GBrowse Details

Vigan.08G208500.01

Basic Information:
Name: Vigan.08G208500.01
Multiple alignment
Variant Information
Position: Chr08:18830983..18834247 (- strand)
Length: 3265
Functional Information:
Description: Similar to 70 kDa heat shock cognate protein 2. [Q5QHT3, Vigna radiata]
InterPro: Heat shock protein 70 family (IPR013126)
Heat shock protein 70, conserved site (IPR018181)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:765.37,3099.45,265.00,207.83,404.99,543.23,640.73,253.56
Arabidopsis thaliana homolog: AT1G09080.1, AT1G16030.1, AT1G56410.1, AT3G09440.1, AT3G12580.1, AT4G24280.1, AT5G02490.1, AT5G02500.1, AT5G09590.1, AT5G28540.1, AT5G42020.1
Automatic updates:
Name: NM_001317268 NCBI(nuccore)
Organism: Vigna radiata
Description: Vigna radiata heat shock cognate 70 kDa protein 2-like (LOC106771978), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:18830983..18831344 (- strand)
Length: 362
Type: three_prime_UTR
Position: Chr08:18831345..18833077 (- strand)
Length: 1733
Type: CDS
Position: Chr08:18833958..18834171 (- strand)
Length: 214
Type: CDS
Position: Chr08:18834172..18834247 (- strand)
Length: 76
Type: five_prime_UTR

>Vigan.08G208500.01 class=Sequence position=Chr08:18830983..18834247 (- strand)
CTCAACTTCG AAACCCAGCC GCGGTTCTAA ACCTCTCGGA TCTCTCTTCA TCAGCCGACA CAACATCAAA CTCAGCATGG
CCGGCAAGGG TGAGGGTCCA GCCATCGGAA TCGATCTTGG AACCACGTAC TCCTGCGTTG GTGTCTGGCA GCATGATCGC
GTCGAGATCA TTGCCAACGA CCAAGGTAAC AGAACGACAC CGTCTTATGT CGGGTTCACC GACACCGAGC GTCTCATCGG
TGATGCCGCC AAGAACCAGG TCGCCATGAA CCCTATTAAC ACCGTTTTTG GTAAGTTCTT TTCCTTCAGT CGTATAGCTA
TGATACCAAG ATTCATTTTT ACTGCATGTT TATCGTTTAA TGTAGATGTT CTTGTTGGTG TTATGCTGTT TTTTTTGCTT
GCGTGTGTGA CTTGGATTGG ACAGTTGATT TTTAGCTTCT TTTTTTTTTA CTTTTTTTTT TCATATTTTT CCTTTTCTTT
TTAGTTTGCC TATGCATGTG CCTGTAAAAT CTTTACTTTG CTGTGCGTGA TGCGATTTTG ATGGATATTG TTCCTGTTTT
CTAGTGCTGA ATACTGAACG ATAATTGAGC TATCTTGCGC ACCTTTTCTT ACTGCAGATT GTTATGTGTT GTAGTAGTCG
TGACGTGAAC ACATGTTGCT CCTGTTAGAT TATAAGGGGT TTTGGCCGTG CGCTTGGTTA TGTGCATGTG TATAAAGAAT
GTGTGTTTTT GATGAAAATT ACATGTTCAG AAGGGTCCGT GATTTGAATG CATCATGAAT TTGTTTAGGG AATTGAGTTT
CTTTAATAAA TTAAATCAGC ATATATACTT CACTTTTTTT TTCTTTGGAG AACTTTGATG TTTGGGGATT GTGCACCAGT
GGTTTTTGAC TTGGAAGGGA AAATAAATAT CAAATGCTTG TGAAAAGTTT ATTCACATAT GATATGACCT TCATTTTGAC
CATAATTTAA CTGTTTTGAC TAAGTAAAGT TTTCACGTTA TTTTCCCTAA AATTCGGCTA TTGAAATGTC CTGGTCCAGG
TCGGGTTTTT TTTAGTATTT AGTCGTTCCT TTTACTGTAG AGTAGACCGT GGCTTGTGTG TTGACAGCTT GTATTCGTTA
ATGTGAATTA CAGTGCACAT GCTTATATGT TTTCTTTCTG TCTCTTACAG ATGCCAAGAG ATTGATTGGT CGTAGGTTCA
CCGATGCCTC TGTTCAGAGT GATATTAAAT TGTGGCCTTT TAAGGTGTTT TCTGGACCCG GTGATAAGCC AATGATTCAG
GTTAACTACA AGGGTGAAGA TAAGCAGTTT TCCGCTGAAG AAATCTCTTC TATGGTACTT ATGAAAATGC GTGAGATTGC
TGAAGCTTAT CTTGGCACTA CGATAAAAAA TGCTGTTGTT ACTGTCCCTG CTTACTTTAA CGATTCTCAG CGTCAAGCTA
CCAAGGATGC TGGTGTTATT GCTGGTCTTA ATGTCATGCG TATTATCAAT GAGCCTACTG CTGCGGCTAT TGCTTATGGT
CTTGACAAGA AGGCTACCAG CGTCGGTGAG AAGAATGTGT TGATTTTTGA TCTAGGGGGT GGTACCTTTG ATGTCTCTTT
GCTAACCATT GAAGAGGGTA TCTTTGAGGT GAAAGCCACA GCTGGGGACA CTCATCTCGG AGGTGAGGAT TTTGATAACA
GGATGGTGAA TCATTTTGTT CAGGAGTTCA AGAGAAAAAA CAAGAAGGAT ATCAGTGGCA ACCCCAGAGC ACTTAGGAGG
TTGAGGACTG CTTGTGAGAG GGCAAAAAGA ACTCTGTCCT CCACTGCCCA AACCACCATT GAAATTGATT CTCTGTATGA
AGGAATTGAT TTCTATTCCA CCATTACCCG TGCAAGGTTT GAAGAGCTTA ATATGGATCT CTTCCGGAAG TGCATGGAAC
CAGTTGAGAA GTGTTTAAGA GATGCTAAGA TGGACAAGAG GACTGTCCAT GATGTTGTTC TTGTTGGTGG TTCTACCAGA
ATTCCCAAGG TTCAACAACT TCTGCAGGAT TTCTTTAACG GGAAGGAGCT CTGCAAGAGC ATCAATCCTG ATGAGGCTGT
GGCATATGGT GCTGCTGTAC AAGCTGCTAT CTTGAGTGGT GAGGGTAACG AGAAGGTGCA AGATCTTCTC CTGCTTGATG
TCACCCCACT CTCTCTCGGG TTGGAAACTG CTGGTGGGGT TATGACTGTC TTGATCCCCA GGAACACTAC AATCCCAACA
AAGAAAGAAC AGGTTTTCTC AACCTATTCT GATAACCAGC CAGGTGTTTT GATCCAGGTT TATGAAGGTG AGAGAACAAG
GACCAGAGAT AACAATTTGC TGGGTAAATT TGAACTTTCG GGCATTCCTC CTGCACCCAG GGGTGTTCCT CAAATCACAG
TGTGCTTCGA CATTGATGCC AATGGTATCT TGAATGTCTC TGCCGAAGAC AAAACTACTG GCCAAAAGAA CAAGATCACC
ATTACCAACG ATAAGGGTAG GTTGTCAAAG GATGAAATTG AGAAGATGGT GCAAGAGGCT GAGAAGTACA AGTCTGAAGA
TGAAGAGCAT AAGAAGAAGG TAGAAGCAAA GAATGCATTG GAGAACTACG CATACAACAT GAGGAATACT GTGAAGGATG
AGAAGATTGG AGGAAAGCTT GACCCAGCTG ACAAGAAGAA GATCGAGGAT GCTGTTGAGC AGACTATCCA GTGGCTGGAC
AGCAACCAAC TTGGAGAGGC AGATGAGTTT GAGGACAAAA TGAAGGAATT GGAAAGCATC TGCAATCCTA TCATTGCCAA
GATGTACCAG GGAGGTGCTG GTCCAGACAT GGGAGGTGGA ATGGACGATG ATGTGCCTGC TGGTGGAAGT GGTGCTGGTC
CAAAGATTGA GGAAGTAGAT TAAATTTAGT TAATGCCTCT GCTTGATTTG AAGTATTTTG TTTTTGGATA ATCGTTTCAC
TTTTATTTGT TGAGACATAC AAGCTTTTAA GCTTGTGTTG TGTTATGGTT GTTCAGTATT TATTTATCAT GTTTTGTTGT
GAGTTTATAA TACGGATCAC GGTTTCTCTG TTCTGGTTCA TTATGGATGA CTTAAGACCT TCTCAGATGG GTTAGTTAGT
GTACATTTTC ACTGAGGCAT CACATTCAGA GAATGTTCCT TCTTAAATTA AACATCATGT TAGCAGGGTA TTTGTTCCGA
CCTTGTGTTC AACTTGATAA CCACTAAAAT CGTGGTATTT TCACACTCAA ATTTCTTTAA TATCC

>Vigan.08G208500.01
CTCAACTTCG AAACCCAGCC GCGGTTCTAA ACCTCTCGGA TCTCTCTTCA TCAGCCGACA CAACATCAAA CTCAGCATGG
CCGGCAAGGG TGAGGGTCCA GCCATCGGAA TCGATCTTGG AACCACGTAC TCCTGCGTTG GTGTCTGGCA GCATGATCGC
GTCGAGATCA TTGCCAACGA CCAAGGTAAC AGAACGACAC CGTCTTATGT CGGGTTCACC GACACCGAGC GTCTCATCGG
TGATGCCGCC AAGAACCAGG TCGCCATGAA CCCTATTAAC ACCGTTTTTG ATGCCAAGAG ATTGATTGGT CGTAGGTTCA
CCGATGCCTC TGTTCAGAGT GATATTAAAT TGTGGCCTTT TAAGGTGTTT TCTGGACCCG GTGATAAGCC AATGATTCAG
GTTAACTACA AGGGTGAAGA TAAGCAGTTT TCCGCTGAAG AAATCTCTTC TATGGTACTT ATGAAAATGC GTGAGATTGC
TGAAGCTTAT CTTGGCACTA CGATAAAAAA TGCTGTTGTT ACTGTCCCTG CTTACTTTAA CGATTCTCAG CGTCAAGCTA
CCAAGGATGC TGGTGTTATT GCTGGTCTTA ATGTCATGCG TATTATCAAT GAGCCTACTG CTGCGGCTAT TGCTTATGGT
CTTGACAAGA AGGCTACCAG CGTCGGTGAG AAGAATGTGT TGATTTTTGA TCTAGGGGGT GGTACCTTTG ATGTCTCTTT
GCTAACCATT GAAGAGGGTA TCTTTGAGGT GAAAGCCACA GCTGGGGACA CTCATCTCGG AGGTGAGGAT TTTGATAACA
GGATGGTGAA TCATTTTGTT CAGGAGTTCA AGAGAAAAAA CAAGAAGGAT ATCAGTGGCA ACCCCAGAGC ACTTAGGAGG
TTGAGGACTG CTTGTGAGAG GGCAAAAAGA ACTCTGTCCT CCACTGCCCA AACCACCATT GAAATTGATT CTCTGTATGA
AGGAATTGAT TTCTATTCCA CCATTACCCG TGCAAGGTTT GAAGAGCTTA ATATGGATCT CTTCCGGAAG TGCATGGAAC
CAGTTGAGAA GTGTTTAAGA GATGCTAAGA TGGACAAGAG GACTGTCCAT GATGTTGTTC TTGTTGGTGG TTCTACCAGA
ATTCCCAAGG TTCAACAACT TCTGCAGGAT TTCTTTAACG GGAAGGAGCT CTGCAAGAGC ATCAATCCTG ATGAGGCTGT
GGCATATGGT GCTGCTGTAC AAGCTGCTAT CTTGAGTGGT GAGGGTAACG AGAAGGTGCA AGATCTTCTC CTGCTTGATG
TCACCCCACT CTCTCTCGGG TTGGAAACTG CTGGTGGGGT TATGACTGTC TTGATCCCCA GGAACACTAC AATCCCAACA
AAGAAAGAAC AGGTTTTCTC AACCTATTCT GATAACCAGC CAGGTGTTTT GATCCAGGTT TATGAAGGTG AGAGAACAAG
GACCAGAGAT AACAATTTGC TGGGTAAATT TGAACTTTCG GGCATTCCTC CTGCACCCAG GGGTGTTCCT CAAATCACAG
TGTGCTTCGA CATTGATGCC AATGGTATCT TGAATGTCTC TGCCGAAGAC AAAACTACTG GCCAAAAGAA CAAGATCACC
ATTACCAACG ATAAGGGTAG GTTGTCAAAG GATGAAATTG AGAAGATGGT GCAAGAGGCT GAGAAGTACA AGTCTGAAGA
TGAAGAGCAT AAGAAGAAGG TAGAAGCAAA GAATGCATTG GAGAACTACG CATACAACAT GAGGAATACT GTGAAGGATG
AGAAGATTGG AGGAAAGCTT GACCCAGCTG ACAAGAAGAA GATCGAGGAT GCTGTTGAGC AGACTATCCA GTGGCTGGAC
AGCAACCAAC TTGGAGAGGC AGATGAGTTT GAGGACAAAA TGAAGGAATT GGAAAGCATC TGCAATCCTA TCATTGCCAA
GATGTACCAG GGAGGTGCTG GTCCAGACAT GGGAGGTGGA ATGGACGATG ATGTGCCTGC TGGTGGAAGT GGTGCTGGTC
CAAAGATTGA GGAAGTAGAT TAAATTTAGT TAATGCCTCT GCTTGATTTG AAGTATTTTG TTTTTGGATA ATCGTTTCAC
TTTTATTTGT TGAGACATAC AAGCTTTTAA GCTTGTGTTG TGTTATGGTT GTTCAGTATT TATTTATCAT GTTTTGTTGT
GAGTTTATAA TACGGATCAC GGTTTCTCTG TTCTGGTTCA TTATGGATGA CTTAAGACCT TCTCAGATGG GTTAGTTAGT
GTACATTTTC ACTGAGGCAT CACATTCAGA GAATGTTCCT TCTTAAATTA AACATCATGT TAGCAGGGTA TTTGTTCCGA
CCTTGTGTTC AACTTGATAA CCACTAAAAT CGTGGTATTT TCACACTCAA ATTTCTTTAA TATCC

>Vigan.08G208500.01
ATGGCCGGCA AGGGTGAGGG TCCAGCCATC GGAATCGATC TTGGAACCAC GTACTCCTGC GTTGGTGTCT GGCAGCATGA
TCGCGTCGAG ATCATTGCCA ACGACCAAGG TAACAGAACG ACACCGTCTT ATGTCGGGTT CACCGACACC GAGCGTCTCA
TCGGTGATGC CGCCAAGAAC CAGGTCGCCA TGAACCCTAT TAACACCGTT TTTGATGCCA AGAGATTGAT TGGTCGTAGG
TTCACCGATG CCTCTGTTCA GAGTGATATT AAATTGTGGC CTTTTAAGGT GTTTTCTGGA CCCGGTGATA AGCCAATGAT
TCAGGTTAAC TACAAGGGTG AAGATAAGCA GTTTTCCGCT GAAGAAATCT CTTCTATGGT ACTTATGAAA ATGCGTGAGA
TTGCTGAAGC TTATCTTGGC ACTACGATAA AAAATGCTGT TGTTACTGTC CCTGCTTACT TTAACGATTC TCAGCGTCAA
GCTACCAAGG ATGCTGGTGT TATTGCTGGT CTTAATGTCA TGCGTATTAT CAATGAGCCT ACTGCTGCGG CTATTGCTTA
TGGTCTTGAC AAGAAGGCTA CCAGCGTCGG TGAGAAGAAT GTGTTGATTT TTGATCTAGG GGGTGGTACC TTTGATGTCT
CTTTGCTAAC CATTGAAGAG GGTATCTTTG AGGTGAAAGC CACAGCTGGG GACACTCATC TCGGAGGTGA GGATTTTGAT
AACAGGATGG TGAATCATTT TGTTCAGGAG TTCAAGAGAA AAAACAAGAA GGATATCAGT GGCAACCCCA GAGCACTTAG
GAGGTTGAGG ACTGCTTGTG AGAGGGCAAA AAGAACTCTG TCCTCCACTG CCCAAACCAC CATTGAAATT GATTCTCTGT
ATGAAGGAAT TGATTTCTAT TCCACCATTA CCCGTGCAAG GTTTGAAGAG CTTAATATGG ATCTCTTCCG GAAGTGCATG
GAACCAGTTG AGAAGTGTTT AAGAGATGCT AAGATGGACA AGAGGACTGT CCATGATGTT GTTCTTGTTG GTGGTTCTAC
CAGAATTCCC AAGGTTCAAC AACTTCTGCA GGATTTCTTT AACGGGAAGG AGCTCTGCAA GAGCATCAAT CCTGATGAGG
CTGTGGCATA TGGTGCTGCT GTACAAGCTG CTATCTTGAG TGGTGAGGGT AACGAGAAGG TGCAAGATCT TCTCCTGCTT
GATGTCACCC CACTCTCTCT CGGGTTGGAA ACTGCTGGTG GGGTTATGAC TGTCTTGATC CCCAGGAACA CTACAATCCC
AACAAAGAAA GAACAGGTTT TCTCAACCTA TTCTGATAAC CAGCCAGGTG TTTTGATCCA GGTTTATGAA GGTGAGAGAA
CAAGGACCAG AGATAACAAT TTGCTGGGTA AATTTGAACT TTCGGGCATT CCTCCTGCAC CCAGGGGTGT TCCTCAAATC
ACAGTGTGCT TCGACATTGA TGCCAATGGT ATCTTGAATG TCTCTGCCGA AGACAAAACT ACTGGCCAAA AGAACAAGAT
CACCATTACC AACGATAAGG GTAGGTTGTC AAAGGATGAA ATTGAGAAGA TGGTGCAAGA GGCTGAGAAG TACAAGTCTG
AAGATGAAGA GCATAAGAAG AAGGTAGAAG CAAAGAATGC ATTGGAGAAC TACGCATACA ACATGAGGAA TACTGTGAAG
GATGAGAAGA TTGGAGGAAA GCTTGACCCA GCTGACAAGA AGAAGATCGA GGATGCTGTT GAGCAGACTA TCCAGTGGCT
GGACAGCAAC CAACTTGGAG AGGCAGATGA GTTTGAGGAC AAAATGAAGG AATTGGAAAG CATCTGCAAT CCTATCATTG
CCAAGATGTA CCAGGGAGGT GCTGGTCCAG ACATGGGAGG TGGAATGGAC GATGATGTGC CTGCTGGTGG AAGTGGTGCT
GGTCCAAAGA TTGAGGAAGT AGATTAA

>Vigan.08G208500.01
MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVGFTDT ERLIGDAAKN QVAMNPINTV FDAKRLIGRR
FTDASVQSDI KLWPFKVFSG PGDKPMIQVN YKGEDKQFSA EEISSMVLMK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ
ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD
NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLYEGIDFY STITRARFEE LNMDLFRKCM
EPVEKCLRDA KMDKRTVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERTRTRDNN LLGKFELSGI PPAPRGVPQI
TVCFDIDANG ILNVSAEDKT TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVEAKNALEN YAYNMRNTVK
DEKIGGKLDP ADKKKIEDAV EQTIQWLDSN QLGEADEFED KMKELESICN PIIAKMYQGG AGPDMGGGMD DDVPAGGSGA
GPKIEEVD*