GBrowse Details

Vigan.08G322700.01

Basic Information:
Name: Vigan.08G322700.01
Multiple alignment
Variant Information
Position: Chr08:41586061..41591050 (+ strand)
Length: 4990
Functional Information:
Description: Similar to L-galactono-1,4-lactone dehydrogenase, mitochondrial-like. [XP_003535902.1, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Cellular Component: membrane (GO:0016020)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: D-arabinono-1,4-lactone oxidase activity (GO:0003885)
Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614)
Molecular Function: galactonolactone dehydrogenase activity (GO:0016633)
Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor (GO:0016899)
Molecular Function: flavin adenine dinucleotide binding (GO:0050660)
InterPro: FAD linked oxidase, N-terminal (IPR006094)
D-arabinono-1,4-lactone oxidase (IPR007173)
Galactonolactone dehydrogenase (IPR010029)
FAD-binding, type 2 (IPR016166)
FAD-binding, type 2, subdomain 1 (IPR016167)
CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (IPR016169)
L-gulonolactone/D-arabinono-1,4-lactone oxidase (IPR023595)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:32.60,33.25,10.25,13.49,12.21,16.08,17.03,12.38
Arabidopsis thaliana homolog: AT3G47930.1
Structure :
Position: Chr08:41586061..41586137 (+ strand)
Length: 77
Type: five_prime_UTR
Position: Chr08:41586138..41586737 (+ strand)
Length: 600
Type: CDS
Position: Chr08:41587397..41587647 (+ strand)
Length: 251
Type: CDS
Position: Chr08:41588134..41588319 (+ strand)
Length: 186
Type: CDS
Position: Chr08:41588845..41589259 (+ strand)
Length: 415
Type: CDS
Position: Chr08:41590061..41590201 (+ strand)
Length: 141
Type: CDS
Position: Chr08:41590369..41590527 (+ strand)
Length: 159
Type: CDS
Position: Chr08:41590528..41591050 (+ strand)
Length: 523
Type: three_prime_UTR

>Vigan.08G322700.01 class=Sequence position=Chr08:41586061..41591050 (+ strand)
TTTAGTAGAA TTTTAAAATG GATAATTAAC TCAAATTCCA TCACTTCTCT GTTTGCTCAT CATAGTTGAG CGCAGACATG
CTGAGAACAC TAGTTCTGAA GCGCACCGTC GCTCTCACTC GCCAACATTC GCACTCCGTG CTCTTCCGCC GATTTTCGGC
GGCGCCGGAA CCCGCCTCCT CCGCCGATGC AGAAACCCGC AAGTACGCGG GCTACGCGGC GCTGCTCCTC TTCTGCGGTG
CCGCCACCTA TTACAGCTTC CCCCTGCCGG ACGATGCCAA GCACAAGAAG GCGCAGATCT TCCGGTACGC GCCGTTGCCG
GAGGACCTGC ACACGGTGTC GAACTGGAGC GGGACGCACG AGGTGCACAC TCGCAACTTC TTCCAGCCGG AGAACGTGGA
ACAGCTGGAG CGCGTGGTGA GGGAGGCGAA CGAGAAGAGA GCCCGAATCC GTCCGGTCGG GTCGGGGCTG TCGCCGAACG
GGATTGGGCT TTCGAGGGTC GGAATGGTGA ACTTGGCGCT GATGGATGGG ATATTGGAAG TGGACAAGCA GAGTAAGACT
GTGAGGGTGC AGGCCGGGAT CAGAGTGCAG CAGCTTGTGG ATGGACTCAA GGACCACGGT CTTACCTTGC AGAATTTTGC
TTCCATTAGG GAGCAACAAA TTGGTGGCAT CATTCAGGTT CTTCTTTTAT TATGTTTAGC CACACTTCGG AGATCGGCTC
TGACCAGTGA TATGACCAAA TTAGGAATAT AAACTCAAAT TGACTTATGC TTGAATTCAA ATTGTAAGAC AGTATCATAG
ATAGGTTGTT GTTGGGCCTA TCAAAGCAAT TGCTATCATT AGCTTAATGA TGAAGTTCTG ACATCAACGT AATATGATTA
AATTAAATAC ATGTGTTAGA TCATTTTTAT CTTACAATTA GTTTTAGAAA GTTGAGTTAG GACGAAAGTC AAATTGTGAG
ATGGTATCAG AAATTTATCC TATAAATTTC AGACTCATAT ATAAAATGTT GGCAGTGAGG TGTATTAGAA ACATCGATGC
AGTAGTTTTA TGGACAAATT AAAATACATA AATAGGAATA ATCTTCACTT TATATGCCAA TTTTGTTGAA GTGATTTAGA
TGCAAAACCA TATTCCAAGA CAACCAATAT CAGATTTTCC TAAGAAAAAT TATATGTGAT TCTTAGGTAT TTATCGTGCC
ATGTATTATG CAAGAAGTGA TTAAAATGGG TATCAGAGTT TTCTGCCTGG TTGAATTTTT CTGTTTGGGG TCGTTTAATA
CTTGACCACC TTGTCATCTT TCATATAAAG TAAAAGGCTT TGCATTCATG TTCTAGGTTG GTGCACATGG CACCGGTGCA
AAGTTGCCTC CTATTGATGA ACAAGTGATT GCCATGAAAT TGGTCACCCC TGCCAAAGGG ACTATAGAAA TATCGAAAGA
TAAAGATCCT GAGCTGTTTT ATCTTGCTCG ATGTGGTCTT GGAGGACTTG GAGTTGTGGC TGAAGTCACC CTTCAATGTG
TTGATCGACA GGAGCTTGTG GAGCACACAT TTGTCTCAAC CATGAAGGAG ATAAAGAGAA ATCACAAGTA ATTATTTTTG
GTGTTTATTT ATTTTTTTCA TTTGGTGCAT CAATCAAATA ACAGATATGT TGAATTTTAT CATTACCACG TTTGTTACAC
TATCTTTCTG TAACATGGAA CTAAGATCTA AAAGTTACTT TACTCCCCAA CAACTATAAT AAAAATGACA ATGAGAGAAA
ATCCCTCCTT GGTTTGTCCT CCATATATTA CAGTGTCATC ATATTAATTC TTTAAAGATT TTTGTCACTA AATTTGTCCC
AGAAAAATTT AGAATGCTGC ACATAGTGGT GATATAAAAG GACAGATTTA TAACTATTTG CAATCTTTGA AGGACTAATT
TAGTTGCAAA AAAATCTCAG AATTATTGAT GTGATGAAAG CTAATTTTGG ATGACCAATG TAATATTTAT ATTAATAAGA
ATAAAAGAGT GACTCGGTAT TAAGGATCTG CCTCCAAAGA TTTTGATTGT TAGCCCTTTT CTATCTTATG CAGGAAATTG
TTGTCTGACA ATAAGCATGT GAAGTACCTT TATATCCCTT ACACCGACAC TGTTGTGGTT GTGCGGTGCA ATCCTGTTTC
AAAGTGGAAA GGTCCTCCCA AGTTTAAACC ACAGTATACT AAAGATGAAG CCATACAGCA TGTGCGTGAC CTTTACAGGG
AGTCCCTCCA GAAATATGGG TACAATTACA CCTTCACTGT TGATTGTAAG ATTAATCAAT TTATTTTGGT TTGTTAGATG
TACTGGAGTA GCCATTGAAA GAAAGTGTTG CTGAGTCTTT TTCACCTAAT AAAAGCCACT AGATGCTGTT ACGTGTCATT
TCTTATTTTT GTGTCTTGAA TATGATTTAA ATTTACATTC AGAGGTAGAA ATAGAAGATT GAAGGAATTA CTAAAGATTT
AGAACTGTTT CCATTTTGTA GGCCTGTGAA TTTCCAACTA ATTCGTGTAG TTTAGTAAGG CACGGACTGA TAAATGTTAA
TGTATTTTGC ATATTGATCT GAGGTGTTGA AAAAGTGCTG TGATCTCATT GATATTCCTG TGATTTTGCT ATATTTTTAA
TCACTTTTTA TATTAGTAGC TTGCTGCCAA ACACTTCCGT TTTCATTTTA TATTTCCCTT GTGAAATGTG CCATTCTTTA
ATTGGTGCCA TACTATGAAC TTTTCTATTT CAAGATGTGC ATAAGTTTTT GTTATTTTAT ACAGAAGAGG AGGATCTAGG
GGTGAATCAG CAGAAGAACA AAAAATAGAT GAACTTTCTT TCACAGAATT AAGAGATAAA CTAATTGCCC TGGATCCTCT
CAATAAAAAG CACATCATCA GCATTAATCA AGCTGAGGCC GAGTTCTGGC GGAAGTCAGA AGGTTACAGG GTTGGATGGA
GTGATGAAAT ATTGGGCTTT GATTGTGGAG GCCAACAGTG GGTATCGGAG ACATGTTTCC CAGCTGGAAA ACTAGCTAAT
CCAAGCATGA AAGACCTTGA ATACATTGAA GAGCTGAAGC AACTTATAGA GAATGAAGAG ATACCTGCAC CTGCTCCAAT
TGAGCAACGT TGGACAGCGA GCAGTAGGAG TCCCTTGAGT CCTGCTTCAA GCCCATCTGA GGATGATATA TTTTCTTGGG
TAATAAAACT CTTTCCTGGA TAATTGTTTC ATACAGATAG TTCCAAATTC TTTATTAAGC AAGGATGGGT GAACTTGTTT
ACTTGGTCAT ATGAAGTAAG CGTAGCTCCA TGTTTATCAC GATGATTCTA CTTCCTTTTC TGTTCATATC TTGTATAATG
AAACTTTTGG CGGTGTATTT GGGATTTTAA TAATTTTAGC AACTTTTAGA GAAAAGATGA AATGAGGTTT TTTAATTGAA
AAACTTCAGC AGCTTCTCTA GATATGCATT TTTTGTCTGG AGAAAGAGAA TTTATTTTCT GAAAATATAA TTTACTTGAG
TTTAATTTTA GTCAACTGCT CACAGTAATG TCATTCATAA TCTTTAATTT TAAGGTTTTG AATTTGTTAG ATGCAAACTT
CACCTTATTG AGTTAGTTTT ATGAGATTGA GTTAGATTAA AATTTCACTT TCTTAAAATG ATAACAAAGT CATTGAGATC
CTATCCTAGT CAATCTTGTT GGGTCTTGTG TTATGTGTAA TCAGGTTTTC TCTTGCTCTA CACTCGAGAT GCCTAGTTCT
TGGCATAAGA GAGTGTGTTG AATATCCCAC AATGACAAGA GATATAGTCA AATTATAATA TATAGGATGA TACAAACTTC
ACGTCACTAA ATTTGTTTGG TGAAGTTGAG TTATGTTTAA ATTTCACTTT CTTAATTAAT TGTAATCTAA CATAACTCAT
TGGCTCCTTC CATGAATTTC AATGTTGTTA TGCAGTTCGA AAGATTGTAT CGACTATTAA TAGTTTTTAT GTTGTTTCAG
GTGGGTATAA TCATGTACCT CCCTACCATG GATGCTCGGC AGAGGAAGGA TATAACAGAA GAATTCTTTC ATTACAGGCA
TCTGACTCAG GCGACATTAT GGGATCGTTA CTCTGCATTT GAACACTGGG CTAAGATTGA GGTAATCATC TAATTATCAT
AAATAATGAA AAATGGTCGA ACATGGTATT TGGACATGAT TACCCTAAAT AATCTGATAT TTGTTCTCAA TCATTATCAT
TGAACCTAGG CTGAATGAAA GGGTTTAAAC ACTGAAGTTT ACTTAATTTT TGTGCATATT ATATCTAGGT TCCAAAGGAT
AAGGAGGAAC TTGCAGCTCT CCAAGCAAGG CTAAGAAAGA GGTTTCCTGT GGATTCATAC AATAAAGCAA GAAAGGACCT
GGACCCCAAT AGGATCCTTT CAAATAACAT GTTGGAAAAG CTCTTCGCGC AATCACACAC CATATAAATT CTGGGTTGGT
TATTTGTCTA AATTGTCCAT ATTTTTCACG TCGATTACAC ATTCAACCTT GATTTCTTGT CTGCAGTCAC ATACATGTTG
GAACTTCGAG ATGCAAAATA TCTGGTGCAC AATCTGGACT ATTATGCATA TTCAATTTTT CAGTTTATTG CCTGCCTGCC
AGATGCATTG GACTCGGAAG CTTAAAGAAT TGTGATGTAT GTACATATAG AGGTGCTGAA AGAGGAAGCA TAGAGAAAGG
GTGCTGGGGG GAACTGGAGG AGAAAATATT TTGATATAGT TGTATGAATT GCTGCCTGAT AAGCGTCAAT CATGGCCATC
ATACTTCATT TTTTTGCGTT CAATTGTTAT TCCACAACTT GTTTGAGATT TCTAAAAACA TTTTTCTTGT CATGATAAAC
ATCGGATGCA AGACCTTTCG AAAGAAATAA TGGGGATTAC TCCAATTGGT ATCCATATTT TTTTCTCAAG ATATTAGTAC
CTTGGGTATC AAACATATAC TGTTTATTAA 

>Vigan.08G322700.01
TTTAGTAGAA TTTTAAAATG GATAATTAAC TCAAATTCCA TCACTTCTCT GTTTGCTCAT CATAGTTGAG CGCAGACATG
CTGAGAACAC TAGTTCTGAA GCGCACCGTC GCTCTCACTC GCCAACATTC GCACTCCGTG CTCTTCCGCC GATTTTCGGC
GGCGCCGGAA CCCGCCTCCT CCGCCGATGC AGAAACCCGC AAGTACGCGG GCTACGCGGC GCTGCTCCTC TTCTGCGGTG
CCGCCACCTA TTACAGCTTC CCCCTGCCGG ACGATGCCAA GCACAAGAAG GCGCAGATCT TCCGGTACGC GCCGTTGCCG
GAGGACCTGC ACACGGTGTC GAACTGGAGC GGGACGCACG AGGTGCACAC TCGCAACTTC TTCCAGCCGG AGAACGTGGA
ACAGCTGGAG CGCGTGGTGA GGGAGGCGAA CGAGAAGAGA GCCCGAATCC GTCCGGTCGG GTCGGGGCTG TCGCCGAACG
GGATTGGGCT TTCGAGGGTC GGAATGGTGA ACTTGGCGCT GATGGATGGG ATATTGGAAG TGGACAAGCA GAGTAAGACT
GTGAGGGTGC AGGCCGGGAT CAGAGTGCAG CAGCTTGTGG ATGGACTCAA GGACCACGGT CTTACCTTGC AGAATTTTGC
TTCCATTAGG GAGCAACAAA TTGGTGGCAT CATTCAGGTT GGTGCACATG GCACCGGTGC AAAGTTGCCT CCTATTGATG
AACAAGTGAT TGCCATGAAA TTGGTCACCC CTGCCAAAGG GACTATAGAA ATATCGAAAG ATAAAGATCC TGAGCTGTTT
TATCTTGCTC GATGTGGTCT TGGAGGACTT GGAGTTGTGG CTGAAGTCAC CCTTCAATGT GTTGATCGAC AGGAGCTTGT
GGAGCACACA TTTGTCTCAA CCATGAAGGA GATAAAGAGA AATCACAAGA AATTGTTGTC TGACAATAAG CATGTGAAGT
ACCTTTATAT CCCTTACACC GACACTGTTG TGGTTGTGCG GTGCAATCCT GTTTCAAAGT GGAAAGGTCC TCCCAAGTTT
AAACCACAGT ATACTAAAGA TGAAGCCATA CAGCATGTGC GTGACCTTTA CAGGGAGTCC CTCCAGAAAT ATGGAAGAGG
AGGATCTAGG GGTGAATCAG CAGAAGAACA AAAAATAGAT GAACTTTCTT TCACAGAATT AAGAGATAAA CTAATTGCCC
TGGATCCTCT CAATAAAAAG CACATCATCA GCATTAATCA AGCTGAGGCC GAGTTCTGGC GGAAGTCAGA AGGTTACAGG
GTTGGATGGA GTGATGAAAT ATTGGGCTTT GATTGTGGAG GCCAACAGTG GGTATCGGAG ACATGTTTCC CAGCTGGAAA
ACTAGCTAAT CCAAGCATGA AAGACCTTGA ATACATTGAA GAGCTGAAGC AACTTATAGA GAATGAAGAG ATACCTGCAC
CTGCTCCAAT TGAGCAACGT TGGACAGCGA GCAGTAGGAG TCCCTTGAGT CCTGCTTCAA GCCCATCTGA GGATGATATA
TTTTCTTGGG TGGGTATAAT CATGTACCTC CCTACCATGG ATGCTCGGCA GAGGAAGGAT ATAACAGAAG AATTCTTTCA
TTACAGGCAT CTGACTCAGG CGACATTATG GGATCGTTAC TCTGCATTTG AACACTGGGC TAAGATTGAG GTTCCAAAGG
ATAAGGAGGA ACTTGCAGCT CTCCAAGCAA GGCTAAGAAA GAGGTTTCCT GTGGATTCAT ACAATAAAGC AAGAAAGGAC
CTGGACCCCA ATAGGATCCT TTCAAATAAC ATGTTGGAAA AGCTCTTCGC GCAATCACAC ACCATATAAA TTCTGGGTTG
GTTATTTGTC TAAATTGTCC ATATTTTTCA CGTCGATTAC ACATTCAACC TTGATTTCTT GTCTGCAGTC ACATACATGT
TGGAACTTCG AGATGCAAAA TATCTGGTGC ACAATCTGGA CTATTATGCA TATTCAATTT TTCAGTTTAT TGCCTGCCTG
CCAGATGCAT TGGACTCGGA AGCTTAAAGA ATTGTGATGT ATGTACATAT AGAGGTGCTG AAAGAGGAAG CATAGAGAAA
GGGTGCTGGG GGGAACTGGA GGAGAAAATA TTTTGATATA GTTGTATGAA TTGCTGCCTG ATAAGCGTCA ATCATGGCCA
TCATACTTCA TTTTTTTGCG TTCAATTGTT ATTCCACAAC TTGTTTGAGA TTTCTAAAAA CATTTTTCTT GTCATGATAA
ACATCGGATG CAAGACCTTT CGAAAGAAAT AATGGGGATT ACTCCAATTG GTATCCATAT TTTTTTCTCA AGATATTAGT
ACCTTGGGTA TCAAACATAT ACTGTTTATT AA

>Vigan.08G322700.01
ATGCTGAGAA CACTAGTTCT GAAGCGCACC GTCGCTCTCA CTCGCCAACA TTCGCACTCC GTGCTCTTCC GCCGATTTTC
GGCGGCGCCG GAACCCGCCT CCTCCGCCGA TGCAGAAACC CGCAAGTACG CGGGCTACGC GGCGCTGCTC CTCTTCTGCG
GTGCCGCCAC CTATTACAGC TTCCCCCTGC CGGACGATGC CAAGCACAAG AAGGCGCAGA TCTTCCGGTA CGCGCCGTTG
CCGGAGGACC TGCACACGGT GTCGAACTGG AGCGGGACGC ACGAGGTGCA CACTCGCAAC TTCTTCCAGC CGGAGAACGT
GGAACAGCTG GAGCGCGTGG TGAGGGAGGC GAACGAGAAG AGAGCCCGAA TCCGTCCGGT CGGGTCGGGG CTGTCGCCGA
ACGGGATTGG GCTTTCGAGG GTCGGAATGG TGAACTTGGC GCTGATGGAT GGGATATTGG AAGTGGACAA GCAGAGTAAG
ACTGTGAGGG TGCAGGCCGG GATCAGAGTG CAGCAGCTTG TGGATGGACT CAAGGACCAC GGTCTTACCT TGCAGAATTT
TGCTTCCATT AGGGAGCAAC AAATTGGTGG CATCATTCAG GTTGGTGCAC ATGGCACCGG TGCAAAGTTG CCTCCTATTG
ATGAACAAGT GATTGCCATG AAATTGGTCA CCCCTGCCAA AGGGACTATA GAAATATCGA AAGATAAAGA TCCTGAGCTG
TTTTATCTTG CTCGATGTGG TCTTGGAGGA CTTGGAGTTG TGGCTGAAGT CACCCTTCAA TGTGTTGATC GACAGGAGCT
TGTGGAGCAC ACATTTGTCT CAACCATGAA GGAGATAAAG AGAAATCACA AGAAATTGTT GTCTGACAAT AAGCATGTGA
AGTACCTTTA TATCCCTTAC ACCGACACTG TTGTGGTTGT GCGGTGCAAT CCTGTTTCAA AGTGGAAAGG TCCTCCCAAG
TTTAAACCAC AGTATACTAA AGATGAAGCC ATACAGCATG TGCGTGACCT TTACAGGGAG TCCCTCCAGA AATATGGAAG
AGGAGGATCT AGGGGTGAAT CAGCAGAAGA ACAAAAAATA GATGAACTTT CTTTCACAGA ATTAAGAGAT AAACTAATTG
CCCTGGATCC TCTCAATAAA AAGCACATCA TCAGCATTAA TCAAGCTGAG GCCGAGTTCT GGCGGAAGTC AGAAGGTTAC
AGGGTTGGAT GGAGTGATGA AATATTGGGC TTTGATTGTG GAGGCCAACA GTGGGTATCG GAGACATGTT TCCCAGCTGG
AAAACTAGCT AATCCAAGCA TGAAAGACCT TGAATACATT GAAGAGCTGA AGCAACTTAT AGAGAATGAA GAGATACCTG
CACCTGCTCC AATTGAGCAA CGTTGGACAG CGAGCAGTAG GAGTCCCTTG AGTCCTGCTT CAAGCCCATC TGAGGATGAT
ATATTTTCTT GGGTGGGTAT AATCATGTAC CTCCCTACCA TGGATGCTCG GCAGAGGAAG GATATAACAG AAGAATTCTT
TCATTACAGG CATCTGACTC AGGCGACATT ATGGGATCGT TACTCTGCAT TTGAACACTG GGCTAAGATT GAGGTTCCAA
AGGATAAGGA GGAACTTGCA GCTCTCCAAG CAAGGCTAAG AAAGAGGTTT CCTGTGGATT CATACAATAA AGCAAGAAAG
GACCTGGACC CCAATAGGAT CCTTTCAAAT AACATGTTGG AAAAGCTCTT CGCGCAATCA CACACCATAT AA

>Vigan.08G322700.01
MLRTLVLKRT VALTRQHSHS VLFRRFSAAP EPASSADAET RKYAGYAALL LFCGAATYYS FPLPDDAKHK KAQIFRYAPL
PEDLHTVSNW SGTHEVHTRN FFQPENVEQL ERVVREANEK RARIRPVGSG LSPNGIGLSR VGMVNLALMD GILEVDKQSK
TVRVQAGIRV QQLVDGLKDH GLTLQNFASI REQQIGGIIQ VGAHGTGAKL PPIDEQVIAM KLVTPAKGTI EISKDKDPEL
FYLARCGLGG LGVVAEVTLQ CVDRQELVEH TFVSTMKEIK RNHKKLLSDN KHVKYLYIPY TDTVVVVRCN PVSKWKGPPK
FKPQYTKDEA IQHVRDLYRE SLQKYGRGGS RGESAEEQKI DELSFTELRD KLIALDPLNK KHIISINQAE AEFWRKSEGY
RVGWSDEILG FDCGGQQWVS ETCFPAGKLA NPSMKDLEYI EELKQLIENE EIPAPAPIEQ RWTASSRSPL SPASSPSEDD
IFSWVGIIMY LPTMDARQRK DITEEFFHYR HLTQATLWDR YSAFEHWAKI EVPKDKEELA ALQARLRKRF PVDSYNKARK
DLDPNRILSN NMLEKLFAQS HTI*