GBrowse Details

Vigan.09G159300.01

Basic Information:
Name: Vigan.09G159300.01
Multiple alignment
Variant Information
Position: Chr09:29908977..29912391 (- strand)
Length: 3415
Functional Information:
Description: Similar to Uncharacterized protein. [I1MKS0, Glycine max]
GO: Biological Process: biosynthetic process (GO:0009058)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: pyridoxal phosphate binding (GO:0030170)
InterPro: Aminotransferases, class-I, pyridoxal-phosphate-binding site (IPR004838)
Aminotransferase, class I/classII (IPR004839)
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (IPR015421)
Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (IPR015422)
Pyridoxal phosphate-dependent transferase (IPR015424)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.43,0.00,0.00,0.09,0.00,0.29
Arabidopsis thaliana homolog: AT1G01480.1, AT3G61510.1, AT4G11280.1
Automatic updates:
Name: BT091354 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-25A10 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:29908977..29909183 (- strand)
Length: 207
Type: three_prime_UTR
Position: Chr09:29909184..29910159 (- strand)
Length: 976
Type: CDS
Position: Chr09:29911590..29911750 (- strand)
Length: 161
Type: CDS
Position: Chr09:29911895..29912026 (- strand)
Length: 132
Type: CDS
Position: Chr09:29912136..29912303 (- strand)
Length: 168
Type: CDS
Position: Chr09:29912304..29912391 (- strand)
Length: 88
Type: five_prime_UTR

>Vigan.09G159300.01 class=Sequence position=Chr09:29908977..29912391 (- strand)
CCTAGCTATA GCACCATCCA AATTCCAAAG CCTTGCAGCT CAAACTAGAT TCTTACCATA CACCTTCTGC ATAAATTATA
ACATTAACAT GGACTCAGGG AGAATGAGCC AACAACTTCT ATCCAAAATT GCCACCAATG ACAAACATGG AGAGAATTCT
CCATACTTTG ATGGCTGGAA AGCATATGAG AGAAACCCTT TTCACCCTAC AAAAAATCCT CAAGGTGTTA TTCAGATGGG
TCTTGCAGAA AATCAAGTAT GTGTGATTCT CCCTAGACCC ACCATAAAAA ATGCAATTTT TTATTTTGAT TACGATCAGT
TTACTAAATG GGTGTTCGTT TTCTTGCTGG TTTTCTCTTT TCCAGCTGTG CTTTGATCTG ATTGAAGACT GGATTCTGAA
TCATCCCGAA GCTTCCATTT GCACTCCTGA GGGAGTGCAT CAGTTCAGAA ACATTGCCAA CTTTCAGGAC TATCATGGAC
TGCAACAGTT CAGAAATGTA AGTCAAGGAA ATTAATTATG AATTAATCTT TTCTCACGTA AAGTTTCTTT TCATTAGTTT
CTATCACAGC CTACAAGTAG AAACAACTAT TAATATGCTG AAAACTCAGA AGAAAATGCA TTTTTTATTC TGATTTTGCA
GGCTATTGCA AACTGGATGT CAAAAGTGAG AGGAGGTAGG GTCAGATTTG ATCCAGACCG TATATTGATG AGTGGAGGAG
CAACAGGGGC CAACGAGCAA ATCATGTTCT GCTTGGCTGA TCCTGGAGAT GCCTTTATGA TTCCTACCCC ATTTTATCCA
GGGTATGTAC CTTCTCTTCC TTAAAATCTG TGTTCATTCA ATGAATGTCT CTGTGCTATT CACTATCACC TTTTAAAGTG
AAAAAGGAAA ACCGAACCTT CATAAAGCCT TATAATAATA ATATAACACC TCTTCTTTTT TATTCAAGGC GAAATTCAAT
GTCTTAACAT TCTACTTACT TTAGTTACAA CAGCTTTTCT CAATATATAA TATTCATCAG AGTTTTATTT TTGTTTCTGA
GGTGACCCTT TTATGTATAT CTGCTTACTT GTTTCAGTCT GGAATACTGT AGAATTAGCC TAATATTTTG ACAGATTACG
TTAAGTGTAT ATGAAAACGT GGTATTCAAG GGTTTTTGTT GCGGACACCA AATAAGGTGA AGCTTGGGTT GGATCAATCA
AAGTAATGTA TCACTAATGG ATGAAATAAT TGAGTCAGTT TTATTTTTAT AAGCAAAATA AACTTTATAA AAGATGTGAA
GAACAACACA AAGAAGGACA TGATCTTAAT TTTGTTATGA TATTAATTAA GGTTTTTCTT TAAATGAGTT TAGTACAAGT
AATTAAGGTT TTTATCTTTT CATTACGAAA TATATATCCT CTTATAGTAT GACTTTCTCT TCTGGTCTTT GTTGCATATT
GTGATAATTT GGAAAAAGAA AATCAGAGAA ATTATGTTCA AACTATTAAG CGTGCCATGG TGTGAGGTTA GTCAACACGC
GTGTGGTTTT TCGTTCACAT ATATGTTAAG TTCAAATTAG ACACTTCATG ATGCAAGCTA AGTGGATTAT AACTATACAT
TGACCTTTAC AAGATGAAAC ATGGAAAACT ACTGACATCT GCGTACGGTG ACCTCATATT CAAACAGAAA CGTCAGCACA
ATACAATAAT TTCACACACA TGCAGCTCAA TTAATTTTTC AGAAATTTAA TTCGGTCGGT CAAATTTCTT CACAATATCA
AATTTAGTCT AAAGAAAATC ATGCCATGTC ATTATTTGAT TTTTTATTTT CATGGAATTT CTTTTGCACT AAATCCAACT
CTTTTCTTTA ACTGATTTCT GCATTGATAT GTTTAACCTT TGCAATTAAT TTGCTTTAAA GATTGTGCTT TTTTTTATTG
AAAGCAATAT TTGAAATTTT TTTCAAGACC CTTGTAACTC TTTCCAGCAA CCCACTTAAT GCGTGGACCA CAATACATAA
ATATATTCAC CATGGCTGAA TTGGTCAAAA GAGAATTTAA CCTGATAGGG GGATTAGACG CGTATTATTA TATTAAGGTG
ATATGATTAA GAGGTGGAAA AATTAATTAA CAACGTCTTA TCAATGGCAA AATATGATTA CGTAAGTGTA TACCTACACA
ACACAAAAAT GACATATATG GTTTTATTTA ACAGAGTGAT AAAGATTGAT AGATTTTCAT ATGTTACTAC AGATTCGTTC
GTGACTTGTG TTGGAGAACC CAGGTGCAGT TGATTCCTGT CCACTGCCAT AGCTCCAACG ACTTCAAGAT AACAAGAGAA
GCTCTTGAAG AAGCTTACAA AAAAGCCAAA GAGGACAACA TCAACGTTAA GGGGTTGATC ATAACAAACC CCTCTAACCC
TTTGGGCACA ACCTTGGACA GGGACACGTT GAAGAGCCTA GTGAGCTTCA TCAACGAGAA AAACATTCAC TTGGTCTGTG
ATGAAATCTA CGCAGCAACT GTGTTCAGTA GTTCCCCCAG TTATGTAAGC GTGGCTGAAG TGATTCAAGA AATGGAACAT
TGCAAACGCG AACTGATTCA TGTCATTTAT AGTTTGTCCA AAGACATGGG GTTCCCTGGT TTCAGAGTTG GCATAGTTTA
TTCATTCAAC GATGAAGTGG TGGCATGTGC TAGGAAAATG TCTAGCTTCG GCTTAGTCTC CTCGCAAACT CAACACATGC
TGGCTTCCAT GCTTTCCGAT GAAAAGTTTG TGACGAAGTT TCTTTCAGAG AATTCAAGAA GGTTGGAGGA GAGGCACGAG
AAGTTCATGA AGGGGCTTGA AGAGGTTAAC ATTGTTCGGT TTCCAAGCAG CGCAGGACTT TTCTTCTGGA TGAACTTGAA
GAGTTTATTG GAGGAAGCAA CGTTTGAAGC TGAGCTGAAG CTATGGCGTG TGATCATTCA CGAGGTGAAG CTGAATGTGT
CACCAGGGTC TTCTTTCAAC TGTTCTGAGC CTGGTTGGTT TAGGGTTTGC TTTGCCAACA TGGATGATGA AACAGTGGAG
ATTGCACTGA ACAGGATTCG TGAACTGGTG GGGAAAGAAA CAAAGAAACC AGTGGGAATG AAACGTTGGC AACCGAATCT
TAGACTCAGT TTTTCTTCGA GGCGGTTTGA TGAGAGTGCT ATGTCTCCTC ATTCACCTAT TACATCACCT CTTGTTCAAG
CCACTTGAAT ATTCAACAAG GGTTCTGCAT CAACATCTAT CGTTTTCAAG AACTTTGATG ATACGGTCTC AGTCTGAAAA
TATTTTAATA ATTTTGTTTT TTTGTTTTGC TAATTAGGTT TGCTTTCCTA ATGTTCTGGA GGGTGCTTAG GGTATTTTCA
CGTTTAGGTT GTCCCAAAGG GCTAACTGTG AGATAGCTAG GGTGACTGAA ATTAT

>Vigan.09G159300.01
CCTAGCTATA GCACCATCCA AATTCCAAAG CCTTGCAGCT CAAACTAGAT TCTTACCATA CACCTTCTGC ATAAATTATA
ACATTAACAT GGACTCAGGG AGAATGAGCC AACAACTTCT ATCCAAAATT GCCACCAATG ACAAACATGG AGAGAATTCT
CCATACTTTG ATGGCTGGAA AGCATATGAG AGAAACCCTT TTCACCCTAC AAAAAATCCT CAAGGTGTTA TTCAGATGGG
TCTTGCAGAA AATCAACTGT GCTTTGATCT GATTGAAGAC TGGATTCTGA ATCATCCCGA AGCTTCCATT TGCACTCCTG
AGGGAGTGCA TCAGTTCAGA AACATTGCCA ACTTTCAGGA CTATCATGGA CTGCAACAGT TCAGAAATGC TATTGCAAAC
TGGATGTCAA AAGTGAGAGG AGGTAGGGTC AGATTTGATC CAGACCGTAT ATTGATGAGT GGAGGAGCAA CAGGGGCCAA
CGAGCAAATC ATGTTCTGCT TGGCTGATCC TGGAGATGCC TTTATGATTC CTACCCCATT TTATCCAGGA TTCGTTCGTG
ACTTGTGTTG GAGAACCCAG GTGCAGTTGA TTCCTGTCCA CTGCCATAGC TCCAACGACT TCAAGATAAC AAGAGAAGCT
CTTGAAGAAG CTTACAAAAA AGCCAAAGAG GACAACATCA ACGTTAAGGG GTTGATCATA ACAAACCCCT CTAACCCTTT
GGGCACAACC TTGGACAGGG ACACGTTGAA GAGCCTAGTG AGCTTCATCA ACGAGAAAAA CATTCACTTG GTCTGTGATG
AAATCTACGC AGCAACTGTG TTCAGTAGTT CCCCCAGTTA TGTAAGCGTG GCTGAAGTGA TTCAAGAAAT GGAACATTGC
AAACGCGAAC TGATTCATGT CATTTATAGT TTGTCCAAAG ACATGGGGTT CCCTGGTTTC AGAGTTGGCA TAGTTTATTC
ATTCAACGAT GAAGTGGTGG CATGTGCTAG GAAAATGTCT AGCTTCGGCT TAGTCTCCTC GCAAACTCAA CACATGCTGG
CTTCCATGCT TTCCGATGAA AAGTTTGTGA CGAAGTTTCT TTCAGAGAAT TCAAGAAGGT TGGAGGAGAG GCACGAGAAG
TTCATGAAGG GGCTTGAAGA GGTTAACATT GTTCGGTTTC CAAGCAGCGC AGGACTTTTC TTCTGGATGA ACTTGAAGAG
TTTATTGGAG GAAGCAACGT TTGAAGCTGA GCTGAAGCTA TGGCGTGTGA TCATTCACGA GGTGAAGCTG AATGTGTCAC
CAGGGTCTTC TTTCAACTGT TCTGAGCCTG GTTGGTTTAG GGTTTGCTTT GCCAACATGG ATGATGAAAC AGTGGAGATT
GCACTGAACA GGATTCGTGA ACTGGTGGGG AAAGAAACAA AGAAACCAGT GGGAATGAAA CGTTGGCAAC CGAATCTTAG
ACTCAGTTTT TCTTCGAGGC GGTTTGATGA GAGTGCTATG TCTCCTCATT CACCTATTAC ATCACCTCTT GTTCAAGCCA
CTTGAATATT CAACAAGGGT TCTGCATCAA CATCTATCGT TTTCAAGAAC TTTGATGATA CGGTCTCAGT CTGAAAATAT
TTTAATAATT TTGTTTTTTT GTTTTGCTAA TTAGGTTTGC TTTCCTAATG TTCTGGAGGG TGCTTAGGGT ATTTTCACGT
TTAGGTTGTC CCAAAGGGCT AACTGTGAGA TAGCTAGGGT GACTGAAATT AT

>Vigan.09G159300.01
ATGGACTCAG GGAGAATGAG CCAACAACTT CTATCCAAAA TTGCCACCAA TGACAAACAT GGAGAGAATT CTCCATACTT
TGATGGCTGG AAAGCATATG AGAGAAACCC TTTTCACCCT ACAAAAAATC CTCAAGGTGT TATTCAGATG GGTCTTGCAG
AAAATCAACT GTGCTTTGAT CTGATTGAAG ACTGGATTCT GAATCATCCC GAAGCTTCCA TTTGCACTCC TGAGGGAGTG
CATCAGTTCA GAAACATTGC CAACTTTCAG GACTATCATG GACTGCAACA GTTCAGAAAT GCTATTGCAA ACTGGATGTC
AAAAGTGAGA GGAGGTAGGG TCAGATTTGA TCCAGACCGT ATATTGATGA GTGGAGGAGC AACAGGGGCC AACGAGCAAA
TCATGTTCTG CTTGGCTGAT CCTGGAGATG CCTTTATGAT TCCTACCCCA TTTTATCCAG GATTCGTTCG TGACTTGTGT
TGGAGAACCC AGGTGCAGTT GATTCCTGTC CACTGCCATA GCTCCAACGA CTTCAAGATA ACAAGAGAAG CTCTTGAAGA
AGCTTACAAA AAAGCCAAAG AGGACAACAT CAACGTTAAG GGGTTGATCA TAACAAACCC CTCTAACCCT TTGGGCACAA
CCTTGGACAG GGACACGTTG AAGAGCCTAG TGAGCTTCAT CAACGAGAAA AACATTCACT TGGTCTGTGA TGAAATCTAC
GCAGCAACTG TGTTCAGTAG TTCCCCCAGT TATGTAAGCG TGGCTGAAGT GATTCAAGAA ATGGAACATT GCAAACGCGA
ACTGATTCAT GTCATTTATA GTTTGTCCAA AGACATGGGG TTCCCTGGTT TCAGAGTTGG CATAGTTTAT TCATTCAACG
ATGAAGTGGT GGCATGTGCT AGGAAAATGT CTAGCTTCGG CTTAGTCTCC TCGCAAACTC AACACATGCT GGCTTCCATG
CTTTCCGATG AAAAGTTTGT GACGAAGTTT CTTTCAGAGA ATTCAAGAAG GTTGGAGGAG AGGCACGAGA AGTTCATGAA
GGGGCTTGAA GAGGTTAACA TTGTTCGGTT TCCAAGCAGC GCAGGACTTT TCTTCTGGAT GAACTTGAAG AGTTTATTGG
AGGAAGCAAC GTTTGAAGCT GAGCTGAAGC TATGGCGTGT GATCATTCAC GAGGTGAAGC TGAATGTGTC ACCAGGGTCT
TCTTTCAACT GTTCTGAGCC TGGTTGGTTT AGGGTTTGCT TTGCCAACAT GGATGATGAA ACAGTGGAGA TTGCACTGAA
CAGGATTCGT GAACTGGTGG GGAAAGAAAC AAAGAAACCA GTGGGAATGA AACGTTGGCA ACCGAATCTT AGACTCAGTT
TTTCTTCGAG GCGGTTTGAT GAGAGTGCTA TGTCTCCTCA TTCACCTATT ACATCACCTC TTGTTCAAGC CACTTGA

>Vigan.09G159300.01
MDSGRMSQQL LSKIATNDKH GENSPYFDGW KAYERNPFHP TKNPQGVIQM GLAENQLCFD LIEDWILNHP EASICTPEGV
HQFRNIANFQ DYHGLQQFRN AIANWMSKVR GGRVRFDPDR ILMSGGATGA NEQIMFCLAD PGDAFMIPTP FYPGFVRDLC
WRTQVQLIPV HCHSSNDFKI TREALEEAYK KAKEDNINVK GLIITNPSNP LGTTLDRDTL KSLVSFINEK NIHLVCDEIY
AATVFSSSPS YVSVAEVIQE MEHCKRELIH VIYSLSKDMG FPGFRVGIVY SFNDEVVACA RKMSSFGLVS SQTQHMLASM
LSDEKFVTKF LSENSRRLEE RHEKFMKGLE EVNIVRFPSS AGLFFWMNLK SLLEEATFEA ELKLWRVIIH EVKLNVSPGS
SFNCSEPGWF RVCFANMDDE TVEIALNRIR ELVGKETKKP VGMKRWQPNL RLSFSSRRFD ESAMSPHSPI TSPLVQAT*