GBrowse Details

Vigan.08G194300.01

Basic Information:
Name: Vigan.08G194300.01
Multiple alignment
Variant Information
Position: Chr08:17246176..17247894 (+ strand)
Length: 1719
Functional Information:
Description: Similar to DNA methyltransferase 1-associated protein. [T2DMV6, Phaseolus vulgaris]
InterPro: Insulin-induced protein family (IPR025929)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.04,0.82,2.26,25.01,0.00,2.95,4.44,2.34
Arabidopsis thaliana homolog: AT4G01935.1
Automatic updates:
Name: BT090486 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-18K21 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:17246176..17246233 (+ strand)
Length: 58
Type: five_prime_UTR
Position: Chr08:17246234..17246530 (+ strand)
Length: 297
Type: CDS
Position: Chr08:17246626..17246744 (+ strand)
Length: 119
Type: CDS
Position: Chr08:17246928..17247116 (+ strand)
Length: 189
Type: CDS
Position: Chr08:17247221..17247272 (+ strand)
Length: 52
Type: CDS
Position: Chr08:17247353..17247463 (+ strand)
Length: 111
Type: CDS
Position: Chr08:17247464..17247894 (+ strand)
Length: 431
Type: three_prime_UTR

>Vigan.08G194300.01 class=Sequence position=Chr08:17246176..17247894 (+ strand)
TGAAAAAATA AGGAATGGTT TTTGTTTCTT TGTCTGAATA TCGCAAAGAG GGATAAGGAT GCAATACCTT GTTGCATGTG
CTTCCTCTTC CTCTTACTCT GTTCATGCTT ATACTCTCCT CCGCCACAGT TACCCTCTTC CCAGAATACG AAAATTGGGT
TTGCTTAAGG CGCAGTGTGC TAAGAGAAAA GAGAGCTCAA CAAACCTGAG AAGTTCATGG CCATCAATCT CACTAACACT
TTTTGGCACA GGCTTCTTAC TGGGTCCCCT TCTCGATGGA CTCCATTCCA GGGTCAATCT CGTCGTCTAC GACTCAGGCT
CCATTAACAT AGGTCCATTC CACACAAACA TCTGGGTGGG TTTCAACTTC AATTTTCTCT ACCCTTCTTT ATCCACTTTC
TTTATTGCCT TTGCTTTTTT ATTCATCTTC TCCGAAATCC AAATTCATAG GTGCCTTTCT TGCTAGGGCT ATTTTATTCC
TCTGTTGGTT TGCTTCAACT CTACCTAGAC CAAAAGTTCT TCAACAAAGT TCAAGACGCA AGTTTAGCAA AAACAATTGT
CTCACTCGTG TAAGTACCTG CTGCATTATA CAATAAAATA AAATAAAATC GTATTCGTAA GTATGGGGTT AGATATGATT
TGGGTCCAAT AAATATCTCA ACTTTCATTT TAGTCCTTAA TTTAATTAAG TGACATGATT TTAATCTTAC TTAATCATGA
TGTTTTCATA AATTGAGGTT GTCTTGTCCT AGATTGCTGG CGCTGTTTAT TGAAGTGAGT GCTGAACTTT ACAAAGGTGG
AATAGCGGAG AACATTGAGG CCTACATTTT GTTTGCTGCA GCAGAGTTGA TGTGGTTTTT GTTGGATAGG ACATGGCTAG
GTTTCACCTT GGCATGCATT GTTGGCCTTG CTTGCCCACT GGCTGAGGTT CCAATTATGA AGTAAACAGT TTCTCTCTTA
CCTTTCGATG TTTGCTTTTC CTTCATATGA CCAGTTGGAA TTTGAATATG CATGGTCGTT TCTCTTTTGC ACTTACTTCT
TTCAGGTTCT TCCACCTTTG GTATTACCCT AAACCCAACA TTGAAATCTT TGGTCAGGTG CATCATTTTT CAAACAGTTT
CCTCTAAACC TTTTATCAAA TTTTGAACTT GTTGATGATT TCTCTTTCTC ATGCCAGGGA ATGGTTACAT GGACACTCAC
TTGCTACTTC GTGTATACGC CATTCTTAAT CAATCTGTCA CGGTGGTTGA GAACAGTTTA TGCTCCTCCA ACAGATGAGT
CTGCCTAAAA CATTATGTAT CCCTGCTGCC TATTCCATTA ACATCAATAT ATGATGATAC TGATACATAT CAAACTCTAC
TCACAATGAC TTCTTATAGC TTAACCACTT CAATCAATTC TCTGCATCAA ATTTCTAACT CCTCTTTTCA ATCTATTCCT
ATCGAACATT AAACCGAGGT CTTCTTTATA TCAAGTTTGT CCATGTAATC TCGGCCTCAA AAATATCGGA TTTACAACTT
ATAATTTATA CTTCCACCAA TAGTTAATTA TTAGTTGTTT GAATGCAGAA TTAAAAGTCT TAACTTTAAA ATATTTCAAA
TGAGAAACTC TTAAAAGGCA TTGTGAGCTT GTGTGTATGC CCACATTGGC TTTTGTTCAT TGCATCATAC TTTTAAGAAC
ATTTATGATA TATACCGATT TTAAGCATGG CCTGTCGAG

>Vigan.08G194300.01
TGAAAAAATA AGGAATGGTT TTTGTTTCTT TGTCTGAATA TCGCAAAGAG GGATAAGGAT GCAATACCTT GTTGCATGTG
CTTCCTCTTC CTCTTACTCT GTTCATGCTT ATACTCTCCT CCGCCACAGT TACCCTCTTC CCAGAATACG AAAATTGGGT
TTGCTTAAGG CGCAGTGTGC TAAGAGAAAA GAGAGCTCAA CAAACCTGAG AAGTTCATGG CCATCAATCT CACTAACACT
TTTTGGCACA GGCTTCTTAC TGGGTCCCCT TCTCGATGGA CTCCATTCCA GGGTCAATCT CGTCGTCTAC GACTCAGGCT
CCATTAACAT AGGTCCATTC CACACAAACA TCTGGGTGCC TTTCTTGCTA GGGCTATTTT ATTCCTCTGT TGGTTTGCTT
CAACTCTACC TAGACCAAAA GTTCTTCAAC AAAGTTCAAG ACGCAAGTTT AGCAAAAACA ATTGTCTCAC TCGTATTGCT
GGCGCTGTTT ATTGAAGTGA GTGCTGAACT TTACAAAGGT GGAATAGCGG AGAACATTGA GGCCTACATT TTGTTTGCTG
CAGCAGAGTT GATGTGGTTT TTGTTGGATA GGACATGGCT AGGTTTCACC TTGGCATGCA TTGTTGGCCT TGCTTGCCCA
CTGGCTGAGG TTCCAATTAT GAAGTTCTTC CACCTTTGGT ATTACCCTAA ACCCAACATT GAAATCTTTG GTCAGGGAAT
GGTTACATGG ACACTCACTT GCTACTTCGT GTATACGCCA TTCTTAATCA ATCTGTCACG GTGGTTGAGA ACAGTTTATG
CTCCTCCAAC AGATGAGTCT GCCTAAAACA TTATGTATCC CTGCTGCCTA TTCCATTAAC ATCAATATAT GATGATACTG
ATACATATCA AACTCTACTC ACAATGACTT CTTATAGCTT AACCACTTCA ATCAATTCTC TGCATCAAAT TTCTAACTCC
TCTTTTCAAT CTATTCCTAT CGAACATTAA ACCGAGGTCT TCTTTATATC AAGTTTGTCC ATGTAATCTC GGCCTCAAAA
ATATCGGATT TACAACTTAT AATTTATACT TCCACCAATA GTTAATTATT AGTTGTTTGA ATGCAGAATT AAAAGTCTTA
ACTTTAAAAT ATTTCAAATG AGAAACTCTT AAAAGGCATT GTGAGCTTGT GTGTATGCCC ACATTGGCTT TTGTTCATTG
CATCATACTT TTAAGAACAT TTATGATATA TACCGATTTT AAGCATGGCC TGTCGAG

>Vigan.08G194300.01
ATGCAATACC TTGTTGCATG TGCTTCCTCT TCCTCTTACT CTGTTCATGC TTATACTCTC CTCCGCCACA GTTACCCTCT
TCCCAGAATA CGAAAATTGG GTTTGCTTAA GGCGCAGTGT GCTAAGAGAA AAGAGAGCTC AACAAACCTG AGAAGTTCAT
GGCCATCAAT CTCACTAACA CTTTTTGGCA CAGGCTTCTT ACTGGGTCCC CTTCTCGATG GACTCCATTC CAGGGTCAAT
CTCGTCGTCT ACGACTCAGG CTCCATTAAC ATAGGTCCAT TCCACACAAA CATCTGGGTG CCTTTCTTGC TAGGGCTATT
TTATTCCTCT GTTGGTTTGC TTCAACTCTA CCTAGACCAA AAGTTCTTCA ACAAAGTTCA AGACGCAAGT TTAGCAAAAA
CAATTGTCTC ACTCGTATTG CTGGCGCTGT TTATTGAAGT GAGTGCTGAA CTTTACAAAG GTGGAATAGC GGAGAACATT
GAGGCCTACA TTTTGTTTGC TGCAGCAGAG TTGATGTGGT TTTTGTTGGA TAGGACATGG CTAGGTTTCA CCTTGGCATG
CATTGTTGGC CTTGCTTGCC CACTGGCTGA GGTTCCAATT ATGAAGTTCT TCCACCTTTG GTATTACCCT AAACCCAACA
TTGAAATCTT TGGTCAGGGA ATGGTTACAT GGACACTCAC TTGCTACTTC GTGTATACGC CATTCTTAAT CAATCTGTCA
CGGTGGTTGA GAACAGTTTA TGCTCCTCCA ACAGATGAGT CTGCCTAA

>Vigan.08G194300.01
MQYLVACASS SSYSVHAYTL LRHSYPLPRI RKLGLLKAQC AKRKESSTNL RSSWPSISLT LFGTGFLLGP LLDGLHSRVN
LVVYDSGSIN IGPFHTNIWV PFLLGLFYSS VGLLQLYLDQ KFFNKVQDAS LAKTIVSLVL LALFIEVSAE LYKGGIAENI
EAYILFAAAE LMWFLLDRTW LGFTLACIVG LACPLAEVPI MKFFHLWYYP KPNIEIFGQG MVTWTLTCYF VYTPFLINLS
RWLRTVYAPP TDESA*