GBrowse Details

Vigan.07G195800.01

Basic Information:
Name: Vigan.07G195800.01
Multiple alignment
Variant Information
Position: Chr07:27053366..27055772 (- strand)
Length: 2407
Functional Information:
Description: Similar to UPF0182 protein jk1603, putative. [XP_007052619.1, Theobroma cacao]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:5.44,33.27,13.11,81.88,16.19,44.33,17.74,27.99
Automatic updates:
Name: NM_001250637 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306614 (LOC100306614), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:27053366..27053812 (- strand)
Length: 447
Type: three_prime_UTR
Position: Chr07:27053813..27054062 (- strand)
Length: 250
Type: CDS
Position: Chr07:27055540..27055664 (- strand)
Length: 125
Type: CDS
Position: Chr07:27055665..27055772 (- strand)
Length: 108
Type: five_prime_UTR

>Vigan.07G195800.01 class=Sequence position=Chr07:27053366..27055772 (- strand)
ATAAAAATTT TAAACCAGAA AATAAATGTG TAGATATTTA TTTAAAAATT TGATGGTCCT TGTTTGTTTT GTGTAGAGTG
TGAGTGTTTG TGAGAGTGAG AGAGTGATAT GGCGCTGAGA ATCTCACACG CAGCACTACC ACAGGCTCAG CTCAGACTAG
GGTTTCCTTC GCCACCTCAA TTTCTCTCCA TTGCTCCACC TCTCAAATTC TCTCTCTCCT CTTCTACCTT CAGGTTCACA
CTGTTTCACC TTTTTCATTC AATTTTTTAT CTCTTCATCC TTAATTTTTA CATCTTAGTT CTGTAGTTCT TTTCTGTACA
TTTTTATTTG CATTTGCTCG GTTTGTGTTT TAAATTGCTC TCCGCTTTAT ACTGTTTTTT TTTTTTTTTA ATTTCGACAT
CTATATGGCG GTGGAAGCCA GTTTTTGGTT TTGCAGTGTG CTGAACTAAC AGAGTTGTTG GTTTGAATAG TTGTGATAAA
ATCCTGCGAG TTCTTTCTTA TTTTTGTTTA GTTTTTTTTG CAGAACTTAG ATGCAGTCTT TTAGTGTTGT TCGTTGGTGA
GAATTGTAGT TTTATTTCGA TGTTCTACAT TGATCATTAT TAAGCAAACA TTGTTATGAA GTTACTGAGA TAGAACTCTG
AATTTGATAA GAGAACGTTA TCAAAAGCCA CTTTAGGGAT TACATATATG TTTTGTCTCT AAATTTTTGT GGGCTGTCAG
TTAATGAATA AGAGCAGACC TAAAACCTTT GTCTGAACAT AGTGTTATTT TTCAATTAAA ATTAAAGTTT TACATCGATA
ATCTACATTT ATCTTTAATG CAAACCATTA ATATATGCAA CTTAACTAGA CGAAACTTCA ATTTTGATTG GAGAACCATA
CCAAAAGAAA ATATGCAATT GCATCAAAGT TTTCTTTAAA ATTCTGTTGT TTGGCAATGA AAAAAATATG GGGTTGTCAC
TAAATAAATA AGTGGAGGCT TGGATTCTTC ATTCTTCAAT TTTTATTGGA CAAATTGTAC AATCTTGGAC TTTGCTTTGT
TTAATGGTTC TTATCTTAAT CCTTTTCTTA TTTTTTAATA AAACGATTTC TCACTATCCT CCTGTTTATC AAGCAAGCAC
CTGAGGCTTT TGAAGTTATT GAACAGGCAC ATATTTATGG TGGAAAAAGA AGTTGGGCTA AACTGTTTTC ATACTAGTTA
TAAGTTATTT ACAGAAACTA TCCAGAGAGT TTATTAAAGT AAGCCAAAAA TTGTCATAAG CTCTTCCAAA CCCGTGCACG
AGTTGTCAGA AGATAAATCT GAAAAAGTTA AGCTGTATGT AAGTCTTCTA ACAGAAACCT TAGATGCGCA TGGTTGGGTA
TGTTAGTTTG GGAGGGGAGA GAGGAGAGGG TTAATTTGGA TTTCTAAAAA CAGAAAATGA TAAAAGTATT TATAGAAAAG
AACAAATAAT GTTTGGAAGT TTACTTGTTA GTTGTGCTTT CTGTTCCTCG TATTTAAAAA AAAAAATTAA ATTATGAGAA
ATTTTTACCT AAAATGAAAC AACTCTCCCC TCTTCCATTC TATCATATTA CTTGAATTAC CACAGGTGTG TGTTATCTAC
ATTGTTGTAA TAATTGTATC CTTTTTACTC ACAAATGTTT TATCTTATTT CTATTGTAAT ATATCATCAG ACTGAAACTG
TATATATCTT CTGGTTTGGA TTGTATTCAG GTGCAAAGTT TTTAGGAGAT TGAAAGTGAA TCAGAGGCTG TTGACTGTGT
TCGCAACAAA CCCTAACTCT GTAGATGGGA AATCACCCAA AGAAGGATCA GATGTAAATG AAACTAGCAA TGCTTCTCAG
GGTCCTCCTC TCCTTACTAT TTTGGCTGGA TTTTTTGTCC TTTTCGTCGT TTGTTGGAGC ATTTGGTCCA TTATAGCGTG
GCTGATAAGT TTGATAGTTA CTGCACCTGC TCCAAAATAA ATTTGATTAT AATGTTTGTG TTTGTTTTAA GCCACTGCAT
TAGTCCTTAT GGATTTGTCT TAGTTTCTTT CTACGCTTTT TGACTTAGTA GTATTTGAGT GCTAAACATG CTAAAGTGAG
CCAAAAGCTG GTAAAGGTAA GAAACAGAAT TGGCAACTCC TAATGCTGGT CTTAAGTGGG AGAGAGCTTA TGTTCACGTC
TGGGTATTGT CAACCATCTT TTAGTTATAG ATTCCATTGG GGCTGACTTT GGTATATATT TTGAAGAACT CTGTAGTTGC
TTATTCTTTT GCTTATGTCT ACTTATATTC TGGAGAACAG TAGATCCATT GGGTTAGATA TTTTGAAACA CGGCAGAGAT
TCTGGTATTC CTAATTCAGT CTTTTAAAAA AGTTTAGGGA CTCGTATACT TGTTTTTATT TCCAACTACT ATTTTTTTAT
CGCAAAA

>Vigan.07G195800.01
ATAAAAATTT TAAACCAGAA AATAAATGTG TAGATATTTA TTTAAAAATT TGATGGTCCT TGTTTGTTTT GTGTAGAGTG
TGAGTGTTTG TGAGAGTGAG AGAGTGATAT GGCGCTGAGA ATCTCACACG CAGCACTACC ACAGGCTCAG CTCAGACTAG
GGTTTCCTTC GCCACCTCAA TTTCTCTCCA TTGCTCCACC TCTCAAATTC TCTCTCTCCT CTTCTACCTT CAGGTGCAAA
GTTTTTAGGA GATTGAAAGT GAATCAGAGG CTGTTGACTG TGTTCGCAAC AAACCCTAAC TCTGTAGATG GGAAATCACC
CAAAGAAGGA TCAGATGTAA ATGAAACTAG CAATGCTTCT CAGGGTCCTC CTCTCCTTAC TATTTTGGCT GGATTTTTTG
TCCTTTTCGT CGTTTGTTGG AGCATTTGGT CCATTATAGC GTGGCTGATA AGTTTGATAG TTACTGCACC TGCTCCAAAA
TAAATTTGAT TATAATGTTT GTGTTTGTTT TAAGCCACTG CATTAGTCCT TATGGATTTG TCTTAGTTTC TTTCTACGCT
TTTTGACTTA GTAGTATTTG AGTGCTAAAC ATGCTAAAGT GAGCCAAAAG CTGGTAAAGG TAAGAAACAG AATTGGCAAC
TCCTAATGCT GGTCTTAAGT GGGAGAGAGC TTATGTTCAC GTCTGGGTAT TGTCAACCAT CTTTTAGTTA TAGATTCCAT
TGGGGCTGAC TTTGGTATAT ATTTTGAAGA ACTCTGTAGT TGCTTATTCT TTTGCTTATG TCTACTTATA TTCTGGAGAA
CAGTAGATCC ATTGGGTTAG ATATTTTGAA ACACGGCAGA GATTCTGGTA TTCCTAATTC AGTCTTTTAA AAAAGTTTAG
GGACTCGTAT ACTTGTTTTT ATTTCCAACT ACTATTTTTT TATCGCAAAA 

>Vigan.07G195800.01
ATGGCGCTGA GAATCTCACA CGCAGCACTA CCACAGGCTC AGCTCAGACT AGGGTTTCCT TCGCCACCTC AATTTCTCTC
CATTGCTCCA CCTCTCAAAT TCTCTCTCTC CTCTTCTACC TTCAGGTGCA AAGTTTTTAG GAGATTGAAA GTGAATCAGA
GGCTGTTGAC TGTGTTCGCA ACAAACCCTA ACTCTGTAGA TGGGAAATCA CCCAAAGAAG GATCAGATGT AAATGAAACT
AGCAATGCTT CTCAGGGTCC TCCTCTCCTT ACTATTTTGG CTGGATTTTT TGTCCTTTTC GTCGTTTGTT GGAGCATTTG
GTCCATTATA GCGTGGCTGA TAAGTTTGAT AGTTACTGCA CCTGCTCCAA AATAA

>Vigan.07G195800.01
MALRISHAAL PQAQLRLGFP SPPQFLSIAP PLKFSLSSST FRCKVFRRLK VNQRLLTVFA TNPNSVDGKS PKEGSDVNET
SNASQGPPLL TILAGFFVLF VVCWSIWSII AWLISLIVTA PAPK*