GBrowse Details

Vigan.08G073700.01

Basic Information:
Name: Vigan.08G073700.01
Multiple alignment
Variant Information
Position: Chr08:5848720..5852768 (+ strand)
Length: 4049
Functional Information:
Description: Similar to uncharacterized protein. [D7T1T6, Vitis vinifera]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.40,10.60,14.36,9.97,15.74,11.66,14.58,14.32
Arabidopsis thaliana homolog: AT5G51840.1
Automatic updates:
Name: BT095425 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-19I10 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:5848720..5848957 (+ strand)
Length: 238
Type: five_prime_UTR
Position: Chr08:5848958..5849041 (+ strand)
Length: 84
Type: CDS
Position: Chr08:5849119..5849150 (+ strand)
Length: 32
Type: CDS
Position: Chr08:5850758..5850855 (+ strand)
Length: 98
Type: CDS
Position: Chr08:5850970..5851052 (+ strand)
Length: 83
Type: CDS
Position: Chr08:5851673..5851750 (+ strand)
Length: 78
Type: CDS
Position: Chr08:5851823..5851921 (+ strand)
Length: 99
Type: CDS
Position: Chr08:5852308..5852601 (+ strand)
Length: 294
Type: CDS
Position: Chr08:5852602..5852768 (+ strand)
Length: 167
Type: three_prime_UTR

>Vigan.08G073700.01 class=Sequence position=Chr08:5848720..5852768 (+ strand)
GGCGACTCCG GCTAACGTGC TATGCACGTG CAAAAGATTG AATCATCCAT CCACGCTAAC TGAATCTGTA ACAGCGTGAC
ACAGGCCATC TCCGCTTTGG GTTCTTCAAA CCGCGTTTCT CTCGAACCGG ACGTCGTTGG ATACGGTCCA ACCGGGTTGA
AGCCGCTGCT TGGAAATCAC AGACCTGGAG GCGGCGGCAC ACGACGGATT TGTGGAATGC GAGTGATTGG ATTCCAAAAT
GACTTCGAAC CCTTCACTTC TCCCTGAGAT CGGACCTGAC GGTCTCGCTA AAGAAGCCCC CGTCATCAGC TACACAGAGA
AGGTTCTCCT CATCGCCATT TTGGTTTCGC TTTGTCATTG CTGGATTTTT TTTCATTGTT TTTCTTCTTG TTGTTGCAGA
TCATCGAAGC AGAACAGCTT CAATTGCAGA AGTAACCTCT CTCCCTATTT CTCTTTACTG GGATCTGATA ATTAATTTGT
TCTCCTTTGT GTTTGCACTT ATTATGTGTT TGCACTTACA ACATTGTTTG GATTTGTTGA AATCGAATTA CTTGACTTAG
GATTTTGTGT GTGCTATTTT CATGTGCTTA TTAAGACTTT CGGTAGAAAT TGGAGATTTT ATAATGAATT TGTGTAATTC
TGTGACTCTC CGTGCAATAT CAAGTAGCCA ATGGCTGTGG AAGATATAGA CTTTATTTTG ATATCTACTT AGCTATAAGC
TACGGAATGA CTAGAATGTT TTTTTACTGT AATCCCTGAG TGAATGGTTT TAGGTCAGTG ATTGTGTTGT GAGGGATTCA
GTTGGGTATA TGAAGCAATG ATCTTAATAA CATTTTTTGT GAAATATGGT TTCGTAAAGC TTGAAGAGCA GGTAATATGT
TGCTAGCAGA AGGAATTAAA GCCGCTGGTT TTTGCCGTGA AATGTTGGTT GGAATGTTAA GGTGAATGAA ATTCATTGTG
ATGCTGTGGT GATAGTAACA TTACTGATTT GTTTGGGCTG AGGGAGTGGA AAAGGAAATA GAAAGAGGAA AAGAGAGTAG
AAAATAAAGT TGGTTGGATT AGATGAGAAT TAGTGTAAAT AACTGGAAAA TGAGATATAT CTATTCGTTA TTTTGTAAGA
AAGTAGATTT TAACTTGATC ATAATTCAAT ATGAGATTTG CATCTTAAAA AAAATATTTT ATGTTTAACT CAATGTCACA
AATCTGTATT TAAGACGATG TTTGCGTTGT ACATTATAAT ATGACTTTAT CTCTAATAAT ATGACTTTAT CTCTAATTGA
TATGAGATTT CTAACATTAT TAGTAGTTTT CTCATTTATT ATTTTAATTT AATTTAAATT AATTATTATT GTTATTATAC
TAATAAAGAA AATATAAATA TTAATAAAAT ATTAGGGATA TAATTGTTAT GGCTCAATGG CCTCTTATCA CCTTAATTTT
TCAGATTTTT TATTTTGTTT TTCTTGTTTT CCAGTTCTCC ACCCTTTTCG TGGCTTGTAT AAACCTTCCT CACCCTGAAG
CAAACCGCCC TTAATTCATT TTTATGATGT ACCACAAGGA TGGTGGCGGC AGGAAATATA TATGGAATTT GAATAGTTTT
GTTGGGTGTT TTCACTGTTC TGAACTTGTA ATTTCGTGTA AAATATATAG ATAATGAAGT AATACCTGTG TTTTGTGTTT
AAAGCAATTC AATAGGGTTA AGATCGAGGA ACAGAATCAT TGTTAACTTT GTTGAGGAAC TAATATCTAG CTGGGACATA
CAAGACATTT GGGATTATAG CAATTAATCT TGCAAAATGT GAATAATTGG GAAAAAAAAA TTGCTGTCTT GTAGTACTGA
TAAAAACAGG ATCTTGGGTA ATTTGATCCT TTTTCAACTT TACTGCATGA TGTGATTGAT GGTTTGAAAA GGTCTTTATT
TATTATCAGT TTTGATTGCG TACTCTATGT AGGCAAACAA GTAACTGGAC TCAATCATCT TTACCACTCG TTATTGTTAT
TATTATTGTT GTCAGTATTA TTTTGTTATT ATCTTCAGAT ACATTCAAGA AAACTATTCT AAAATTCGTG ATGTGGAGCG
TGAGCTTGCA AATCTTTCAC TGGAGATGAA ACTTACAGCT GGTCCGAAAA AAGCAGGTTT CTACAAATTA TTGTTGGCCT
TTCTGGAACC AATTTAAAAA GGTTGTTATT CCCTGGTTAT TGTAGTGAAA TGACTTTGCT TTATTTTTTA TACATGATGC
ATACTTTAAG CACTTGAACA TTTGAGAAAG AAAATTGAGA CGTCAACAGA AAGAATCCGT GTGGCCAAGC TAAAGGAAGA
GCAGGCACGG AAGGTCTGTT ACTATACTGA TCTCTATTTT TCTCCTGCAA TTTTCATAAT ATCAAATTAT TTGTGATATT
GATATTATGT ACTGCATCAT GCCAGTACTA GTATCAGCTT TCTGTACAAT TTCTGATGTC AAGTTCACTA TTAGTTCAAT
GAAGTTGCTG GAATAGATGA CAAGGATATA TATGTTAATA AATATAGTGT ACCACTGAAT AAGCTTCTAG GGTTAAAAGT
TAAATCTATC AGTGCATTAG AGATACATTA GTTTCTTACT CAGTATTAAT CACAAAAATT GCAGATAACA TTATTTAAGC
ACTTTATCCA GAAAATGCAA ATACATTTGT AGTAACAAAA ACTCATTTGA TCATCGTAAA TGACATAAAT TTATAGTTCG
TTTTACGTAA GTAGTTTCCC ACTTTCTGTT TATAGTTCGT TTTACGTAAG TACTTTTTCT TTTGCTCTTA GTTCAGTCTA
ATGATTAAAT TAACAAATTG GTGCACTAAA GTAAATGTTA TTTATATGCA TATGGAGGAG TGTAGATGAT CTGAATACTT
TGATCTACGA AATCAATTGG TATGCTAAGT ACCTTCTCAA ATATAGTTGA CATCTTAATT ATATGTGCTG TAGGTGTGGG
AATCAGCCTC ACAAGTAGTA CGAGATGAGG AAGCAATGAA ACAAAAGCTA TGTGAAGACT TGAGTAATCT GGTAATTAGT
GTTAAATGAA GACATAATAT ACCCCTGTTT AGCTGGTTGT TTGACTGTGA CAATTTTATA CAGGTTCAAG AAAGCAGTAA
CTCTCAGTTT GCTCGGCTGG AGGAATTAAA AAGAAGATTG GAAGCTTTGA ATCCAAGTCG TGCATCAACT AATCTTTATC
ATGTAAGTAT TTTATCACTG TATTCATCAT TATTAATTAT ATAGTGGTGG CCCCTAAGGT ATGAACCTAA TTTTGGGGTG
TACGCTGCAC AGTGTCCTTA ATTAACAAAC TGTTTTCAGA ACTCCTAACT ATATGTCCTC CTAAACTTAT CAACAAGGAG
TCCCTTTGCT GGGAAACTGA TTATCTGCCA TTTGGAATTG AAATTTCTTG AGAATGTGAA CATGTGCTGA GAATGGAAAC
CTGCTTGCTT TTTCTGACTT CTCTACGGAA ATGTTTTTTT CACACCATGT TGTTAATGCT ACATTTCGTC GGTGTCGAGC
ACAATACACG CTTTTGCATA TGCATCTTCA TACTAAAGCA TTGAATGTTA AAATCGTGCA CATATTAGGA TGGGAGATCG
GCAGCTTCTT CTCAGGATAG TACACCCCAG CATGGTTCCT CTGTCCCCAA TGCAAAGGAG TCGAATGAGG GATCAACCGA
GAGCGTTTCC AACCAAAGTA ATTGTCAGAA AGCTGCAGCG AGAAATGGAC CTAATCAGCA GCCACATAAT GAAGGCGAAG
GAAGAAGTAA GAAGAAAGTC AACTTGCAAT CAAAAGGGAA GGGAATTGGT GTTGTGACCA AGGGTAGATC TTCAACTCCT
GGCTGGACTG GGGCTGGCTT CGATGTAGAT GGCAGAACCT GAGAGCACTA TACTATCGTA AGATATTACT GAACTAAATA
TTTTTTTGGG TGAGATGTCC ATGGTAGGTA CATATCCTTC CGTCCTTTGT TCTTGTTGCC CATTAACTTG GAAGTGTAAT
CTTCTTTCTC CCATTATATT ATTTCCGTGA CAGTTGGTTT AGCCATGAT

>Vigan.08G073700.01
GGCGACTCCG GCTAACGTGC TATGCACGTG CAAAAGATTG AATCATCCAT CCACGCTAAC TGAATCTGTA ACAGCGTGAC
ACAGGCCATC TCCGCTTTGG GTTCTTCAAA CCGCGTTTCT CTCGAACCGG ACGTCGTTGG ATACGGTCCA ACCGGGTTGA
AGCCGCTGCT TGGAAATCAC AGACCTGGAG GCGGCGGCAC ACGACGGATT TGTGGAATGC GAGTGATTGG ATTCCAAAAT
GACTTCGAAC CCTTCACTTC TCCCTGAGAT CGGACCTGAC GGTCTCGCTA AAGAAGCCCC CGTCATCAGC TACACAGAGA
AGATCATCGA AGCAGAACAG CTTCAATTGC AGAAATACAT TCAAGAAAAC TATTCTAAAA TTCGTGATGT GGAGCGTGAG
CTTGCAAATC TTTCACTGGA GATGAAACTT ACAGCTGGTC CGAAAAAAGC AGCACTTGAA CATTTGAGAA AGAAAATTGA
GACGTCAACA GAAAGAATCC GTGTGGCCAA GCTAAAGGAA GAGCAGGCAC GGAAGGTGTG GGAATCAGCC TCACAAGTAG
TACGAGATGA GGAAGCAATG AAACAAAAGC TATGTGAAGA CTTGAGTAAT CTGGTTCAAG AAAGCAGTAA CTCTCAGTTT
GCTCGGCTGG AGGAATTAAA AAGAAGATTG GAAGCTTTGA ATCCAAGTCG TGCATCAACT AATCTTTATC ATGATGGGAG
ATCGGCAGCT TCTTCTCAGG ATAGTACACC CCAGCATGGT TCCTCTGTCC CCAATGCAAA GGAGTCGAAT GAGGGATCAA
CCGAGAGCGT TTCCAACCAA AGTAATTGTC AGAAAGCTGC AGCGAGAAAT GGACCTAATC AGCAGCCACA TAATGAAGGC
GAAGGAAGAA GTAAGAAGAA AGTCAACTTG CAATCAAAAG GGAAGGGAAT TGGTGTTGTG ACCAAGGGTA GATCTTCAAC
TCCTGGCTGG ACTGGGGCTG GCTTCGATGT AGATGGCAGA ACCTGAGAGC ACTATACTAT CGTAAGATAT TACTGAACTA
AATATTTTTT TGGGTGAGAT GTCCATGGTA GGTACATATC CTTCCGTCCT TTGTTCTTGT TGCCCATTAA CTTGGAAGTG
TAATCTTCTT TCTCCCATTA TATTATTTCC GTGACAGTTG GTTTAGCCAT GAT

>Vigan.08G073700.01
ATGACTTCGA ACCCTTCACT TCTCCCTGAG ATCGGACCTG ACGGTCTCGC TAAAGAAGCC CCCGTCATCA GCTACACAGA
GAAGATCATC GAAGCAGAAC AGCTTCAATT GCAGAAATAC ATTCAAGAAA ACTATTCTAA AATTCGTGAT GTGGAGCGTG
AGCTTGCAAA TCTTTCACTG GAGATGAAAC TTACAGCTGG TCCGAAAAAA GCAGCACTTG AACATTTGAG AAAGAAAATT
GAGACGTCAA CAGAAAGAAT CCGTGTGGCC AAGCTAAAGG AAGAGCAGGC ACGGAAGGTG TGGGAATCAG CCTCACAAGT
AGTACGAGAT GAGGAAGCAA TGAAACAAAA GCTATGTGAA GACTTGAGTA ATCTGGTTCA AGAAAGCAGT AACTCTCAGT
TTGCTCGGCT GGAGGAATTA AAAAGAAGAT TGGAAGCTTT GAATCCAAGT CGTGCATCAA CTAATCTTTA TCATGATGGG
AGATCGGCAG CTTCTTCTCA GGATAGTACA CCCCAGCATG GTTCCTCTGT CCCCAATGCA AAGGAGTCGA ATGAGGGATC
AACCGAGAGC GTTTCCAACC AAAGTAATTG TCAGAAAGCT GCAGCGAGAA ATGGACCTAA TCAGCAGCCA CATAATGAAG
GCGAAGGAAG AAGTAAGAAG AAAGTCAACT TGCAATCAAA AGGGAAGGGA ATTGGTGTTG TGACCAAGGG TAGATCTTCA
ACTCCTGGCT GGACTGGGGC TGGCTTCGAT GTAGATGGCA GAACCTGA

>Vigan.08G073700.01
MTSNPSLLPE IGPDGLAKEA PVISYTEKII EAEQLQLQKY IQENYSKIRD VERELANLSL EMKLTAGPKK AALEHLRKKI
ETSTERIRVA KLKEEQARKV WESASQVVRD EEAMKQKLCE DLSNLVQESS NSQFARLEEL KRRLEALNPS RASTNLYHDG
RSAASSQDST PQHGSSVPNA KESNEGSTES VSNQSNCQKA AARNGPNQQP HNEGEGRSKK KVNLQSKGKG IGVVTKGRSS
TPGWTGAGFD VDGRT*