GBrowse Details

Vigan.09G191400.01

Basic Information:
Name: Vigan.09G191400.01
Multiple alignment
Variant Information
Position: Chr09:33695587..33698139 (- strand)
Length: 2553
Functional Information:
Description: Similar to protein TIFY 11B-like. [XP_004510528.1, Cicer arietinum]
InterPro: Tify (IPR010399)
CO/COL/TOC1, conserved site (IPR018467)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:166.03,59.08,140.74,61.94,12.57,33.71,7.90,61.84
Automatic updates:
Name: KT031244 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max clone HN_CCL_200 ZIM transcription factor (Glyma07g04630.1) mRNA, partial cds.
PubMed ID: 26268547 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr09:33695587..33695971 (- strand)
Length: 385
Type: three_prime_UTR
Position: Chr09:33695972..33696080 (- strand)
Length: 109
Type: CDS
Position: Chr09:33696331..33696388 (- strand)
Length: 58
Type: CDS
Position: Chr09:33696486..33696733 (- strand)
Length: 248
Type: CDS
Position: Chr09:33697297..33697420 (- strand)
Length: 124
Type: CDS
Position: Chr09:33697668..33697830 (- strand)
Length: 163
Type: CDS
Position: Chr09:33697831..33698139 (- strand)
Length: 309
Type: five_prime_UTR

>Vigan.09G191400.01 class=Sequence position=Chr09:33695587..33698139 (- strand)
TTCAAACAAA AAATTTAAAA TTATCATGAC GATTATTATT ATTATTATAA ATCTGAATTT TGAAAATTAA AAAAAATAAT
TAGGAAGATA AAGACCACAT GGTCTCACCC TCTTTCTCAG ACCATAGCAG ATTCAAGGAA CATGCTTGGA AAACTGCCAA
CCCCGTCCAT ATTCCCCTTC TCAAACCTCT TCCTTTCGAC TACGAACTGA ACAAGGATCA TCCACCACCC AAAAGAGATC
ACCTTTACAA ACATTCGTCC ACTTTCACAG CTTTTCTTGT GAAAATTTCT TGTTGGGCAT CTCTTCAAAA TGTCAAGTTT
CCCCAACACA GTGTCGGAAG GCCGGAGGTT TGGCAAGGCG CCGGAAAAAT CCTCTTTTTC TCAGACTTGC AGTCTCTTGA
GCCAGTTCTT GAAGGAGAAA CGAGCTTCTG GTGATTCCAC CCTTGGAATG GGTGGGAAAA TGGAACCTAA AGGTATAATC
TTTCTTCCTC ACGGAATCCT GTTTTGTTAC TACTGTTCTT AGCCTGGGTC TGTAAGATTT TATCACCTGG TGTGTTTCCC
ATCCAATTTT TGTTGTGAGT AGCTTCTCTG TCACAATTGA TGGTTTGGTT TGGGAAAATA TTTAGCTTAA TTGCGTGGAA
ATAGGTAGAA AGTGTGTGAA ATTGCTTGTG ATGAGAATTG CTGATGGGGG TGTTGTTTGT TTGGATTTGG AAATTCCAGC
TAGTACGAAG GATTTGTTTG GCAGCCTGCA AAACTCAGAT GGGGCTTTGA AACTAAGCGC TTCTGCCATG GATTTTCTTC
CCCAGCTTGT GGAAAACCCC TGCATTAAGA AGCCTAATCT TAGGTGTGTG CTACAATTTT TGTTCTGTTC ATTTTTTTTC
GGAATTCTAA GCCATAAGGG ATGGATTGGG ATGAAAAAGT GGGTTTATTT TTGTTTTTAT TTTCTGGGAA ATAGTTTAGG
GAATGTTCAA AAATAAAAAA ATGACCCCAA CAGTTTGAGC CTTGTGAAAT TACCTGTATA CCCATGCTTC CACCAAGTAT
TCACACAGAA AATTGTAGGA GACACCATGC GCTTGGTTTG GTGATGCCTT TTATATCTTG AAGGGTATGC AAGAATAAAT
GAACCAATAT TTGTGAGGAT CTAAATCATC TCTAGGTGAT GACGATCTCT GTCATGCAGA ATATGTGCTT TTTATGAAAA
ACAAGTGTAT GCAGCTTGAA GTTTTTGGAC CATTAGCTTG TGACTAGAAT CATGCGGCTG AAAATTGAAG TCTTTATCCC
CAATTGTACT AGATCTGTTT AATTTATGGG CATGTGTGTG TTACATCATG ATTACTTCAT CACATCTGCT AAATTTGTTC
GGGTTCATGT ACTGATAAAG TTCCTATTAT GATTCTCGTA CTGTAGATCA GCGGTTCCTG AATCTCCTCA AATGACAATA
TTCTATGCTG GAAAAATGTT GGTATTCGAT GCTTTTCCTC CGGAGAAGGC AACAGAGGTG ATGGAGTTGG CCACCAAGCT
GGCGTTGGAC AGTTCCGGCG GCGAAGAAAC TCCCCCGAGT GCTCCGGTTA CCACCAAAGA ATTGGCTGAG ACCAAAGTGC
CTCAGACAAA CACCTCAGAA GCCCCTAAGC CAGGAAGCCA AGGGGTTGGT TCAGGTCAGT GTCCCCCATC TGTCATGTGA
ACAAAGGAAC CTCTAACGCA TGTTCAAAGT TCAGACACTA ATTCTAGCTA CAACTTATTT TGTCTAAACA GATATGAGGT
ATCCAAGAAG AGCTTCACTT CTAAAATTTC TTGAGAAAAG AAAAGAAAGG TAATTTAGCT GTTTTCTGTT TCCTACTTTT
AATCATTGAA AATGATGATC TGTGCCTTAT GATATTGGTT AAAGAAGTGA AAAAGTATGA AGTTTTGATT TCAAAACCAA
AAGAACTTAT TTTGGAAGGT GATTACTTGA AAATTAGTAT AAAACTGGTG AATTCTGGGT ATGGCCCTTT ATTCATTTGG
GTAATTTTTT TTGAAGGTTT TTGTGTTAAT AATAATGATT GAATGTTGAA ACTTTGTAGG GTTAATGCGA GAGGGCCTTA
TCAAGTGAAC AATCAGAAAC CAGAGGGAAA CAGTTCAGGT GGTGATCCTG AAGATCAGTC TTCTAAACAG TTTGACCTTA
ACTTGTAGAT GTTTACTTCA TCACGAACTT AGGATATACA GGCTCTGGTC AACCAAAAGC ACCTAACTAC ATCAAAGATT
GCTGAGGCCT TCATACGAAT TTATCATATA ATATTATATA TATTTGTATG TATTATTATT ATTATATTAT TTAATCACCT
AGGTCCTCTT CTGTGGACCA AACCAGAGAT AAATTTTAGA TTGATTAGCT TAAGAATGTT TAAAGTTACT ACTGAATGCA
TGATTTTGAT AACTTTCGAT GATTACAAAG TCGTTTCTAC ACCTGACCCT GTCTGCATAA TTTCATGTGT GGTTGTATCC
TACGGGTAAA AATCTTGATT TTTTCATTCC GTCTCTATTT TTTAATTTAT TTAAAAGATT ATTATTATCA TAA

>Vigan.09G191400.01
TTCAAACAAA AAATTTAAAA TTATCATGAC GATTATTATT ATTATTATAA ATCTGAATTT TGAAAATTAA AAAAAATAAT
TAGGAAGATA AAGACCACAT GGTCTCACCC TCTTTCTCAG ACCATAGCAG ATTCAAGGAA CATGCTTGGA AAACTGCCAA
CCCCGTCCAT ATTCCCCTTC TCAAACCTCT TCCTTTCGAC TACGAACTGA ACAAGGATCA TCCACCACCC AAAAGAGATC
ACCTTTACAA ACATTCGTCC ACTTTCACAG CTTTTCTTGT GAAAATTTCT TGTTGGGCAT CTCTTCAAAA TGTCAAGTTT
CCCCAACACA GTGTCGGAAG GCCGGAGGTT TGGCAAGGCG CCGGAAAAAT CCTCTTTTTC TCAGACTTGC AGTCTCTTGA
GCCAGTTCTT GAAGGAGAAA CGAGCTTCTG GTGATTCCAC CCTTGGAATG GGTGGGAAAA TGGAACCTAA AGCTAGTACG
AAGGATTTGT TTGGCAGCCT GCAAAACTCA GATGGGGCTT TGAAACTAAG CGCTTCTGCC ATGGATTTTC TTCCCCAGCT
TGTGGAAAAC CCCTGCATTA AGAAGCCTAA TCTTAGATCA GCGGTTCCTG AATCTCCTCA AATGACAATA TTCTATGCTG
GAAAAATGTT GGTATTCGAT GCTTTTCCTC CGGAGAAGGC AACAGAGGTG ATGGAGTTGG CCACCAAGCT GGCGTTGGAC
AGTTCCGGCG GCGAAGAAAC TCCCCCGAGT GCTCCGGTTA CCACCAAAGA ATTGGCTGAG ACCAAAGTGC CTCAGACAAA
CACCTCAGAA GCCCCTAAGC CAGGAAGCCA AGGGGTTGGT TCAGATATGA GGTATCCAAG AAGAGCTTCA CTTCTAAAAT
TTCTTGAGAA AAGAAAAGAA AGGGTTAATG CGAGAGGGCC TTATCAAGTG AACAATCAGA AACCAGAGGG AAACAGTTCA
GGTGGTGATC CTGAAGATCA GTCTTCTAAA CAGTTTGACC TTAACTTGTA GATGTTTACT TCATCACGAA CTTAGGATAT
ACAGGCTCTG GTCAACCAAA AGCACCTAAC TACATCAAAG ATTGCTGAGG CCTTCATACG AATTTATCAT ATAATATTAT
ATATATTTGT ATGTATTATT ATTATTATAT TATTTAATCA CCTAGGTCCT CTTCTGTGGA CCAAACCAGA GATAAATTTT
AGATTGATTA GCTTAAGAAT GTTTAAAGTT ACTACTGAAT GCATGATTTT GATAACTTTC GATGATTACA AAGTCGTTTC
TACACCTGAC CCTGTCTGCA TAATTTCATG TGTGGTTGTA TCCTACGGGT AAAAATCTTG ATTTTTTCAT TCCGTCTCTA
TTTTTTAATT TATTTAAAAG ATTATTATTA TCATAA

>Vigan.09G191400.01
ATGTCAAGTT TCCCCAACAC AGTGTCGGAA GGCCGGAGGT TTGGCAAGGC GCCGGAAAAA TCCTCTTTTT CTCAGACTTG
CAGTCTCTTG AGCCAGTTCT TGAAGGAGAA ACGAGCTTCT GGTGATTCCA CCCTTGGAAT GGGTGGGAAA ATGGAACCTA
AAGCTAGTAC GAAGGATTTG TTTGGCAGCC TGCAAAACTC AGATGGGGCT TTGAAACTAA GCGCTTCTGC CATGGATTTT
CTTCCCCAGC TTGTGGAAAA CCCCTGCATT AAGAAGCCTA ATCTTAGATC AGCGGTTCCT GAATCTCCTC AAATGACAAT
ATTCTATGCT GGAAAAATGT TGGTATTCGA TGCTTTTCCT CCGGAGAAGG CAACAGAGGT GATGGAGTTG GCCACCAAGC
TGGCGTTGGA CAGTTCCGGC GGCGAAGAAA CTCCCCCGAG TGCTCCGGTT ACCACCAAAG AATTGGCTGA GACCAAAGTG
CCTCAGACAA ACACCTCAGA AGCCCCTAAG CCAGGAAGCC AAGGGGTTGG TTCAGATATG AGGTATCCAA GAAGAGCTTC
ACTTCTAAAA TTTCTTGAGA AAAGAAAAGA AAGGGTTAAT GCGAGAGGGC CTTATCAAGT GAACAATCAG AAACCAGAGG
GAAACAGTTC AGGTGGTGAT CCTGAAGATC AGTCTTCTAA ACAGTTTGAC CTTAACTTGT AG

>Vigan.09G191400.01
MSSFPNTVSE GRRFGKAPEK SSFSQTCSLL SQFLKEKRAS GDSTLGMGGK MEPKASTKDL FGSLQNSDGA LKLSASAMDF
LPQLVENPCI KKPNLRSAVP ESPQMTIFYA GKMLVFDAFP PEKATEVMEL ATKLALDSSG GEETPPSAPV TTKELAETKV
PQTNTSEAPK PGSQGVGSDM RYPRRASLLK FLEKRKERVN ARGPYQVNNQ KPEGNSSGGD PEDQSSKQFD LNL*