GBrowse Details

Vigan.08G058000.01

Basic Information:
Name: Vigan.08G058000.01
Multiple alignment
Variant Information
Position: Chr08:4441053..4444623 (+ strand)
Length: 3571
Functional Information:
Description: Similar to Uncharacterized protein. [K7LLC9, Glycine max]
InterPro: DnaJ domain (IPR001623)
DnaJ domain, conserved site (IPR018253)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:11.75,12.55,12.02,9.97,17.26,6.70,15.17,14.16
Arabidopsis thaliana homolog: AT1G61770.1
Automatic updates:
Name: NM_001255458 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max chaperone protein dnaJ 50-like (LOC100792705), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:4441053..4441123 (+ strand)
Length: 71
Type: five_prime_UTR
Position: Chr08:4441124..4441257 (+ strand)
Length: 134
Type: CDS
Position: Chr08:4441344..4441406 (+ strand)
Length: 63
Type: CDS
Position: Chr08:4441497..4441563 (+ strand)
Length: 67
Type: CDS
Position: Chr08:4441730..4441789 (+ strand)
Length: 60
Type: CDS
Position: Chr08:4441914..4441964 (+ strand)
Length: 51
Type: CDS
Position: Chr08:4442084..4442164 (+ strand)
Length: 81
Type: CDS
Position: Chr08:4442709..4442821 (+ strand)
Length: 113
Type: CDS
Position: Chr08:4443493..4443610 (+ strand)
Length: 118
Type: CDS
Position: Chr08:4443779..4443905 (+ strand)
Length: 127
Type: CDS
Position: Chr08:4444067..4444170 (+ strand)
Length: 104
Type: CDS
Position: Chr08:4444171..4444623 (+ strand)
Length: 453
Type: three_prime_UTR

>Vigan.08G058000.01 class=Sequence position=Chr08:4441053..4444623 (+ strand)
TTGGGGAGTT TGGGTCAACA GAGAGAAAGT AGGGAACAGA AGAAAAAGAA AGCCTCAACG TTTTCGGCGT CATGGATCCG
CTGCCGGCAG CGCTCCGGTG GCGCACGACC GCCATCCCAT TCCTCTTGGC GGTCCTCCTT TTATCCTCCG TCTACCCTTC
GCGCGCAATC TACTGCGACG AAGATGATTG CTACGATCTG CTTGGGTCAG CTAACATTCC TTTTCTTCCT TCAATTGTCT
TTAACCTAAG CTTTATTTCT CACTGTAACG TCCCCCTCTT CTCATTCGCA GGGTTTCTCA GAGTGCCAAT GCTTCCGAAA
TCAAGAAAGC TTACTACAAA CTCTCCTTGA AGCAGTACGT GTTTCTCCTC CTTTGCACTC TCTCTCTTAC TCTTTTTTTT
TTAATATAAT AACTACTTTT CCAATGGTTT CGTTTTTGAT TCAGTCATCC AGATAAGAAC CCTGATCCCG AATCGCGAAA
GCTGTTTGTT AAAATCGCCA ATGCTTACGA GGTGCTTTGG TGTTCTTGCT TTTTTTTTCC AATGATTTGG ATGTAGGAAT
ATGTATGTGT TAAAATTGAA CCTTGTGTAA TGCGGAGTAA ATTGAAAACT GACCACACTG ATCTATATTT GGTTAGGTGT
TGGTTCTGGT GCTAATGATA GTTATATAAC TTTACAGATT TTGAAGGACG AGGCCACGCG CGAACAATAT GATTATGCAA
TTGCACATCC AGAGGAGGTG TTTAGATTTT TTATAGAAAG TTTGGTTTAC TTTTAAATTT TGGGTCAATA TCCCTGATTT
TTCATCTCTG TTCTTTTAGT GTTTGTTGAA GTAGAGCTGT GTTTTCATCT GTTGATTTCA GGTGCTTTAT AATACTGCAC
GTTACTATCG GGCATACTAT GGTCACAAGA CGGTGAGATT TGTTGGTTTA CAATTTGAAT CCATGATGAA TTTTGGATAA
ATTTATTAGA AATTACTGAT TTTTGCAAGT AAGTCTCATT TTTAGTACTT ACGTACTTTT TTACCTGTCA GGATCCTCGA
GCTGTGTTGG TTGGCCTTCT TATTATTCTT TCAGGTTTTC AATATCTAAA TCAATCAACA AGGTATAATC AGGTATTGTG
ATATATTTAA TATCATATGA TGTATCATTA AACTCCCCTG ATGTGAAAAT GTACTATATG ATTGTGTAAT GTCAAAAATC
AGGAATAGTA GAGCTTTCTT ATGTTAAAGA TTGTATTTTG GTAGCCCACT AGGGTCATAT GGTGTTAGTT AGAGCCTTTG
GGTAGTTTGA ACTTCATTCC TACCATTGTA CACACAAAAA ACAGACTGTA CTTACTTGAC TTATGCCCAG TTATGGGTTT
TGGAAAATCT ATTAGCAAGG AGAAAGTAAG TAGGTCAAGA AGTCAAGAGT TGCCGGTCCC AAGTTTTAGG GTGAAAATTT
TCTGTTCCAT ACATGTCCTA TGAATCCAAT CATCACTGCC ACTAGAATGT TTTACCATGA TTTAGTCTTA GATGCATGCA
TAAGATTTAA AATAGGTCAG GGCTGTGCCA ATTTCTTTTG GTGGATATAT ATGACATTGT TTAGTTTGTT ATTTGTACAA
AGTGCTTTTG AAAAATTAAG ATATTTACGT TCATTGCACT ACTTTTCTGT GTTTAGGCTG TAGCCATGGT CAAGAAGACA
CCTGCATATA AAAATAAACT AAGGGCATTG GAACTTGAAC GCAGTGGAGG GATTACAAAC AAGAAGAAGA GTCAGAAGAA
TACGGTCAAG TAGGCCATCA TTCTCATTTT TTATGAGTCT GTATTTGTTT CAGGTTTTGC AAAATTATTC CCAGGAATAT
GAACTTTGGA ATATAATATT TCGGTGTTAA GTAAATATAA TATTTCTGTG TTAAGTTTTA AAAAATTTCC CTTACGTAGT
TGATTCCTAT GAATGAATTG TCTTCATAGT TTGCTTATAT TTCATTCCCG TGTGATTGTG GACGTCAGCA TATACTCCAA
CTAATTTCCC ACTTTATATA TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA
TATATATATA TATATATATA TATATATATA TATTTGATTG TTGAAAACAT TCATCAGGAT ATTCAAGCTT AACCAAACAT
GTCGTTTAGT TTGCGCAGGA ATGCTATTCT TGGGAATTTA AGTACATTGC CTTGATATAA ATTCCACCGA TATTAGTTGT
ACGTAATTTC CAAAAATGTT TTTCAGTTGC ACACCTATAT CTAGTATCCA GTGACCTGTT CAAATTGGTT CTCCACCTTG
AAAACTCTTA TTTCCTCTTT TAAATCAGTT TGTCTGTCAT CTGTAAGATT GTGCTTTGTT GACTGCGATT TCTTTACTTC
CGGCACACAA TGACACAATG TGGGGAATAT ATACATGCAG GAAAGTGGAG GAAGACCTTA GCAATGAACT CGACCTGCAG
ATAACTGGAG CTGAAAGGGC CTCTGTGTGG AAACTTCTTG CTGTCCGCTT TGTTCTATTA CCTTATACCT TAGGCAAGGT
TAGAGTTCAA TCTTTATCTA GAAAATGCAG TTACTACTGT GAATCTTTCA TTCTCTATTT TAATTCAAGG TAGCATATAT
GAATTTCTGT AGCACGAGTA GTGCTGAATC TTGAAAATTA ATATTTTAGC ATGTGAAATT TACTGATGAA TTCTGTTTCC
ATTCAGCTGC TACTGTGGTC TGCCTGCTGG TTTTGGAGAT ACAGAGTGAA GAAAAACTCT TATTCTTGGG AGGATGCTTC
TTATCTGACA CAACGATCCC TTGGTATTCC TCTCGATAGA TGGAGACATA TTGGTAAATT ATATTATCTA CGATGAACCT
TCTTTTAGAC ACCATGGACA TAGGGGAAGG GAATTATGTG TAGTTTTTTT GGTTTACTTG TTTTGGATTC TACTAGGTGG
CCTAACCTAC TACTATGCAT ATTAATGGTT CTTATTTGGT GCTGTTATTA ATAGATGAAG CAACAAAGGA AGATCTTGTG
CTCAAACGCT TATGGGAGAA ATCGAATATG GAGAGCTATG TAGCAGAGAT GCGGAAAGAA TCAAAACGCA GAAGATAGCT
GCATTAGTGG CCTCGTCTGC TGCATTTAAA GTTCTAAATT TGGTTTGAAT TATGAAATTG AACTGAACGA CGAAGTGACA
ATTAAAGTTA AAATTGGAAA GCTGCTAATT GATTTGGAGG AGGAGGGGTG ATAGAAGCAG AATTATTCAT TTCAACCACG
AAATCGTGGA GTCATAAACA AAGTTTAGTG AGTTTAAACA TGTCTCTGAC AGCCTGTAAA CAGTGAACAC TAAAGAATAC
CGCATTCATT TTATTTTATT TTTTTGTTTC AAAGTCAGGT ATTTAAGCCT CACTCCCTCT AGAATCGGAT GTTCGGTAGT
GGTTTTGTGC AACAATTTTA ATGACATTAT ATGAATTCTC GGCATGTTAC AGTAGAGTTT TGACTTAATG TATGTGTCTG
AAATTGTTAT CCTTCCACTC TTCCTGTCGT AGTATATCGC GACTAGCGTT G

>Vigan.08G058000.01
TTGGGGAGTT TGGGTCAACA GAGAGAAAGT AGGGAACAGA AGAAAAAGAA AGCCTCAACG TTTTCGGCGT CATGGATCCG
CTGCCGGCAG CGCTCCGGTG GCGCACGACC GCCATCCCAT TCCTCTTGGC GGTCCTCCTT TTATCCTCCG TCTACCCTTC
GCGCGCAATC TACTGCGACG AAGATGATTG CTACGATCTG CTTGGGGTTT CTCAGAGTGC CAATGCTTCC GAAATCAAGA
AAGCTTACTA CAAACTCTCC TTGAAGCATC ATCCAGATAA GAACCCTGAT CCCGAATCGC GAAAGCTGTT TGTTAAAATC
GCCAATGCTT ACGAGATTTT GAAGGACGAG GCCACGCGCG AACAATATGA TTATGCAATT GCACATCCAG AGGAGGTGCT
TTATAATACT GCACGTTACT ATCGGGCATA CTATGGTCAC AAGACGGATC CTCGAGCTGT GTTGGTTGGC CTTCTTATTA
TTCTTTCAGG TTTTCAATAT CTAAATCAAT CAACAAGGTA TAATCAGGCT GTAGCCATGG TCAAGAAGAC ACCTGCATAT
AAAAATAAAC TAAGGGCATT GGAACTTGAA CGCAGTGGAG GGATTACAAA CAAGAAGAAG AGTCAGAAGA ATACGGTCAA
GAAAGTGGAG GAAGACCTTA GCAATGAACT CGACCTGCAG ATAACTGGAG CTGAAAGGGC CTCTGTGTGG AAACTTCTTG
CTGTCCGCTT TGTTCTATTA CCTTATACCT TAGGCAAGCT GCTACTGTGG TCTGCCTGCT GGTTTTGGAG ATACAGAGTG
AAGAAAAACT CTTATTCTTG GGAGGATGCT TCTTATCTGA CACAACGATC CCTTGGTATT CCTCTCGATA GATGGAGACA
TATTGATGAA GCAACAAAGG AAGATCTTGT GCTCAAACGC TTATGGGAGA AATCGAATAT GGAGAGCTAT GTAGCAGAGA
TGCGGAAAGA ATCAAAACGC AGAAGATAGC TGCATTAGTG GCCTCGTCTG CTGCATTTAA AGTTCTAAAT TTGGTTTGAA
TTATGAAATT GAACTGAACG ACGAAGTGAC AATTAAAGTT AAAATTGGAA AGCTGCTAAT TGATTTGGAG GAGGAGGGGT
GATAGAAGCA GAATTATTCA TTTCAACCAC GAAATCGTGG AGTCATAAAC AAAGTTTAGT GAGTTTAAAC ATGTCTCTGA
CAGCCTGTAA ACAGTGAACA CTAAAGAATA CCGCATTCAT TTTATTTTAT TTTTTTGTTT CAAAGTCAGG TATTTAAGCC
TCACTCCCTC TAGAATCGGA TGTTCGGTAG TGGTTTTGTG CAACAATTTT AATGACATTA TATGAATTCT CGGCATGTTA
CAGTAGAGTT TTGACTTAAT GTATGTGTCT GAAATTGTTA TCCTTCCACT CTTCCTGTCG TAGTATATCG CGACTAGCGT
TG

>Vigan.08G058000.01
ATGGATCCGC TGCCGGCAGC GCTCCGGTGG CGCACGACCG CCATCCCATT CCTCTTGGCG GTCCTCCTTT TATCCTCCGT
CTACCCTTCG CGCGCAATCT ACTGCGACGA AGATGATTGC TACGATCTGC TTGGGGTTTC TCAGAGTGCC AATGCTTCCG
AAATCAAGAA AGCTTACTAC AAACTCTCCT TGAAGCATCA TCCAGATAAG AACCCTGATC CCGAATCGCG AAAGCTGTTT
GTTAAAATCG CCAATGCTTA CGAGATTTTG AAGGACGAGG CCACGCGCGA ACAATATGAT TATGCAATTG CACATCCAGA
GGAGGTGCTT TATAATACTG CACGTTACTA TCGGGCATAC TATGGTCACA AGACGGATCC TCGAGCTGTG TTGGTTGGCC
TTCTTATTAT TCTTTCAGGT TTTCAATATC TAAATCAATC AACAAGGTAT AATCAGGCTG TAGCCATGGT CAAGAAGACA
CCTGCATATA AAAATAAACT AAGGGCATTG GAACTTGAAC GCAGTGGAGG GATTACAAAC AAGAAGAAGA GTCAGAAGAA
TACGGTCAAG AAAGTGGAGG AAGACCTTAG CAATGAACTC GACCTGCAGA TAACTGGAGC TGAAAGGGCC TCTGTGTGGA
AACTTCTTGC TGTCCGCTTT GTTCTATTAC CTTATACCTT AGGCAAGCTG CTACTGTGGT CTGCCTGCTG GTTTTGGAGA
TACAGAGTGA AGAAAAACTC TTATTCTTGG GAGGATGCTT CTTATCTGAC ACAACGATCC CTTGGTATTC CTCTCGATAG
ATGGAGACAT ATTGATGAAG CAACAAAGGA AGATCTTGTG CTCAAACGCT TATGGGAGAA ATCGAATATG GAGAGCTATG
TAGCAGAGAT GCGGAAAGAA TCAAAACGCA GAAGATAG

>Vigan.08G058000.01
MDPLPAALRW RTTAIPFLLA VLLLSSVYPS RAIYCDEDDC YDLLGVSQSA NASEIKKAYY KLSLKHHPDK NPDPESRKLF
VKIANAYEIL KDEATREQYD YAIAHPEEVL YNTARYYRAY YGHKTDPRAV LVGLLIILSG FQYLNQSTRY NQAVAMVKKT
PAYKNKLRAL ELERSGGITN KKKSQKNTVK KVEEDLSNEL DLQITGAERA SVWKLLAVRF VLLPYTLGKL LLWSACWFWR
YRVKKNSYSW EDASYLTQRS LGIPLDRWRH IDEATKEDLV LKRLWEKSNM ESYVAEMRKE SKRRR*