GBrowse Details

Vigan.08G037400.01

Basic Information:
Name: Vigan.08G037400.01
Multiple alignment
Variant Information
Position: Chr08:3013422..3016723 (+ strand)
Length: 3302
Functional Information:
Description: Similar to Fructose-bisphosphate aldolase. [I1NFR3, Glycine max]
GO: Biological Process: glycolysis (GO:0006096)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332)
InterPro: Fructose-bisphosphate aldolase, class-I (IPR000741)
Aldolase-type TIM barrel (IPR013785)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:261.88,36.07,44.55,18.87,72.23,105.81,80.11,36.89
Arabidopsis thaliana homolog: AT2G01140.1, AT2G21330.1, AT4G38970.1
Automatic updates:
Name: NM_001255243 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative fructose-bisphosphate aldolase 3, chloroplastic (LOC100786504), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:3013422..3013614 (+ strand)
Length: 193
Type: five_prime_UTR
Position: Chr08:3013615..3013761 (+ strand)
Length: 147
Type: CDS
Position: Chr08:3014546..3014815 (+ strand)
Length: 270
Type: CDS
Position: Chr08:3014909..3015018 (+ strand)
Length: 110
Type: CDS
Position: Chr08:3015098..3015188 (+ strand)
Length: 91
Type: CDS
Position: Chr08:3015519..3015788 (+ strand)
Length: 270
Type: CDS
Position: Chr08:3015906..3016184 (+ strand)
Length: 279
Type: CDS
Position: Chr08:3016185..3016723 (+ strand)
Length: 539
Type: three_prime_UTR

>Vigan.08G037400.01 class=Sequence position=Chr08:3013422..3016723 (+ strand)
GGTTGTTGAT ATTGCCGCTT GAGAAGTGTC TCACATCACC TACCGCGGAG TGACCAAGAA AACCAAAACG AATCAAACCA
AACACTTCAT TTCTTTTTCA CGGTTTTCTC TTTCCCTATA AAACCTTCAG ATCACAACAC AGCACAATCT TCACTGGACT
TTGCAACAAT CCATTTTTTC ACTCTTAACA TCCATGGCTA TGGCTTCTGC AAAGCTCAAT ACTTTGTCTT CACAGTGGAT
CGCCCACAGC ACCTTTTCTC CACGCCGGGG ATCTTCTCCT CGCCGGGTCT CTCTCCCGAT CCGCGCCTCT TCTTACCAAC
ACGAACTCGT CCAAACTGCT GTTAGTACCA ATTCTTTATG ATATCTTCTT CTTTCTTGCC CTTTATCAAT TCTTTTGATT
TCCAAAGTTT TTCTGTTCTG AAGGTTTTAA CTTTGCTGTT TTTCGGTACA CCCTTTGTGC ATGCGTATTT TCCGTCTTTG
GTCGTGTTTG TTTGTAGATT TATATTAATT CGATTCAATT TAAATGTTCT AAAAGTTTTA AAGGGTTAAT CTCCAGACAA
TGTTGATTCA AAATTGCATA TATCAGTTTT GAAGAAATGT ACCCGCTGGC TTTTGGAAAT GTATCTGACA ATATAAGAAA
TAAATAAAAA AATAGCAATA CCCTATCTAA CATTAAGCGA ACCAATCTAA ATGGTAAGAT CTTTTAAAAC GGAATACCGT
CTATTTATGA TTTATTGACT TTGCCGCATA TTCTTCAAGC ACATTCTTCA AATCGCGATT AGTATCTTCT TCTTTCTTGC
ACTTTATCAA TTATTTTGAT TTCTAATGTT TTTCTGCTCT AAAGATTTTA ACTTTGTTGT TTTTTGGTAC ACTCTTTATG
CATGTGCATT TTCCATCTTT GGTCGTGTTT GTTGATTTAC ATTAATTTGA TTCATAACTT ACTCTGTAAT GAAATCTCTC
CTTGGATTTG GTTTTTTAGT ATTTTTTTAC TTGGAAGATT TTCAGGATGC TGTTTTTCTA TGTTGATTTG GATTGTCTTT
TAGATACGTT TTATCACTCT ATCACTTTGG ATCTTAACCC TTCAGTAAAG ATGAGACTGG CTTTCTTGTT TGTTGGTTGT
ATAGAAATCT ATTGCAACTC CTGGGCGTGG AATTCTTGCA ATTGATGAAT CAAATGCAAC ATGCGGGAAG CGTTTAGCAT
CCATTGGTTT GGACAATACT GAGGTGAATC GCCAGGCTTA CAGGCAACTT CTGCTTACCA CACCTGGCCT TGGAGAGTAT
ATTTCTGGTG CCATTCTTTT TGAAGAAACC CTTTACCAGT CAACCACTGA TGGAAAGAAA TTTGTGGATT GCCTTCGTGA
TCAGAACATT GTTCCTGGCA TCAAAGTTGA TAAGGTTTGT TATTTGAGTT TGTCAATGGT GTCATGTGTT ACTGATTAGA
TTTAGAAGTT GGCTTGGTGT TTACATTTAT AGTTTTCCTA TTTTTAGGGT CTGGTCCCCC TGCCGGGTTC AAACAATGAA
TCATGGTGCC AAGGGTTGGA TGGATTGGCT TCTAGGTCTG CTGAATACTA CAAGCAAGGT GCTCGATTTG CCAAGTGGTA
AGTCATTGTT TCTTTGTGAA ATGTTCGTCT TAATTAGATG CATTGAGAGC GACTTTAAAA TTGTTTTGAT CCACAGGAGG
ACAGTTGTTA GCATTCCATG TGGTCCTTCT GCATTAGCTG TTAAGGAAGC AGCATGGGGA CTTGCACGTT ATGCCGCTAT
CTCTCAGGTA TTCTTGCTCC CATAAATCTT TGTTTGCTGA AATTACCCGA TTCTTAGAGT AACACATCTA TTTGTAGTTT
ATCCTTTGGT ATCGATCACT GGACCCATGG ATGATAGTGG TTCTTTTCAT TTGAAGGGAG TGAACTTGGG TTGTGGGTTT
AGTTTGGTCT ATGACAAAGG GAACAGATAT TTTATGCAAA TTTGAATGAA TGAGAACCTG TAATTGTTTT TTCATTCTTT
GAACTTTTGT TACTTGATGT TGTTGTAGAT TTATCTCAAG AAAGGTTTTT CTTTTACAGT GCACTAATCC CCTTGCTTTA
CTCGTTCTTC ATTGCAGGAC AATGGCCTTG TGCCAATTGT GGAGCCTGAA ATTCTTCTGG ACGGAGACCA CTCAATTGAA
AGGACGTTGG AAGTTGCCGA GAAAGTCTGG TCTGAAGTCT TCTTCTACTT GGCTGAAAAC AATGTCATGT TTGAGGGAAT
TTTGCTCAAA CCTAGCATGG TTACACCTGG GGCTGGACAT AAGGAAAAGG CTTCTCCGGA AACCGTTGCC AAATATACTC
TAACCTTGCT TAGAAGAAGA GTTCCTCCAG CAGTACCCGG AATCATGGTA AAGTAACAGG TCTTTTGTAT TCTCTATTCA
GATAATTGGC TATGCTGATT TTACTTATTA TTGCACTTAA TATAAAACTA GTAAATTAAA GAGTGAAAAT GTTTATTTTG
TCAGTTTTTG TCGGGTGGAC AATCTGAAGT GGAAGCGACA CTTAATCTAA ATGCAATGAA CCAAAGCCCC AACCCATGGC
ATGTTTCTTT CTCGTATGCT CGAGCTCTTC AGAACACCGT GCTAAAGACG TGGAAAGGAC ACCCTGAGAA TGTGGAAGCT
GCTCAAAAGT CTCTTTTGGT GCGCGCAAAA GCAAACTCCT TGGCTCAACT TGGAAGATAT TCTGCGGAGG GTGAGAGTGA
AGAGGCAAAG AAGGGAATGT TTGTCAAGGG CTATGTCTAC TAATTTCTTT AGCTTTTTAT CATTCCTTCT TTGCAGTGAT
CGTGAAGGGA CTTAGATGTG TTTTAGTTTT TTTTTTCTAC TTCTAGCATG AGTCTGAATA AATTGAAGCT AGAAAGAAAG
GTTTTCTTGG TAAAATGAAT GGGTATTAGT AAAAAACCTA AAAAACCCAG ACGAGGGAAA AAGAACAGTT TATTACTTGG
TTATTGTTTA TTTGGCTGTT CACAGATTTT GTTCTGGTAG TGTGCAGTAT GTGATTGGGA ATATCATTCG CATATTTAAT
CCGCATTTGT GTGTGCCATA TTTATGAAGT ATTGAAAAAA TGATATAATC AGAATAAGCC TTTTATAGTA AGTCTTTCCT
GATGAGCGAT ATGAAGTTGA TATTCTGCAT TTGCCCATGG TATTGACTAG TTTTTGTCCT GTGCTAGTGT TTAAGTTTTC
TAACCATAAA TCATTGGCTG GGTATACGTT ATGCATATAT ACTTTTGATT AATTTTAGTA GGAAAACTGC ATTTTTTTGT
CCAAATAAAA TTTTAATTGT AA

>Vigan.08G037400.01
GGTTGTTGAT ATTGCCGCTT GAGAAGTGTC TCACATCACC TACCGCGGAG TGACCAAGAA AACCAAAACG AATCAAACCA
AACACTTCAT TTCTTTTTCA CGGTTTTCTC TTTCCCTATA AAACCTTCAG ATCACAACAC AGCACAATCT TCACTGGACT
TTGCAACAAT CCATTTTTTC ACTCTTAACA TCCATGGCTA TGGCTTCTGC AAAGCTCAAT ACTTTGTCTT CACAGTGGAT
CGCCCACAGC ACCTTTTCTC CACGCCGGGG ATCTTCTCCT CGCCGGGTCT CTCTCCCGAT CCGCGCCTCT TCTTACCAAC
ACGAACTCGT CCAAACTGCT AAATCTATTG CAACTCCTGG GCGTGGAATT CTTGCAATTG ATGAATCAAA TGCAACATGC
GGGAAGCGTT TAGCATCCAT TGGTTTGGAC AATACTGAGG TGAATCGCCA GGCTTACAGG CAACTTCTGC TTACCACACC
TGGCCTTGGA GAGTATATTT CTGGTGCCAT TCTTTTTGAA GAAACCCTTT ACCAGTCAAC CACTGATGGA AAGAAATTTG
TGGATTGCCT TCGTGATCAG AACATTGTTC CTGGCATCAA AGTTGATAAG GGTCTGGTCC CCCTGCCGGG TTCAAACAAT
GAATCATGGT GCCAAGGGTT GGATGGATTG GCTTCTAGGT CTGCTGAATA CTACAAGCAA GGTGCTCGAT TTGCCAAGTG
GAGGACAGTT GTTAGCATTC CATGTGGTCC TTCTGCATTA GCTGTTAAGG AAGCAGCATG GGGACTTGCA CGTTATGCCG
CTATCTCTCA GGACAATGGC CTTGTGCCAA TTGTGGAGCC TGAAATTCTT CTGGACGGAG ACCACTCAAT TGAAAGGACG
TTGGAAGTTG CCGAGAAAGT CTGGTCTGAA GTCTTCTTCT ACTTGGCTGA AAACAATGTC ATGTTTGAGG GAATTTTGCT
CAAACCTAGC ATGGTTACAC CTGGGGCTGG ACATAAGGAA AAGGCTTCTC CGGAAACCGT TGCCAAATAT ACTCTAACCT
TGCTTAGAAG AAGAGTTCCT CCAGCAGTAC CCGGAATCAT GTTTTTGTCG GGTGGACAAT CTGAAGTGGA AGCGACACTT
AATCTAAATG CAATGAACCA AAGCCCCAAC CCATGGCATG TTTCTTTCTC GTATGCTCGA GCTCTTCAGA ACACCGTGCT
AAAGACGTGG AAAGGACACC CTGAGAATGT GGAAGCTGCT CAAAAGTCTC TTTTGGTGCG CGCAAAAGCA AACTCCTTGG
CTCAACTTGG AAGATATTCT GCGGAGGGTG AGAGTGAAGA GGCAAAGAAG GGAATGTTTG TCAAGGGCTA TGTCTACTAA
TTTCTTTAGC TTTTTATCAT TCCTTCTTTG CAGTGATCGT GAAGGGACTT AGATGTGTTT TAGTTTTTTT TTTCTACTTC
TAGCATGAGT CTGAATAAAT TGAAGCTAGA AAGAAAGGTT TTCTTGGTAA AATGAATGGG TATTAGTAAA AAACCTAAAA
AACCCAGACG AGGGAAAAAG AACAGTTTAT TACTTGGTTA TTGTTTATTT GGCTGTTCAC AGATTTTGTT CTGGTAGTGT
GCAGTATGTG ATTGGGAATA TCATTCGCAT ATTTAATCCG CATTTGTGTG TGCCATATTT ATGAAGTATT GAAAAAATGA
TATAATCAGA ATAAGCCTTT TATAGTAAGT CTTTCCTGAT GAGCGATATG AAGTTGATAT TCTGCATTTG CCCATGGTAT
TGACTAGTTT TTGTCCTGTG CTAGTGTTTA AGTTTTCTAA CCATAAATCA TTGGCTGGGT ATACGTTATG CATATATACT
TTTGATTAAT TTTAGTAGGA AAACTGCATT TTTTTGTCCA AATAAAATTT TAATTGTAA

>Vigan.08G037400.01
ATGGCTATGG CTTCTGCAAA GCTCAATACT TTGTCTTCAC AGTGGATCGC CCACAGCACC TTTTCTCCAC GCCGGGGATC
TTCTCCTCGC CGGGTCTCTC TCCCGATCCG CGCCTCTTCT TACCAACACG AACTCGTCCA AACTGCTAAA TCTATTGCAA
CTCCTGGGCG TGGAATTCTT GCAATTGATG AATCAAATGC AACATGCGGG AAGCGTTTAG CATCCATTGG TTTGGACAAT
ACTGAGGTGA ATCGCCAGGC TTACAGGCAA CTTCTGCTTA CCACACCTGG CCTTGGAGAG TATATTTCTG GTGCCATTCT
TTTTGAAGAA ACCCTTTACC AGTCAACCAC TGATGGAAAG AAATTTGTGG ATTGCCTTCG TGATCAGAAC ATTGTTCCTG
GCATCAAAGT TGATAAGGGT CTGGTCCCCC TGCCGGGTTC AAACAATGAA TCATGGTGCC AAGGGTTGGA TGGATTGGCT
TCTAGGTCTG CTGAATACTA CAAGCAAGGT GCTCGATTTG CCAAGTGGAG GACAGTTGTT AGCATTCCAT GTGGTCCTTC
TGCATTAGCT GTTAAGGAAG CAGCATGGGG ACTTGCACGT TATGCCGCTA TCTCTCAGGA CAATGGCCTT GTGCCAATTG
TGGAGCCTGA AATTCTTCTG GACGGAGACC ACTCAATTGA AAGGACGTTG GAAGTTGCCG AGAAAGTCTG GTCTGAAGTC
TTCTTCTACT TGGCTGAAAA CAATGTCATG TTTGAGGGAA TTTTGCTCAA ACCTAGCATG GTTACACCTG GGGCTGGACA
TAAGGAAAAG GCTTCTCCGG AAACCGTTGC CAAATATACT CTAACCTTGC TTAGAAGAAG AGTTCCTCCA GCAGTACCCG
GAATCATGTT TTTGTCGGGT GGACAATCTG AAGTGGAAGC GACACTTAAT CTAAATGCAA TGAACCAAAG CCCCAACCCA
TGGCATGTTT CTTTCTCGTA TGCTCGAGCT CTTCAGAACA CCGTGCTAAA GACGTGGAAA GGACACCCTG AGAATGTGGA
AGCTGCTCAA AAGTCTCTTT TGGTGCGCGC AAAAGCAAAC TCCTTGGCTC AACTTGGAAG ATATTCTGCG GAGGGTGAGA
GTGAAGAGGC AAAGAAGGGA ATGTTTGTCA AGGGCTATGT CTACTAA

>Vigan.08G037400.01
MAMASAKLNT LSSQWIAHST FSPRRGSSPR RVSLPIRASS YQHELVQTAK SIATPGRGIL AIDESNATCG KRLASIGLDN
TEVNRQAYRQ LLLTTPGLGE YISGAILFEE TLYQSTTDGK KFVDCLRDQN IVPGIKVDKG LVPLPGSNNE SWCQGLDGLA
SRSAEYYKQG ARFAKWRTVV SIPCGPSALA VKEAAWGLAR YAAISQDNGL VPIVEPEILL DGDHSIERTL EVAEKVWSEV
FFYLAENNVM FEGILLKPSM VTPGAGHKEK ASPETVAKYT LTLLRRRVPP AVPGIMFLSG GQSEVEATLN LNAMNQSPNP
WHVSFSYARA LQNTVLKTWK GHPENVEAAQ KSLLVRAKAN SLAQLGRYSA EGESEEAKKG MFVKGYVY*