GBrowse Details

Vigan.07G134600.01

Basic Information:
Name: Vigan.07G134600.01
Multiple alignment
Variant Information
Position: Chr07:15071388..15073774 (+ strand)
Length: 2387
Functional Information:
Description: Similar to Uncharacterized protein. [I1M360, Glycine max]
GO: Cellular Component: nucleus (GO:0005634)
Molecular Function: DNA binding (GO:0003677)
InterPro: Transcription factor, SBP-box (IPR004333)
Squamosa promoter-binding protein (IPR017238)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.83,0.00,24.72,0.87,0.00,0.14,0.85,0.23
Automatic updates:
Name: BT089447 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-2A13 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:15071388..15071531 (+ strand)
Length: 144
Type: five_prime_UTR
Position: Chr07:15071532..15071959 (+ strand)
Length: 428
Type: CDS
Position: Chr07:15072358..15072589 (+ strand)
Length: 232
Type: CDS
Position: Chr07:15072590..15073774 (+ strand)
Length: 1185
Type: three_prime_UTR

>Vigan.07G134600.01 class=Sequence position=Chr07:15071388..15073774 (+ strand)
AAACAAACCA CATCCCCATG CATTACTTCC CCCCCACCCT ATGCTAACAA AGCAAACAAC CAACAAAATG AAGTTTGTGG
TCCACACCCT TCCCTCTTCT TTTTCTACCC TTTTTGGCTC CATATAAACT CTCATTCCCT CACAATGCTC CCAGAGACAA
CCTCTAACCG TTTTCTTGCC CCCAGCATCT TCTCTTCTTC TTCTTCTTCA TACTTGTCAA AACTCATAAT GGAGATCAAG
AGTAGAGACA GGAGGCAAGT GTCAATTGAG AAGGTGAGGA GAGACAGTCC GGTTGAAGTA GAAGAGGAGG AAGAGGAGGA
GGATGAAAGT GTGGCTGGCG TTGAGGGCTG TCTTGCAGAA GATGAGAGGA AGAAGGGTGG GGCAGGTGGT GGGAGAAGAG
GGTCTACTGG AGGTGGAGTT TCTCCACCGT CTTGTCAAGC AGAGATGTGT GGTGCTGATT TGACTGTTGC AAAGAGGTAC
CATCGCCGCC ATAAGGTGTG TGAGCTTCAT TCCAAGGCAC CTTTTGTGAT GGTTGCAGGA ATGAGGCAGA GGTTTTGCCA
GCAATGTAGC AGGTGTTAAA TCCCTCATCT AAACTAAAGC ATTTTCTCTT GATGTAAACC TGTATTCCTT TAGCATCTTC
ATTATATATA GTAGAGTTGA TCATGCTTAT CCATGAAAAT TTTGAAACTA AGCATTGTAA TATTTTTGAA GTAGTCCTTT
AAATTGAAAC TATGAACAGA CTTCTTGTAA TTAGAGTCAT GCTTTGAATC TTAATCAGTG ACTAAAAAAT TTGTTGTTGT
GTTACTCAAG AAACATTTTC TGATGCATAC ATCAGAAACA TACATTAAAA ATTCAACTTC AGTGCTTGGA TCTTTTAACT
CATCTTCCAT ATAAAGAAGA ATTGTCAACT ATTTCAAGGG ATTGCTTCTA TACATTTTCC GTGTTAGAAA CCTGTGATGA
GTTTGTGCAG GTTCCATGAG CTGGCAGAGT TTGACGAAGC AAAAAGAAGC TGCCGGAGAC GCTTGGCAAG ACATAATGAA
CGGCGCCGGA AGAGCAATGC TGAGACTTGC AATGAAGGAT GCAGCAGCAG CAGCAAAGGA CAGCAGCCTA CAGAAAGCCT
CTGCAGAAAT GCTGATGACT GGGGAAGAAT TCAGATGAAC ATGGCAAGGA ATTCTGGTTA CAGGTCCTTC CACTTCAGAT
GAATTTAATG TGTTCATCAG CATGCTCCCT CTCTTCTGTC AACGGATCTT AACAATATGC CAAGGCATAT AATAAAGTCC
ACTTTTTATG TTAGGAGAAT AAGCATCTAA ACCAGAATTA AAAACTCCCA ACACTTAAAG GTGGTGTCAT ATGTAAACTA
CGTCATGGTG CTGAAGCTCT ATATTTTATT ATTTACTTAC CAAGTTTCTT ATGTTTCTGT GTGCCTTGAT ACCACCCTTA
AAATGATGTA TTTCCCCATT ATTAGAATAA AATCCATAGT TTATTGAGTA AATTCAGGTA TCTCTTTCAA TTATTTATAT
AGATTCAATA GACTCAAAAC GTATAAAAGG GTAAAATAAA ATATCCACAA TAAATGTGTA GGATTTATTT GCATCTCCAG
TAAATAAAAC GGTAAGATAG CTCAAAATGG TAACAAACAT GTTCTTGTCT GCCCCTGTCA ATTATTGATA TGCTTATGAC
CCTGCAAAGC CATCACCCTC CCTCCTATTT ATGAAAAGAT ATTGTTGAAG GTCAATCCCA GGTTCCTTCT GAAAAATAAC
AACAAATTAT GACAACAATG AAAGGAGTAA TACAAGCAAA TAACTTGATC TAAAATCTTA GAGACCTAGG AAGTGATCTA
AAAGTAAGGT TCTAAGATCA CTGACAAAGC CAAACCTCCT TGCAAACTTG CAGATTAAAG TTTGGTCTAT ATAATCACAG
AATCTACATC TTGCTCACAT TGTTAATTTG CATGAAGGAC TCAACATAAT TTATCATTTT ATTCATTACA CCGCAGTATA
TGTTACACTT GGAAGTTGCT GGTTCAAAGT ATGTCATGTG AGTGTTGTGA TCACTGAAAT TTGACAACAA TGCACGAGAT
ATCATCAGTG CTTTTCTTGT TAACTGCTTC TTCGGTAAGG CGCTTTGCTG AAGACCGAGC ATCCTTTATA TTTTTGATAC
AATTAACTGC TTCTTGATTT GACATGACCT GAAACAATTT GAACAAACAG ATTTGAACAT TAGATAAAAC TCCACAAGCA
CCAAACATGA CTACTTAGAA ACTACTCTTT AGGCCATATC AGACACATAC ACTCTTCAAT CCCTACTGTC CAAACCTACA
AGGACTAAAA CCGATCAAAA AAAATACTAA ACAGAGTTAA AAAGTATGTG TGCATGGACT AAAAAAC

>Vigan.07G134600.01
AAACAAACCA CATCCCCATG CATTACTTCC CCCCCACCCT ATGCTAACAA AGCAAACAAC CAACAAAATG AAGTTTGTGG
TCCACACCCT TCCCTCTTCT TTTTCTACCC TTTTTGGCTC CATATAAACT CTCATTCCCT CACAATGCTC CCAGAGACAA
CCTCTAACCG TTTTCTTGCC CCCAGCATCT TCTCTTCTTC TTCTTCTTCA TACTTGTCAA AACTCATAAT GGAGATCAAG
AGTAGAGACA GGAGGCAAGT GTCAATTGAG AAGGTGAGGA GAGACAGTCC GGTTGAAGTA GAAGAGGAGG AAGAGGAGGA
GGATGAAAGT GTGGCTGGCG TTGAGGGCTG TCTTGCAGAA GATGAGAGGA AGAAGGGTGG GGCAGGTGGT GGGAGAAGAG
GGTCTACTGG AGGTGGAGTT TCTCCACCGT CTTGTCAAGC AGAGATGTGT GGTGCTGATT TGACTGTTGC AAAGAGGTAC
CATCGCCGCC ATAAGGTGTG TGAGCTTCAT TCCAAGGCAC CTTTTGTGAT GGTTGCAGGA ATGAGGCAGA GGTTTTGCCA
GCAATGTAGC AGGTTCCATG AGCTGGCAGA GTTTGACGAA GCAAAAAGAA GCTGCCGGAG ACGCTTGGCA AGACATAATG
AACGGCGCCG GAAGAGCAAT GCTGAGACTT GCAATGAAGG ATGCAGCAGC AGCAGCAAAG GACAGCAGCC TACAGAAAGC
CTCTGCAGAA ATGCTGATGA CTGGGGAAGA ATTCAGATGA ACATGGCAAG GAATTCTGGT TACAGGTCCT TCCACTTCAG
ATGAATTTAA TGTGTTCATC AGCATGCTCC CTCTCTTCTG TCAACGGATC TTAACAATAT GCCAAGGCAT ATAATAAAGT
CCACTTTTTA TGTTAGGAGA ATAAGCATCT AAACCAGAAT TAAAAACTCC CAACACTTAA AGGTGGTGTC ATATGTAAAC
TACGTCATGG TGCTGAAGCT CTATATTTTA TTATTTACTT ACCAAGTTTC TTATGTTTCT GTGTGCCTTG ATACCACCCT
TAAAATGATG TATTTCCCCA TTATTAGAAT AAAATCCATA GTTTATTGAG TAAATTCAGG TATCTCTTTC AATTATTTAT
ATAGATTCAA TAGACTCAAA ACGTATAAAA GGGTAAAATA AAATATCCAC AATAAATGTG TAGGATTTAT TTGCATCTCC
AGTAAATAAA ACGGTAAGAT AGCTCAAAAT GGTAACAAAC ATGTTCTTGT CTGCCCCTGT CAATTATTGA TATGCTTATG
ACCCTGCAAA GCCATCACCC TCCCTCCTAT TTATGAAAAG ATATTGTTGA AGGTCAATCC CAGGTTCCTT CTGAAAAATA
ACAACAAATT ATGACAACAA TGAAAGGAGT AATACAAGCA AATAACTTGA TCTAAAATCT TAGAGACCTA GGAAGTGATC
TAAAAGTAAG GTTCTAAGAT CACTGACAAA GCCAAACCTC CTTGCAAACT TGCAGATTAA AGTTTGGTCT ATATAATCAC
AGAATCTACA TCTTGCTCAC ATTGTTAATT TGCATGAAGG ACTCAACATA ATTTATCATT TTATTCATTA CACCGCAGTA
TATGTTACAC TTGGAAGTTG CTGGTTCAAA GTATGTCATG TGAGTGTTGT GATCACTGAA ATTTGACAAC AATGCACGAG
ATATCATCAG TGCTTTTCTT GTTAACTGCT TCTTCGGTAA GGCGCTTTGC TGAAGACCGA GCATCCTTTA TATTTTTGAT
ACAATTAACT GCTTCTTGAT TTGACATGAC CTGAAACAAT TTGAACAAAC AGATTTGAAC ATTAGATAAA ACTCCACAAG
CACCAAACAT GACTACTTAG AAACTACTCT TTAGGCCATA TCAGACACAT ACACTCTTCA ATCCCTACTG TCCAAACCTA
CAAGGACTAA AACCGATCAA AAAAAATACT AAACAGAGTT AAAAAGTATG TGTGCATGGA CTAAAAAAC

>Vigan.07G134600.01
ATGCTCCCAG AGACAACCTC TAACCGTTTT CTTGCCCCCA GCATCTTCTC TTCTTCTTCT TCTTCATACT TGTCAAAACT
CATAATGGAG ATCAAGAGTA GAGACAGGAG GCAAGTGTCA ATTGAGAAGG TGAGGAGAGA CAGTCCGGTT GAAGTAGAAG
AGGAGGAAGA GGAGGAGGAT GAAAGTGTGG CTGGCGTTGA GGGCTGTCTT GCAGAAGATG AGAGGAAGAA GGGTGGGGCA
GGTGGTGGGA GAAGAGGGTC TACTGGAGGT GGAGTTTCTC CACCGTCTTG TCAAGCAGAG ATGTGTGGTG CTGATTTGAC
TGTTGCAAAG AGGTACCATC GCCGCCATAA GGTGTGTGAG CTTCATTCCA AGGCACCTTT TGTGATGGTT GCAGGAATGA
GGCAGAGGTT TTGCCAGCAA TGTAGCAGGT TCCATGAGCT GGCAGAGTTT GACGAAGCAA AAAGAAGCTG CCGGAGACGC
TTGGCAAGAC ATAATGAACG GCGCCGGAAG AGCAATGCTG AGACTTGCAA TGAAGGATGC AGCAGCAGCA GCAAAGGACA
GCAGCCTACA GAAAGCCTCT GCAGAAATGC TGATGACTGG GGAAGAATTC AGATGAACAT GGCAAGGAAT TCTGGTTACA
GGTCCTTCCA CTTCAGATGA 

>Vigan.07G134600.01
MLPETTSNRF LAPSIFSSSS SSYLSKLIME IKSRDRRQVS IEKVRRDSPV EVEEEEEEED ESVAGVEGCL AEDERKKGGA
GGGRRGSTGG GVSPPSCQAE MCGADLTVAK RYHRRHKVCE LHSKAPFVMV AGMRQRFCQQ CSRFHELAEF DEAKRSCRRR
LARHNERRRK SNAETCNEGC SSSSKGQQPT ESLCRNADDW GRIQMNMARN SGYRSFHFR*