GBrowse Details

Vigan.07G014700.01

Basic Information:
Name: Vigan.07G014700.01
Multiple alignment
Variant Information
Position: Chr07:978767..981939 (+ strand)
Length: 3173
Functional Information:
Description: Similar to amino-acid racemase-like. [XP_004486690.1, Cicer arietinum]
GO: Biological Process: nitrogen compound metabolic process (GO:0006807)
Biological Process: metabolic process (GO:0008152)
Molecular Function: racemase and epimerase activity, acting on amino acids and derivatives (GO:0016855)
Molecular Function: racemase activity, acting on amino acids and derivatives (GO:0036361)
InterPro: Asp/Glu racemase (IPR001920)
Asp/Glu/hydantoin racemase (IPR015942)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.09,1.22,8.28,6.23,2.96,14.91,1.18,5.03
Arabidopsis thaliana homolog: AT1G15410.1
Structure :
Position: Chr07:978767..979174 (+ strand)
Length: 408
Type: five_prime_UTR
Position: Chr07:979175..979879 (+ strand)
Length: 705
Type: CDS
Position: Chr07:981372..981659 (+ strand)
Length: 288
Type: CDS
Position: Chr07:981660..981939 (+ strand)
Length: 280
Type: three_prime_UTR

>Vigan.07G014700.01 class=Sequence position=Chr07:978767..981939 (+ strand)
ATTTTCTTGG TTGAATTCAT TTACATGATA TTTTAGTTAT TTTCAACAAA TGTATAGATG TAAGTGATGG ATAACACATC
AGTCTCTCTG TTTTTTTTTT TCTGAATAAA AAAGAGTAAA CGGAAAGAGT CAGTGAAGAA TTGTGGTTGG GTGATGTGTA
ACAGTGCAAG GGTGGAGAAA GAGAAGCATG GTGTGGTGGG TTTTACTGTG AGGTGAGAAT TGAGAAAGGT TGGTGTCAAA
TTGTGAAGCC ACATGTCTGC ACAAGGGCTT TTCTACAACA TGCTTCTTCT TCATCGAGGT TCTTACTCTG CAACTCAAAT
GGGGTTGTAG ATTTCACACA CAACGCAACA GAATAACAAA CACAAGGCTA GAGTGAACTC CAGCTCTCAA ATTTCGTGGA
CATTGGAGAT GTTGGACGTG ATGTCTTTCA GTTATCCGTT CCAAACATTA TTACTAGGTT GTGTAGCTGC TCCCACTCGC
AGATACTTTT GCAGGACAAG GTGGTGCCAT GTTCAAGCCA CACCCCCATC TTCAGTTATT TTGAATGCAG ATGAAAGTGG
GAAGTTTTCT GAGAAGATTC ATGCCACAAA CCTTGCTTCA GGAAAGGGTG CTCCTTTCGC CACTCAGGGA AGTACTGTGG
GTATAATTGG AGGGGTGTCT GTGGATGCCA CTCTCAAATT TTTGAGAAAA CTTGTGGAGT TGAGTTCAGA AGATGGAGGA
AATTCTATTC CTTTTGTACT GTGTTCTGAT CCTCTCTTTA GTAAGGAGCT TCTGTCCTTT GAAAGGAGTT ATTTTGTTTC
TAGCACAAGT AGAGCGGAAA ATTTGAAGCT GGATTCTTCT CCGATTGTGG AGAGTCTCAG AAACAAGAGG GTTTTTCTTG
AGAATTCTGG GGCAAGTTGC ATAGTCATGC CTTGTAATGT GTCACATTCT TGGTATGAAC AAGTGTGCGA GGGATGTTCT
GTTCCTGTTC TTCACATGGC CGAGTGTGTT GCCAAGGAGC TCAAGGAAGC TAAGCTAAAG CCTCTTGAAG CCGGTAGTCC
TTTGCGGATT GGAGTGCTAG CAACAAATGC AACTCTGGCA GCTGGTTTTT ATAAAGAGAA GCTTCAAAAT GAAGTAATTT
CCCTATGCTG TTTTCAATAA CCTGATATCT TAATATCAAG CAAATTTTAT TACTGCACAC TAGGCTTAGA GGAATTAATA
ACTCAGGTTA ATGTTGTTAC TCTGAGGAAT GTCCATTACA GTGTTGCTTT TCATAGTAGA ACTTTCAGAA CACACTATAT
GATCCAGACC TGGAACAAAT TCTTTTGAAA TTTGTTGTTT TCTTCCTGTG ACTTTACGAC CATAGAATAA CTGCAGCATT
TTTTATGGAG TTAATACAGA TTTGAGCATA TAAAATTTCC TAACCATAAT GTAACAGGTG AAGGCCAAAG ACATTCATTT
TTAGTTGACA CAGATTATAG GAACCTGCCA GTTACCATTT ATAATGGGAA ATGCGACAGA TTATAGGTCT TTTGGAATTG
GGAGTTAGGA GCTTTCTTTC AATAGTCTGA GCCAGTTTCT ATTAGGGGTA TTTCATACTT TGTGAAATTT GAGATGCCTA
ATTTAATGCA TTAGCACTTC CTGACCTCTC AATTTCATAT CCATGTCCTT TTCTTTTTCT TCGGCAAGCC ATATATCTAT
GTATGTACAT TGCTTACAGC TTTGTTTCTG TTCAATAGGA TGCAATGGGT AGATAATTTG TTTTGTATTT GTTTACTTGC
TTCTTAATTT CATTCAACTA GTGCCGACTA CATTGCTTGT ATGCAAACCA AAAGCACCGT GACAGTGTTT CTTCTCGATC
ATTAAATTTC TACATCTTTT AGACCCAGTG TTCTTAGTGA ACCCATTATC TATTTTCTGT GTCAAAACCT ACATCTAGAA
CATTAAAAAT GAATCAGTAG TTTAGTATTG GATTGATATT ATGGCAGTTG GAAGACAAAA ACCTAAGAAG GGGGGACTTT
TTATCCCATA TTTCCTTTGT AATAGAGTAT AAGATCTTAA TGTTTTCTTT GTAATGCAGA GCATGTGCTG TCAGAAGCTT
TTGCTTTATT ACACAATACA ACAGACACTT CATACATGTA TATATGTACA CTTTCATATA TTTGTAGTTT CTCTTCTGGT
TTAGGTTCAT TAGCACATTT TCATATATAA AGAATAATCT CTGTGCGTGC GTGCATGCAA AGTATAATTA GATCTCATGA
TTGATATTAT GAACAATGAA AGAATTCTAC CTGGCTACGA CTGCAGCTCT ATTAGACTAT TATGTCTGTG CACTGCAGAG
TTACCAATTA CCACTGCTGC TAAAAACTTG AATGGTATCT GCAATATGTT CATAATGAAT TTTGTATTTC TGCGCCTGAA
CATGCAACTT TTTGTTGGTT TTTGCAATTC TTTTCATTTT CTTATTTATG AACAAGGAGT CGTGCCAAGT ATGCACTTAC
ATATAATGCA CTACTAGTTG TTTTTCACTT TTTCTGCAAT GATTAAAAGA CAATGTTGAA TTGGGATGAC ACTTGAGAAG
CCATAGAGAT TTGGATATTT GTTAATTTCA TTTACTTATA TTCAGGGTTT TGAGGTTGTA CTGCCTGATA GAGCAACAAT
GGAGCATACA GTGATACCTG CAATTGAAGC TTTGAACAGA AAGGACATGG AAGGAGCATG CAATCTATTG AGAATTGCAC
TTCAAGTTCT TTTGGTGAGA GCAGCAAATT CTGTTATTCT TGCTTCTGAT GATATGCGGG ACCTCTTGCC CCCAGATGAT
CCTCTTCTCA AAAAATGTGT TGACCCAATG GACGCATTAG CCAGGTCAAC TGTAAAATGG GTAAAATCCT CTGGGCACAT
AATACATGAA TAACAAAGGA AAGCTACTAC TGTATTTTAC TGTGTATCAA TATTCTTCTG ATTTCATTCA CATCGTTCAT
TTCGTTAATG CAAACTCTTG TATTCACCAT GCTGAAGATG TATGTCGGTT TTCAGAGCAT GTATTGCTTT ATATCGATGC
GCAAATCACT GTTATTTGAG CTTTGAAAGA TTTTTTTTTT CTTATTAATT TTGTTCGAAA GGAGGAGTCG AACTTTAATA
CTGTGGGGTT TACAACAACT CAGGTATATT ATTCAGTCAA CAGTGTTGAA CTA

>Vigan.07G014700.01
ATTTTCTTGG TTGAATTCAT TTACATGATA TTTTAGTTAT TTTCAACAAA TGTATAGATG TAAGTGATGG ATAACACATC
AGTCTCTCTG TTTTTTTTTT TCTGAATAAA AAAGAGTAAA CGGAAAGAGT CAGTGAAGAA TTGTGGTTGG GTGATGTGTA
ACAGTGCAAG GGTGGAGAAA GAGAAGCATG GTGTGGTGGG TTTTACTGTG AGGTGAGAAT TGAGAAAGGT TGGTGTCAAA
TTGTGAAGCC ACATGTCTGC ACAAGGGCTT TTCTACAACA TGCTTCTTCT TCATCGAGGT TCTTACTCTG CAACTCAAAT
GGGGTTGTAG ATTTCACACA CAACGCAACA GAATAACAAA CACAAGGCTA GAGTGAACTC CAGCTCTCAA ATTTCGTGGA
CATTGGAGAT GTTGGACGTG ATGTCTTTCA GTTATCCGTT CCAAACATTA TTACTAGGTT GTGTAGCTGC TCCCACTCGC
AGATACTTTT GCAGGACAAG GTGGTGCCAT GTTCAAGCCA CACCCCCATC TTCAGTTATT TTGAATGCAG ATGAAAGTGG
GAAGTTTTCT GAGAAGATTC ATGCCACAAA CCTTGCTTCA GGAAAGGGTG CTCCTTTCGC CACTCAGGGA AGTACTGTGG
GTATAATTGG AGGGGTGTCT GTGGATGCCA CTCTCAAATT TTTGAGAAAA CTTGTGGAGT TGAGTTCAGA AGATGGAGGA
AATTCTATTC CTTTTGTACT GTGTTCTGAT CCTCTCTTTA GTAAGGAGCT TCTGTCCTTT GAAAGGAGTT ATTTTGTTTC
TAGCACAAGT AGAGCGGAAA ATTTGAAGCT GGATTCTTCT CCGATTGTGG AGAGTCTCAG AAACAAGAGG GTTTTTCTTG
AGAATTCTGG GGCAAGTTGC ATAGTCATGC CTTGTAATGT GTCACATTCT TGGTATGAAC AAGTGTGCGA GGGATGTTCT
GTTCCTGTTC TTCACATGGC CGAGTGTGTT GCCAAGGAGC TCAAGGAAGC TAAGCTAAAG CCTCTTGAAG CCGGTAGTCC
TTTGCGGATT GGAGTGCTAG CAACAAATGC AACTCTGGCA GCTGGTTTTT ATAAAGAGAA GCTTCAAAAT GAAGGTTTTG
AGGTTGTACT GCCTGATAGA GCAACAATGG AGCATACAGT GATACCTGCA ATTGAAGCTT TGAACAGAAA GGACATGGAA
GGAGCATGCA ATCTATTGAG AATTGCACTT CAAGTTCTTT TGGTGAGAGC AGCAAATTCT GTTATTCTTG CTTCTGATGA
TATGCGGGAC CTCTTGCCCC CAGATGATCC TCTTCTCAAA AAATGTGTTG ACCCAATGGA CGCATTAGCC AGGTCAACTG
TAAAATGGGT AAAATCCTCT GGGCACATAA TACATGAATA ACAAAGGAAA GCTACTACTG TATTTTACTG TGTATCAATA
TTCTTCTGAT TTCATTCACA TCGTTCATTT CGTTAATGCA AACTCTTGTA TTCACCATGC TGAAGATGTA TGTCGGTTTT
CAGAGCATGT ATTGCTTTAT ATCGATGCGC AAATCACTGT TATTTGAGCT TTGAAAGATT TTTTTTTTCT TATTAATTTT
GTTCGAAAGG AGGAGTCGAA CTTTAATACT GTGGGGTTTA CAACAACTCA GGTATATTAT TCAGTCAACA GTGTTGAACT
A

>Vigan.07G014700.01
ATGTTGGACG TGATGTCTTT CAGTTATCCG TTCCAAACAT TATTACTAGG TTGTGTAGCT GCTCCCACTC GCAGATACTT
TTGCAGGACA AGGTGGTGCC ATGTTCAAGC CACACCCCCA TCTTCAGTTA TTTTGAATGC AGATGAAAGT GGGAAGTTTT
CTGAGAAGAT TCATGCCACA AACCTTGCTT CAGGAAAGGG TGCTCCTTTC GCCACTCAGG GAAGTACTGT GGGTATAATT
GGAGGGGTGT CTGTGGATGC CACTCTCAAA TTTTTGAGAA AACTTGTGGA GTTGAGTTCA GAAGATGGAG GAAATTCTAT
TCCTTTTGTA CTGTGTTCTG ATCCTCTCTT TAGTAAGGAG CTTCTGTCCT TTGAAAGGAG TTATTTTGTT TCTAGCACAA
GTAGAGCGGA AAATTTGAAG CTGGATTCTT CTCCGATTGT GGAGAGTCTC AGAAACAAGA GGGTTTTTCT TGAGAATTCT
GGGGCAAGTT GCATAGTCAT GCCTTGTAAT GTGTCACATT CTTGGTATGA ACAAGTGTGC GAGGGATGTT CTGTTCCTGT
TCTTCACATG GCCGAGTGTG TTGCCAAGGA GCTCAAGGAA GCTAAGCTAA AGCCTCTTGA AGCCGGTAGT CCTTTGCGGA
TTGGAGTGCT AGCAACAAAT GCAACTCTGG CAGCTGGTTT TTATAAAGAG AAGCTTCAAA ATGAAGGTTT TGAGGTTGTA
CTGCCTGATA GAGCAACAAT GGAGCATACA GTGATACCTG CAATTGAAGC TTTGAACAGA AAGGACATGG AAGGAGCATG
CAATCTATTG AGAATTGCAC TTCAAGTTCT TTTGGTGAGA GCAGCAAATT CTGTTATTCT TGCTTCTGAT GATATGCGGG
ACCTCTTGCC CCCAGATGAT CCTCTTCTCA AAAAATGTGT TGACCCAATG GACGCATTAG CCAGGTCAAC TGTAAAATGG
GTAAAATCCT CTGGGCACAT AATACATGAA TAA

>Vigan.07G014700.01
MLDVMSFSYP FQTLLLGCVA APTRRYFCRT RWCHVQATPP SSVILNADES GKFSEKIHAT NLASGKGAPF ATQGSTVGII
GGVSVDATLK FLRKLVELSS EDGGNSIPFV LCSDPLFSKE LLSFERSYFV SSTSRAENLK LDSSPIVESL RNKRVFLENS
GASCIVMPCN VSHSWYEQVC EGCSVPVLHM AECVAKELKE AKLKPLEAGS PLRIGVLATN ATLAAGFYKE KLQNEGFEVV
LPDRATMEHT VIPAIEALNR KDMEGACNLL RIALQVLLVR AANSVILASD DMRDLLPPDD PLLKKCVDPM DALARSTVKW
VKSSGHIIHE *