GBrowse Details

Vigan.06G256400.01

Basic Information:
Name: Vigan.06G256400.01
Multiple alignment
Variant Information
Position: Chr06:37826012..37829127 (+ strand)
Length: 3116
Functional Information:
Description: Similar to Uncharacterized protein. [C6SY80, Glycine max]
InterPro: Uncharacterised protein family Cys-rich (IPR006461)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:86.06,51.23,32.23,29.97,32.41,73.45,61.03,26.54
Automatic updates:
Name: BT090127 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-3P5 unknown mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001252903 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cell number regulator 6-like (LOC100797735), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:37826012..37826219 (+ strand)
Length: 208
Type: five_prime_UTR
Position: Chr06:37826220..37826324 (+ strand)
Length: 105
Type: CDS
Position: Chr06:37826960..37827074 (+ strand)
Length: 115
Type: CDS
Position: Chr06:37827564..37827838 (+ strand)
Length: 275
Type: CDS
Position: Chr06:37828531..37828758 (+ strand)
Length: 228
Type: CDS
Position: Chr06:37828759..37829127 (+ strand)
Length: 369
Type: three_prime_UTR

>Vigan.06G256400.01 class=Sequence position=Chr06:37826012..37829127 (+ strand)
AAAGAAAGGT ATGACCGAGG AGAGTTGACT AGAGTAAGCA GCGTTCCAAC GCTGTTTCCT TTCTTTTCTT CTCCCAAGTC
CGAGACGAGA TCTACTACAT CGTTGTTCTG TTGCTCCGAA ATCCTTCAGA TCTTGTCCGT TTTCTGGCTC TGCTTTCTCG
GCGTCTAAAC TGCATCGTTT TGGCGTTGAT AATCGTGGAA TTGGGGAGAT GGAAGAACGG AAGCAATCGC GTTATGTGAA
GTTGACCAAA GATCAGACAC CTGTCGAAGA TATTACCCCT GGCGAACTCA ATCAGCCAAT ACAGGTTCCT CAGGTAAGGA
TTCCACTTCT TCTCTCAATT AATCCTTTTA TTCCCCAAAT TTGTATGTGT AACGATTACG GGAAAACCGT GTTCAAGGGT
TCTTCACTGA TTCTGTTCCA TTTCTACTGC AAGTGAAGAA ATCACGAAGG GGATACATAC TCTGTTGTGT TAATTAGTTT
GCAATTGCAG TCATGCATGC ACTCTATCAA ATGCGAATCA TTTATTTTTG TTTTAGGCCG CATTCGTTAA ACCTTCACTC
GTTTCTTTTT AATTTGTCCG GTGTTTTACA CTGTACGCGC TGAATTCCCT TACTAGCGTG GAATTAAATC TAGGAACCGC
AAACGTGCGC CAACCCCACA AATTGAATCA TTAAAACTCC AAATTTAATT GTATACCTGT GTTTAGGGAG ATATTGGATT
GTTTTAAAAT AGTGTAATAC TTAACATTCC TACTTTACAC CATATGATAA CTTCGTACAA ATTGTATTTT TTTTTTGTTG
ATTTGACTGT TCAGGTATAA TGTAGATCTT ATAAAGTTAG GCGTTCATAA AACGATTTTA TTTTGATACA TTTAAAATGT
AAATCGTGTT AATCTTAATA TATGAAGAAT TTCTAAATCA TTTTGGATTG ATCTGTGATG AATTTCAGTT GGATGTTCGC
AAGTGCCCTG AATGCAGACA GCCGCTACCT GAAAGTTATG CACCTCCTGC AGATGAACCT TGGATGACTG GGATCTTTGG
ATGTGCTGAA GACAGAGAAA GCTGTAAGTT AATACATGAC GAAGCTCCCA AATTGTACTG GTATTGGGAT AGTAGCTATG
ATATATTCTA GATTAGTCAA CTGAGATTTT TGGAGTGGCT GTGAATAGCC TTCATGGGTT TTCTTTTGCC AACGTAAATG
TTTCTAATTG ATGCGATTTA AACTTTACTA TATAAGGCTA GAATGCAGAT CCTTGAATTC ACTTAATGCT AACTAGTTGT
CTTGCCTGAT ACTAAAGTAA AGAGTGAGCA TCGTTATCAC AAATTTTTAT AGACTTCCTT TGACCAAGTT GTTCTCTTTC
AGTCAAAGTA TCTTCAATAT ATGTATGTTT GGGCTATGTC TTAAACTTCA ATGTGAAGGA TATATATATA TATATATATA
TATATATATA TATATATAAG TATAGATATA GGAGGAGTTT GCATGTTGCT GACATTTGAC GTACTATAGT GGAAAGCTGC
TACCTTTTAC ATGTTTTTGG TCTTCTTTAC AGGCTTGACT GGACTGTTTT GTCCTTGTGT ATTATTTGGG CGCAATGTAG
AAAGATTGAA GGAAGACACT CCTTGGACTG GGCCATGTAT TTGTCATGCC ATTTTTATTG AAGGTGGCAT TTCTCTGGCA
ATAGCAACTG CAGCTGCAAC TTCCTTCTTT CCTGTTGACC CAGGGACTGT ATGTCTCATT GTTGAGGGTT TATTTTTTAC
ATGGTGGATG TGTGGCATTC ACACTGGTCA AGTGCGGCAA TCCTTACAGA AGAAATATCA CTTGAAGGTA TATATATATA
TATCTTGAAA ATATTTTTTC ATCAGCACAA ATGGTCGAGT TAAATATGGA GTGTATGAGA TATCCTTCTA GTAGTTATTA
GTTTTGCTTC AAGGCGGGTA ACAATCACGT CCTTCAGTTA AGAGTTTATT CTGTTTGAAA ACCTGCTTTT AATTTCTTTT
TGAACAATAT GGTGACAAGG CAATTTTTAT GGAAGTGGAT GCATATTTTG AACTACACCA TTGGAATGGG ACCTATATAG
ACCTGATATC TCCAATATAA TTAGCTAACC ATGAAATCCT GAAAAACTTG TAGTGTTATC TTCTGTTTTC TTTATACTAC
AGTGCCAGAC ATGTATTCTC TTCCTTATCT GATGCAACTG GTAGAACTAC TCTTCCTTGT TTTTCAATAG TGGTCGGGAC
AATTTATTTA GACATTTTGC GTCATTTATG AGAACATGGT CATGCTAACG TGGGGTAAGA ACCTCGACAT TAGGCAAGCA
CCACAAGATC AAAAGTCTAA TGGCTGATTG TCACAGTGGA GGATTTCAGA TGGTCAAATT CAGTTCATAT AGCATTTGTT
GTGTTTCTTA AAAACTCAAT ACTGGCGCAT ACATGATTTA GTTAATTCTT TTTTGTACTG ATAAAAAAAA AGTTAAGTCT
TTCCTTTGAT CTTTAATTTT ACATGTTTTA TGATTGCAGA ATTCACCGTG TAATGCATGT TGTGTGCATT GCTGCTTGCA
CTGGTGTGCC TTGTGTCAGG AACACAGGGA GATGAATGGA AGGCTCTCAG ACAACATGTT TTCAGAAATG ACCGTTGTAA
ACCCTCCTCC CATTCAAGAG ATGAAATCTA CAGATGAGAA GGAAACTGCT GAAACGTCTT CACCCAACAA CAACGATCAT
ACTGATTTGG AGATACAGGC TGTATAAGGA AGGCATAGCA TTGTTAATAT CATGAGATTG GGGATACCAT GCGTTCTTAA
TAGGGATTTT TTTTTTCTTT TGACCTTTTA CTGGAGTTCT TTCTTCCTGC TTCATTGGAC GATTCACATG TAGGTTTATC
ACATAAACAC AACTTTCTTT GGCTTTATAC AGCCTAATTA TACCGAATCC TTAGTTTTAA ATTTCTTTTC CAGTTTCAAC
CATTACACAT CACATCACGC AACATCTGCC AGTAACTTTC TTTTGATTTT TTTTTCGGTT TATTTTTCGT ATTTATTTAT
TTCAATCAAG ATGTTAACAG CTGAATTATT TTAAAAAAAA TCAGCTTCTA ATTGATCATT CTGGTGAAGT GCTAAA

>Vigan.06G256400.01
AAAGAAAGGT ATGACCGAGG AGAGTTGACT AGAGTAAGCA GCGTTCCAAC GCTGTTTCCT TTCTTTTCTT CTCCCAAGTC
CGAGACGAGA TCTACTACAT CGTTGTTCTG TTGCTCCGAA ATCCTTCAGA TCTTGTCCGT TTTCTGGCTC TGCTTTCTCG
GCGTCTAAAC TGCATCGTTT TGGCGTTGAT AATCGTGGAA TTGGGGAGAT GGAAGAACGG AAGCAATCGC GTTATGTGAA
GTTGACCAAA GATCAGACAC CTGTCGAAGA TATTACCCCT GGCGAACTCA ATCAGCCAAT ACAGGTTCCT CAGTTGGATG
TTCGCAAGTG CCCTGAATGC AGACAGCCGC TACCTGAAAG TTATGCACCT CCTGCAGATG AACCTTGGAT GACTGGGATC
TTTGGATGTG CTGAAGACAG AGAAAGCTGC TTGACTGGAC TGTTTTGTCC TTGTGTATTA TTTGGGCGCA ATGTAGAAAG
ATTGAAGGAA GACACTCCTT GGACTGGGCC ATGTATTTGT CATGCCATTT TTATTGAAGG TGGCATTTCT CTGGCAATAG
CAACTGCAGC TGCAACTTCC TTCTTTCCTG TTGACCCAGG GACTGTATGT CTCATTGTTG AGGGTTTATT TTTTACATGG
TGGATGTGTG GCATTCACAC TGGTCAAGTG CGGCAATCCT TACAGAAGAA ATATCACTTG AAGAATTCAC CGTGTAATGC
ATGTTGTGTG CATTGCTGCT TGCACTGGTG TGCCTTGTGT CAGGAACACA GGGAGATGAA TGGAAGGCTC TCAGACAACA
TGTTTTCAGA AATGACCGTT GTAAACCCTC CTCCCATTCA AGAGATGAAA TCTACAGATG AGAAGGAAAC TGCTGAAACG
TCTTCACCCA ACAACAACGA TCATACTGAT TTGGAGATAC AGGCTGTATA AGGAAGGCAT AGCATTGTTA ATATCATGAG
ATTGGGGATA CCATGCGTTC TTAATAGGGA TTTTTTTTTT CTTTTGACCT TTTACTGGAG TTCTTTCTTC CTGCTTCATT
GGACGATTCA CATGTAGGTT TATCACATAA ACACAACTTT CTTTGGCTTT ATACAGCCTA ATTATACCGA ATCCTTAGTT
TTAAATTTCT TTTCCAGTTT CAACCATTAC ACATCACATC ACGCAACATC TGCCAGTAAC TTTCTTTTGA TTTTTTTTTC
GGTTTATTTT TCGTATTTAT TTATTTCAAT CAAGATGTTA ACAGCTGAAT TATTTTAAAA AAAATCAGCT TCTAATTGAT
CATTCTGGTG AAGTGCTAAA 

>Vigan.06G256400.01
ATGGAAGAAC GGAAGCAATC GCGTTATGTG AAGTTGACCA AAGATCAGAC ACCTGTCGAA GATATTACCC CTGGCGAACT
CAATCAGCCA ATACAGGTTC CTCAGTTGGA TGTTCGCAAG TGCCCTGAAT GCAGACAGCC GCTACCTGAA AGTTATGCAC
CTCCTGCAGA TGAACCTTGG ATGACTGGGA TCTTTGGATG TGCTGAAGAC AGAGAAAGCT GCTTGACTGG ACTGTTTTGT
CCTTGTGTAT TATTTGGGCG CAATGTAGAA AGATTGAAGG AAGACACTCC TTGGACTGGG CCATGTATTT GTCATGCCAT
TTTTATTGAA GGTGGCATTT CTCTGGCAAT AGCAACTGCA GCTGCAACTT CCTTCTTTCC TGTTGACCCA GGGACTGTAT
GTCTCATTGT TGAGGGTTTA TTTTTTACAT GGTGGATGTG TGGCATTCAC ACTGGTCAAG TGCGGCAATC CTTACAGAAG
AAATATCACT TGAAGAATTC ACCGTGTAAT GCATGTTGTG TGCATTGCTG CTTGCACTGG TGTGCCTTGT GTCAGGAACA
CAGGGAGATG AATGGAAGGC TCTCAGACAA CATGTTTTCA GAAATGACCG TTGTAAACCC TCCTCCCATT CAAGAGATGA
AATCTACAGA TGAGAAGGAA ACTGCTGAAA CGTCTTCACC CAACAACAAC GATCATACTG ATTTGGAGAT ACAGGCTGTA
TAA

>Vigan.06G256400.01
MEERKQSRYV KLTKDQTPVE DITPGELNQP IQVPQLDVRK CPECRQPLPE SYAPPADEPW MTGIFGCAED RESCLTGLFC
PCVLFGRNVE RLKEDTPWTG PCICHAIFIE GGISLAIATA AATSFFPVDP GTVCLIVEGL FFTWWMCGIH TGQVRQSLQK
KYHLKNSPCN ACCVHCCLHW CALCQEHREM NGRLSDNMFS EMTVVNPPPI QEMKSTDEKE TAETSSPNNN DHTDLEIQAV
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