GBrowse Details

Vigan.08G028000.01

Basic Information:
Name: Vigan.08G028000.01
Multiple alignment
Variant Information
Position: Chr08:2161349..2163446 (- strand)
Length: 2098
Functional Information:
Description: Similar to Uncharacterized protein. [I1NFH1, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
Molecular Function: heme binding (GO:0020037)
InterPro: Cytochrome P450 (IPR001128)
Cytochrome P450, E-class, group I (IPR002401)
Cytochrome P450, conserved site (IPR017972)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.02,0.58,0.14,218.17,0.74,78.57,1.47
Arabidopsis thaliana homolog: AT2G30490.1
Automatic updates:
Name: Y09449 NCBI(nuccore)
Organism: Phaseolus vulgaris
Description: P.vulgaris mRNA for cinnamate 4-hydroxylase, partial.
PubMed ID: 10380796 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr08:2161349..2161585 (- strand)
Length: 237
Type: three_prime_UTR
Position: Chr08:2161586..2162321 (- strand)
Length: 736
Type: CDS
Position: Chr08:2162542..2163419 (- strand)
Length: 878
Type: CDS
Position: Chr08:2163420..2163446 (- strand)
Length: 27
Type: five_prime_UTR

>Vigan.08G028000.01 class=Sequence position=Chr08:2161349..2163446 (- strand)
ATTAACTTTA ATCCTACAAA CACAAACATG AGTTTTCAAA TCAAGAAACC AATATTTTCA GCCCTCGTAT CAGTATTACT
CATTTCAATT ACAAAACTCT TCCATTCTTA TTTCTCAATA CCATTCTCAC CATTCAATGT TTCCATTCCT ATTGCCACGA
CCCTTTCTGT TCTAATCATA TGCAAATTTT TCTTAACTTC TAAAACCCAC TCTTCCACTC CCCCTGGTCC TCTATCAGTT
CCTATATTTG GTAACTGGTT GCAAGTTGGC AACGATCTCA ACCACCGTCT TCTAGCGTCA ATGTCACAGA CCTATGGTCC
TGTGTTCCTA CTCAAACTAG GTTCCAAAAA CTTGGTTGTG GTCTCTGATC CCGAGCTCGC CACCCAAGTG CTCCATTCAC
AAGGTGTGGA ATTTGGCTCG CGCCCACGAA ATGTTGTGTT TGATATCTTC ACTGGGAACG GCCAAGACAT GGTTTTCACT
GTTTATGGTG ACCACTGGCG CAAAATGCGC AGAATCATGA CGCTGCCATT CTTCACCAAC AAGGTTGTCC ACAACTACAG
CAGCATGTGG GAGGAGGAGA TGGACCTGGT GGTGCGTGAC CTCAACCTGA ATGAGAGAGT GAGGAGCGAA GGCATTGTTA
TCAGAAAGCG GCTTCAGTTG ATGCTATACA ATATCATGTA TAGGATGATG TTTGACGCCA AGTTTGAGTC ACAAGAGGAC
CCTTTGTTCA TTCAGGCCAC GAGGTTTAAC TCCGAGAGAA GCCGTTTGGC ACAGAGTTTT GAATACAATT ATGGGGATTT
TATACCATTG CTCAGGCCGT TCTTGAGGGG GTACCTAAAC AAGTGCAAGG ACTTGCAATC TAGGAGGCTT GCATTTTTCA
ACACCCACTA CGTTGAGAAA AGAAGGTAAT TAATATATTT ATCAGCCTCA AGTTTTGATA TAGGAAACAC TGAATTTACT
CTCCCAAAGA TACAACATCC ATCCCATTTA GACAAATTAC TATATAGTCT TCAAGATAAT ACTTACGATT CTATATCCAA
CATGGTTGAC ATATATAAAT TCCATTTGAT AACTTCTTTA TATTCTGTTT ATAATGCGAG TATTTGCTGG TGTATTGCTC
TGCAGACAAA TAATGGCTGC CAACGGGGAG AAACACAAGA TCAGCTGTGC TATTGATCAC ATCATAGATG CACAGATGAA
GGGAGAAATC AGTGAAGAGA ATGTGATATA TATAGTAGAA AACATCAACG TTGCAGCAAT CGAGACAACA TTATGGTCCA
TGGAATGGGC AATAGCAGAG TTGGTTAATC ATCCAAGCGT TCAAAAGAAG ATACGTGATG AGATATCAGA AGTGCTTAAA
GGGGAGCCAG TGACGGAATC CAACCTACAC GAGCTCCCAT ACTTACAAGC AACTGTGAAA GAAACACTGA GACTTCACAC
CCCGATTCCT CTCTTGGTGC CCCACATGAA CCTGGAAGAA GCAAAGTTAG GAGGGTACAC TATACCAAAG GAGTCCAAGG
TGGTGGTGAA TGCTTGGTGG CTTGCGAACA ACCCATCATG GTGGAAGAAT CCAGAGGAGT TCAGGCCAGA AAGGTTTTTG
CAAGAGGAGT GTGCAACAGA TGCTGTTGCT GGAGGAAAGG TTGATTTTAG GTTCGTGCCA TTTGGTGTGG GGAGGAGGAG
TTGCCCTGGA ATCATACTTG CATTACCAAT ACTTGGACTT GTGATAGCAA AAATGGTGTC AAATTTTGAG CTGAGTGCTC
CAAAAGGGAC AAAGATAGAT GTAAGTGAAA AAGGAGGGCA ATTCAGCTTG CACATTGCCA ACCACTCCAC TGTCTTGTTC
CATCCAATTA GAACCCTGTG ATTTCAGTCC CAACAAGCAC TTGGCTTATC AACAGTTCTT AAATCTACAG TTGCTTAATT
TCCAAGAAGC ATTTGTCTTT CTTTCTACTT CAATTGTATA CACTATAGTG CCTGCAATGT TCCTCCATAA GACAGTTTGA
ATCTGTTGTT GTTCTTATCA CTATTCAAAA GTATAAAACA TTTTTTTTGT AACCTGTCAT ATATAACTTT GTTCCTTTTT
TGTAACATTT TTCTGCAG

>Vigan.08G028000.01
ATTAACTTTA ATCCTACAAA CACAAACATG AGTTTTCAAA TCAAGAAACC AATATTTTCA GCCCTCGTAT CAGTATTACT
CATTTCAATT ACAAAACTCT TCCATTCTTA TTTCTCAATA CCATTCTCAC CATTCAATGT TTCCATTCCT ATTGCCACGA
CCCTTTCTGT TCTAATCATA TGCAAATTTT TCTTAACTTC TAAAACCCAC TCTTCCACTC CCCCTGGTCC TCTATCAGTT
CCTATATTTG GTAACTGGTT GCAAGTTGGC AACGATCTCA ACCACCGTCT TCTAGCGTCA ATGTCACAGA CCTATGGTCC
TGTGTTCCTA CTCAAACTAG GTTCCAAAAA CTTGGTTGTG GTCTCTGATC CCGAGCTCGC CACCCAAGTG CTCCATTCAC
AAGGTGTGGA ATTTGGCTCG CGCCCACGAA ATGTTGTGTT TGATATCTTC ACTGGGAACG GCCAAGACAT GGTTTTCACT
GTTTATGGTG ACCACTGGCG CAAAATGCGC AGAATCATGA CGCTGCCATT CTTCACCAAC AAGGTTGTCC ACAACTACAG
CAGCATGTGG GAGGAGGAGA TGGACCTGGT GGTGCGTGAC CTCAACCTGA ATGAGAGAGT GAGGAGCGAA GGCATTGTTA
TCAGAAAGCG GCTTCAGTTG ATGCTATACA ATATCATGTA TAGGATGATG TTTGACGCCA AGTTTGAGTC ACAAGAGGAC
CCTTTGTTCA TTCAGGCCAC GAGGTTTAAC TCCGAGAGAA GCCGTTTGGC ACAGAGTTTT GAATACAATT ATGGGGATTT
TATACCATTG CTCAGGCCGT TCTTGAGGGG GTACCTAAAC AAGTGCAAGG ACTTGCAATC TAGGAGGCTT GCATTTTTCA
ACACCCACTA CGTTGAGAAA AGAAGACAAA TAATGGCTGC CAACGGGGAG AAACACAAGA TCAGCTGTGC TATTGATCAC
ATCATAGATG CACAGATGAA GGGAGAAATC AGTGAAGAGA ATGTGATATA TATAGTAGAA AACATCAACG TTGCAGCAAT
CGAGACAACA TTATGGTCCA TGGAATGGGC AATAGCAGAG TTGGTTAATC ATCCAAGCGT TCAAAAGAAG ATACGTGATG
AGATATCAGA AGTGCTTAAA GGGGAGCCAG TGACGGAATC CAACCTACAC GAGCTCCCAT ACTTACAAGC AACTGTGAAA
GAAACACTGA GACTTCACAC CCCGATTCCT CTCTTGGTGC CCCACATGAA CCTGGAAGAA GCAAAGTTAG GAGGGTACAC
TATACCAAAG GAGTCCAAGG TGGTGGTGAA TGCTTGGTGG CTTGCGAACA ACCCATCATG GTGGAAGAAT CCAGAGGAGT
TCAGGCCAGA AAGGTTTTTG CAAGAGGAGT GTGCAACAGA TGCTGTTGCT GGAGGAAAGG TTGATTTTAG GTTCGTGCCA
TTTGGTGTGG GGAGGAGGAG TTGCCCTGGA ATCATACTTG CATTACCAAT ACTTGGACTT GTGATAGCAA AAATGGTGTC
AAATTTTGAG CTGAGTGCTC CAAAAGGGAC AAAGATAGAT GTAAGTGAAA AAGGAGGGCA ATTCAGCTTG CACATTGCCA
ACCACTCCAC TGTCTTGTTC CATCCAATTA GAACCCTGTG ATTTCAGTCC CAACAAGCAC TTGGCTTATC AACAGTTCTT
AAATCTACAG TTGCTTAATT TCCAAGAAGC ATTTGTCTTT CTTTCTACTT CAATTGTATA CACTATAGTG CCTGCAATGT
TCCTCCATAA GACAGTTTGA ATCTGTTGTT GTTCTTATCA CTATTCAAAA GTATAAAACA TTTTTTTTGT AACCTGTCAT
ATATAACTTT GTTCCTTTTT TGTAACATTT TTCTGCAG

>Vigan.08G028000.01
ATGAGTTTTC AAATCAAGAA ACCAATATTT TCAGCCCTCG TATCAGTATT ACTCATTTCA ATTACAAAAC TCTTCCATTC
TTATTTCTCA ATACCATTCT CACCATTCAA TGTTTCCATT CCTATTGCCA CGACCCTTTC TGTTCTAATC ATATGCAAAT
TTTTCTTAAC TTCTAAAACC CACTCTTCCA CTCCCCCTGG TCCTCTATCA GTTCCTATAT TTGGTAACTG GTTGCAAGTT
GGCAACGATC TCAACCACCG TCTTCTAGCG TCAATGTCAC AGACCTATGG TCCTGTGTTC CTACTCAAAC TAGGTTCCAA
AAACTTGGTT GTGGTCTCTG ATCCCGAGCT CGCCACCCAA GTGCTCCATT CACAAGGTGT GGAATTTGGC TCGCGCCCAC
GAAATGTTGT GTTTGATATC TTCACTGGGA ACGGCCAAGA CATGGTTTTC ACTGTTTATG GTGACCACTG GCGCAAAATG
CGCAGAATCA TGACGCTGCC ATTCTTCACC AACAAGGTTG TCCACAACTA CAGCAGCATG TGGGAGGAGG AGATGGACCT
GGTGGTGCGT GACCTCAACC TGAATGAGAG AGTGAGGAGC GAAGGCATTG TTATCAGAAA GCGGCTTCAG TTGATGCTAT
ACAATATCAT GTATAGGATG ATGTTTGACG CCAAGTTTGA GTCACAAGAG GACCCTTTGT TCATTCAGGC CACGAGGTTT
AACTCCGAGA GAAGCCGTTT GGCACAGAGT TTTGAATACA ATTATGGGGA TTTTATACCA TTGCTCAGGC CGTTCTTGAG
GGGGTACCTA AACAAGTGCA AGGACTTGCA ATCTAGGAGG CTTGCATTTT TCAACACCCA CTACGTTGAG AAAAGAAGAC
AAATAATGGC TGCCAACGGG GAGAAACACA AGATCAGCTG TGCTATTGAT CACATCATAG ATGCACAGAT GAAGGGAGAA
ATCAGTGAAG AGAATGTGAT ATATATAGTA GAAAACATCA ACGTTGCAGC AATCGAGACA ACATTATGGT CCATGGAATG
GGCAATAGCA GAGTTGGTTA ATCATCCAAG CGTTCAAAAG AAGATACGTG ATGAGATATC AGAAGTGCTT AAAGGGGAGC
CAGTGACGGA ATCCAACCTA CACGAGCTCC CATACTTACA AGCAACTGTG AAAGAAACAC TGAGACTTCA CACCCCGATT
CCTCTCTTGG TGCCCCACAT GAACCTGGAA GAAGCAAAGT TAGGAGGGTA CACTATACCA AAGGAGTCCA AGGTGGTGGT
GAATGCTTGG TGGCTTGCGA ACAACCCATC ATGGTGGAAG AATCCAGAGG AGTTCAGGCC AGAAAGGTTT TTGCAAGAGG
AGTGTGCAAC AGATGCTGTT GCTGGAGGAA AGGTTGATTT TAGGTTCGTG CCATTTGGTG TGGGGAGGAG GAGTTGCCCT
GGAATCATAC TTGCATTACC AATACTTGGA CTTGTGATAG CAAAAATGGT GTCAAATTTT GAGCTGAGTG CTCCAAAAGG
GACAAAGATA GATGTAAGTG AAAAAGGAGG GCAATTCAGC TTGCACATTG CCAACCACTC CACTGTCTTG TTCCATCCAA
TTAGAACCCT GTGA

>Vigan.08G028000.01
MSFQIKKPIF SALVSVLLIS ITKLFHSYFS IPFSPFNVSI PIATTLSVLI ICKFFLTSKT HSSTPPGPLS VPIFGNWLQV
GNDLNHRLLA SMSQTYGPVF LLKLGSKNLV VVSDPELATQ VLHSQGVEFG SRPRNVVFDI FTGNGQDMVF TVYGDHWRKM
RRIMTLPFFT NKVVHNYSSM WEEEMDLVVR DLNLNERVRS EGIVIRKRLQ LMLYNIMYRM MFDAKFESQE DPLFIQATRF
NSERSRLAQS FEYNYGDFIP LLRPFLRGYL NKCKDLQSRR LAFFNTHYVE KRRQIMAANG EKHKISCAID HIIDAQMKGE
ISEENVIYIV ENINVAAIET TLWSMEWAIA ELVNHPSVQK KIRDEISEVL KGEPVTESNL HELPYLQATV KETLRLHTPI
PLLVPHMNLE EAKLGGYTIP KESKVVVNAW WLANNPSWWK NPEEFRPERF LQEECATDAV AGGKVDFRFV PFGVGRRSCP
GIILALPILG LVIAKMVSNF ELSAPKGTKI DVSEKGGQFS LHIANHSTVL FHPIRTL*