGTT TGAAATTATT CTAATACACA AAAGTATTGA
GAGAAAAATG AGAAATAGAT GCATTATAAA CCCAAATATA ATATTATTTT ATTGATTTAA CATAAACTAG TTTGTAGAGA
TATTTTCATG TTGAAAAGAT TATTGATTAC TCTTACCTTT TAGGATAGAT TTGTTTTTTT TCATTTTTAT TTTTATTTTT
ATGTATAAAT GTTGATTAAG AAATTCCATT AATTAAAATG TTGATGTCAC AAAACACTAA CTGCTTAATT TATTTTTTAT
TATTTGAGTG CTCCTTGGGT TAACGTTTTT TTTAATAAAA ATGGGGACAA GGATAGATGT TTTAAACATA TAGGTCAATA
AGCAAATCTT ATAAAATTAT GATTGAGACC AGATGATTGC TAGATTGAAT AACTGCCTTA TATTTGAAAA TCTTCCTTAT
AGTGTCAAAT TCTTTTCTAT GAAACCTTCT TAGAGAAATA TATATTTTTT TCATAATTTA AAATTGACTT GTGAATAAAT
ATATAAAGAT TATCTCATAA CTTTTTACAA ATTTAGTTTC CAAATTATCC ATAAGTAAGT TTTAATTTAT AAAGAAGTTA
CAATTTCATT TTTTGTATTT GTTTATGCAG AAATCTTTAT AAAGAAAATT CATATTAGAT AATTTTTTTG ATAAATACTT
TTCGGTAAGA AACATTAAAA TAAAATATAT ATTTTTTGTA TAAACTGCAT AATTTAATAT GATTTGATTT AATTATGAAT
TTCCTTAAAT AATAAAGCTT AACACGTGTG TCTATAACCC AATTTTAGTG TCTATATAAC CCAATTTTAG TTTATATTTT
TTTTCTCTTG TGAAAATTTT AGGTAGAAAC TACCCAAATT GTATACTACA TACATAACTA AACATTAAGT AATGTCGTAT
GTGATGATTG AAAACAATAA TTTTAAATTT CTCCAATATA TCTTCTTCTA AAAATTTCTC AATCTACTTC TAAAAATTTG
CATGATTCAC TTCTTTACAG TTTTTATTTA TATATCTTTT AACAGGCATG AAAGGGGAAT ATCCTAATAC AACAGTGGGG
TTTGTCCACA TAAATGATGT TGTAGCTGCT CACTTGTTGG CTATGGAAGA TACCAATGCA TCTGGAAGGC TTATTTGTTC
AAGCACAGTA GCTCATTGGT CACAAATCAT TCAAATGCTT CGTTCCAAAT ATCCCTCCTA CCCATTTGAA AACAAGTGAG
TAATCATATT ATTAAGTTAA TTAATTAAAA CTAGATATAA ATTAGAATAA CTTCTATAAA TCTAATAGAT TATTAAATGG
ATAGTTCAAT CAATCATAAT ATTATCGGAC TAGCCTGTAC TATTATTTAT AAATGAATCG ATTGCGATAA TTTCAGAAAA
ATATAGTAGA AGATAATCTA ATTCAAACAA AAAATTTAGG GATAAAAAAA TAATAAAATC AACCATCATT TTTAGTATGT
TATATCTAAC AGATTGTAAG AGGTATAAAT TGTTATTTAT ATACCAATCA TAATTAGCTG TAAATAGAAA GATAATATAA
CTACGAATTA GGAAAATCTT AAACATTCAC TCTAATTTTT TTGTTTTTTT AGTTTATCAT AACCCTATAC AAGAGTTTAT
TTATATTATC TTAATTTAGT TTTGTAATTT GACAAAAACT TGTTATGGGC ATATGTGGAA ATGTAGTTAA GATTTGGCAT
AGTTATGGAA TAATAAGTAT ATAATAAGAT ATTTTTATTT TTGAGCATCA AGTATCTACC TGTGTGTTTT TCTAAAAACT
ATTTATTCAG ACCATGTTTA AATAAGAAAA AATATTTGCA CACGGAAATA AGCAAATCTA TTTTCAAATT ACAAGCCTGA
CTAAGAATTA AGAACATCAA TTGTGAATTT GAAGCACAAA AAGCAAGCTT ATTTTAAATT TAATACACTT TAGAAAGAAC
ATTTCACTAA TTTACTACAA ATTAAATGAT CTAAAAACAT TTTGCTACAA ATCACCTATG TTTTTCAAGG TCTGGTCTCA
TTGTTACAGG TGCAGCAGCC AGCAGGGAGA TGATAACCCA CACAGCATGG ACACCACCAA AATTACTCAG TTGGGGTTTC
CTCCATTCAT AACCCTAGAT AGGATGTTTG ATGATTGCAT TACAAGTTTT CAAGACAAGG GTTTTCTGTG ACATGTGACA
GTTGTTATGC TTCATGTTTC GTGTAGTGTA ACCGGAAACA AAATAAAGAA ATATGAACAA ATAAAATAGT TTATATATTA
TCTATTATTT CGC

>Vigan.10G032500.01
ACCAAACAGA GGAGAATGCA TTTCACATGA CTATCCTGTT TCTACCAAGA ATGGGACACA CATCTCACGT GCCTCTCTTG
TGTTATCGAT TTTTGAGTTT TGTCTATTCT TTCGTAGTGA GTGGCGAGAG GTAAATAAGA GTCCTTTCCT TTATTAGACC
AATATACAAA GTGAGACTTT GAAACGAAGA ACCTGAAGAT AAAGTAGTTA GAAATGCCCG AGTTTTGCGT GACAGGAGGT
ACTGGCTTCA TCGCATCGCA CTTAATCAAG ACCTTATTAG AAAAGGGTCA TACGGTGACG ACCACCGTGA GAAACCCAGA
GGATGAGGAG AAGGTTGGTT TTCTGAGCGA ACTCAGTGGA GCGAAAGAAA GACTGAAGAT TTTGAAAGCA GATCTCTTAG
TAGAAAGAAG CTTTGAGAAG GCAGTGACAG GAGTTGATGG TGTCTTTCAT ACGGCTTCAC CTGTGCTTGT TCCATTCGAC
GAAAACGTTC AGAAGAATTT GATTGATCCA TGCGTAAAAG GAACTTTGAA CGTGCTTAAC TCCTGCTTAA AGGCAAATGT
GAAACGTTTT GTGCTCACTT CTTCTTGCTC TTCCATAAGA TACCGTGATG ATGTGCAACA ACTCTGTCCT CTTAATGAAT
CTCATTGGAC AGACCTTGAG TACTGCAAAC GCTACAACTT ATGGTATGCA TATGCAAAGA CGGTGGCAGA AAGAGAGGTT
TGGAGAATAG CAAAAGAAAA TGAAATTGAT GTAGTTGTGG TTAACCCATC TTTCGTTGTT GGTCCACTCC TTGCACCACA
ACCAACAAGT ACACTCCTCT TGATACTTGC CATTGTCAAA GGCATGAAAG GGGAATATCC TAATACAACA GTGGGGTTTG
TCCACATAAA TGATGTTGTA GCTGCTCACT TGTTGGCTAT GGAAGATACC AATGCATCTG GAAGGCTTAT TTGTTCAAGC
ACAGTAGCTC ATTGGTCACA AATCATTCAA ATGCTTCGTT CCAAATATCC CTCCTACCCA TTTGAAAACA AGTGCAGCAG
CCAGCAGGGA GATGATAACC CACACAGCAT GGACACCACC AAAATTACTC AGTTGGGGTT TCCTCCATTC ATAACCCTAG
ATAGGATGTT TGATGATTGC ATTACAAGTT TTCAAGACAA GGGTTTTCTG TGACATGTGA CAGTTGTTAT GCTTCATGTT
TCGTGTAGTG TAACCGGAAA CAAAATAAAG AAATATGAAC AAATAAAATA GTTTATATAT TATCTATTAT TTCGC

>Vigan.10G032500.01
ATGCCCGAGT TTTGCGTGAC AGGAGGTACT GGCTTCATCG CATCGCACTT AATCAAGACC TTATTAGAAA AGGGTCATAC
GGTGACGACC ACCGTGAGAA ACCCAGAGGA TGAGGAGAAG GTTGGTTTTC TGAGCGAACT CAGTGGAGCG AAAGAAAGAC
TGAAGATTTT GAAAGCAGAT CTCTTAGTAG AAAGAAGCTT TGAGAAGGCA GTGACAGGAG TTGATGGTGT CTTTCATACG
GCTTCACCTG TGCTTGTTCC ATTCGACGAA AACGTTCAGA AGAATTTGAT TGATCCATGC GTAAAAGGAA CTTTGAACGT
GCTTAACTCC TGCTTAAAGG CAAATGTGAA ACGTTTTGTG CTCACTTCTT CTTGCTCTTC CATAAGATAC CGTGATGATG
TGCAACAACT CTGTCCTCTT AATGAATCTC ATTGGACAGA CCTTGAGTAC TGCAAACGCT ACAACTTATG GTATGCATAT
GCAAAGACGG TGGCAGAAAG AGAGGTTTGG AGAATAGCAA AAGAAAATGA AATTGATGTA GTTGTGGTTA ACCCATCTTT
CGTTGTTGGT CCACTCCTTG CACCACAACC AACAAGTACA CTCCTCTTGA TACTTGCCAT TGTCAAAGGC ATGAAAGGGG
AATATCCTAA TACAACAGTG GGGTTTGTCC ACATAAATGA TGTTGTAGCT GCTCACTTGT TGGCTATGGA AGATACCAAT
GCATCTGGAA GGCTTATTTG TTCAAGCACA GTAGCTCATT GGTCACAAAT CATTCAAATG CTTCGTTCCA AATATCCCTC
CTACCCATTT GAAAACAAGT GCAGCAGCCA GCAGGGAGAT GATAACCCAC ACAGCATGGA CACCACCAAA ATTACTCAGT
TGGGGTTTCC TCCATTCATA ACCCTAGATA GGATGTTTGA TGATTGCATT ACAAGTTTTC AAGACAAGGG TTTTCTGTGA

>Vigan.10G032500.01
MPEFCVTGGT GFIASHLIKT LLEKGHTVTT TVRNPEDEEK VGFLSELSGA KERLKILKAD LLVERSFEKA VTGVDGVFHT
ASPVLVPFDE NVQKNLIDPC VKGTLNVLNS CLKANVKRFV LTSSCSSIRY RDDVQQLCPL NESHWTDLEY CKRYNLWYAY
AKTVAEREVW RIAKENEIDV VVVNPSFVVG PLLAPQPTST LLLILAIVKG MKGEYPNTTV GFVHINDVVA AHLLAMEDTN
ASGRLICSST VAHWSQIIQM LRSKYPSYPF ENKCSSQQGD DNPHSMDTTK ITQLGFPPFI TLDRMFDDCI TSFQDKGFL*