GBrowse Details

Vigan.06G153100.01

Basic Information:
Name: Vigan.06G153100.01
Multiple alignment
Variant Information
Position: Chr06:28458714..28463665 (+ strand)
Length: 4952
Functional Information:
Description: Similar to Uncharacterized protein. [I1LRP3, Glycine max]
GO: Biological Process: intracellular protein transport (GO:0006886)
Cellular Component: endoplasmic reticulum (GO:0005783)
Cellular Component: integral to membrane (GO:0016021)
InterPro: B-cell receptor-associated 31-like (IPR008417)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.00,8.72,12.97,8.07,15.80,16.26,18.87,10.26
Automatic updates:
Name: NM_001252725 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100798727 (LOC100798727), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001317695 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max B-cell receptor-associated protein 31-like protein (LOC100820199), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:28458714..28458883 (+ strand)
Length: 170
Type: five_prime_UTR
Position: Chr06:28458884..28459166 (+ strand)
Length: 283
Type: CDS
Position: Chr06:28463025..28463389 (+ strand)
Length: 365
Type: CDS
Position: Chr06:28463390..28463665 (+ strand)
Length: 276
Type: three_prime_UTR

>Vigan.06G153100.01 class=Sequence position=Chr06:28458714..28463665 (+ strand)
GAAAAATGAA GTTTTGAATA CAGAAAATTC CAAACACATG CATGATGACG CCTCATTGGA CCAACACATT TCCTCGTTGA
ATCCACCCCT TTTTCTCCTC TTCGTCTCTC TCAACACCGC TTTCTTCTGT TCCTAATTCT AGTCTCTTCT TCCAAAGTGA
TTCAAAGAAG ATGTTGCAAT TACTCTACAC TGCGATTTTC AGCGAAATGC TTCTGATTCT CACCCTAGTT TTTAAGACCC
CTCTCAGAAA ACTGGTCATC ATTTCCCTCG ATCGGGTCAA ACGCGGCCGT GGCCCCATCG TTGTGTCCAC CGTGGGCGCC
ACATTGGTGG TGGTTCTCTC TTCCAGCCTC TACAGCATGG CCAAGATCCA GCAACGCATC CTCGAGGCCG GTATACTCAA
CCCCACCGAC CAAGTTCTTA TGTCCAACCA CATGCTCGAA GCCTCTCTCA TGGGTATGTC TCACAAACCT TTCGTTTCTA
AACTCAAATC TCTCTTTTCT AGGGTTTATG AGATTAGATT AAATTGTTTG AGTTATTTAA TTATTTATTT TTGTCCGTGG
AACAAAGGAG TACTATGGAC GACTAAATAT TTAACTTCGA ATTGATTTGT GATGGAGTGA TTGTGGGTTT TTGTGCTCTT
ATCCATATAT GAGGTTACAG TGATTGATGA ATTTTTAGGA AATTCCGTTG TATTGTTTTT TAAGGTTTAA TTACTTACTC
ATTTGGTCTC GATATCTTTA TATCTGAACA ATCTTTACGT TTTAGTTCTT GTATTTAGAA AGTACTCGAC TTTGTCCCAA
CGTATAATAT GGATTCCCGT TTATATATTG GTTGGTTCTT CAGTCCTACT TGCTGTTTTA CACAGGTCTG ATTTACGTGA
CAAATGGTGC ACGTGGGTTT CACTTCGTAT CTTATTTAGT AATGTTAGAA TTATAAGTTG TGTGTGAGTG AGTATGAGTT
GTGTGTGAGT GGGCATGAGT GTGTTCCAAC TAATCTTAAC TGGTTGTAGT CAGCATCTTT TTCTCCTATA AATGTAACTT
GAATAAGCTC TCTAGAAATA TATTCTCTGT TTTTAGTCTC AAGTAGTAAT TAGCGTAGAA TGATTCAGTA TTTGGCAGGT
TGTTTCAAAC TTTCATGTGA ATGGGTTTTT ATTTCGGGTA GAGTGGTTAA AGATAAGGGG ATGTAGAATC ACTGAAATAG
TCATCAGCTT ACCTTATAAT ATTGATTGCT TGAAATTTTA AGAGTGTTTG ACAGTTATAA TAATTTCAAT TTTCTATTTG
AATTTGAATT TGAATTGTGA GATGTTAAGA AAATATTTGG TATGGATAAT CATAATAAAG AATGGAAAAT TATGAAATCA
TGACAAAAAG AGGGAAGAAA AAACAAGCAA GTGATGTGGT TTAGTTGCCC ATTTCAGTTA TTTATTTGTT TCATAATAGT
GCTTTCAAAC TACATATCTG AAGAATAAAG TGATGGTATG GTGTATCACT ATTTATTGTG CATTCTTTAA TATGACTAAC
TATTATCAAG GCTTCGGATG GACTTCTCAT CATGCCCAAA CCATGTCATA TGAGACTCTA GTCTTTCTTC CTCAATAGGT
GTTTGCTTCT ACATTCTTTC CAATACATCC AATCGTCTTA TTTTCTTATT TTCATCTATT CTACATTTAG GTTATGATCT
TGTTGGTACA TATTTTTGTT GTGAGATAAA ATTACCATGA TAGGAATGAG TCACTTGAGT GCCCAAGAAA TATTTCAATC
TGCCTAACTC CTTAATTTAA AATCGGTTAT CAAACATTTT TGTAAGGCTT TCAGTCCTAC CTGATCATTT CCTAACTATA
TAATCTATTT AGGCAATTAG TGCCGTAACA ACCCCTGAAG CTGAATGCTT AATGATCACC TTGGCTTTGC TTGTACCCCA
TGGTCTTCAT CAGTAGTAAA CATGCCAAAC CATGCACTAG GAGACTGGTT CAATCCATAG AATGCCTTAC TTAGTTTACA
CACATTTCCC GTCTCGGCTT TAAACCTTGG TGGGACCTGC ATGTAAATTT CTTCCTTGAG ATTGTCATGC AGAAAGACAT
TTGTGACATC AAACTGCTGC AAACACCATC CATGGTTAGC TGCGAGAGAC AATAGAATTC TAACAGTATT CATTTTTTTA
ACAGGTGAAA AAGTTTCAAA ATAGCCAATC TCATATGTTT GACTATATCC CTTGGCTACT AACCTTGCCT TATACCTTTC
TAATGTCGCA TTTGCCTTGT ATTTAATAGT GAATACACAC CTACATCCAA CAAGATTTTT TCCTTCAGGT ACATCCTCCA
ACTCCCAAGG TTTGTTCTTT TCTAGAGCAA CCATTTCAGT CTTAATAGCA TTTTTCTAGT CCTTATTGTT CAATGCCTTA
TCCAAACCTT TTGGAATAGT GACAGTATTT AGATGGCCAA GAAAGCTTTT TTTGACTACT GGATAGTTTG TCATCAGAAA
GTGTGACAAT GGGTACCTTG GCTTTTGAGT ACATGCTTTG ACACCTTTCC TTACTGCAAT TAGAAGATCC TGACTTTCAA
TGGCTGCCAT ATTCAGTTCT TCACTAATGT CTCGTATTTC AGGTATAGGT TCAAATTCAT GGACTTATGG TGATTGAATA
ATAGACTTTG TCCTTTTTCA CCAATGAGAC TTAATTTTCG GAAAATGAGG TTTTCTTTCA AGAATGAATT ATCATTATTT
TCCATGCATG AGCTTTCCCC TGAAAATAAG GTTGAAAATA TTGTGTATTT TCATCGCAAC AAGACACAAG GAATTGTTTT
GTTGGAGGAT GGTTAATTTG TATCCCTTTG CGGTAGGTGA GTAACCGATA AATATGCACT CAGTTAAATG AGACTATTAT
TGTTTAGAGT TTTGGAGGCT ATAAGATTGA CCAAATAGGT AGCCATAAGG ACAACTTCTC CCCAATATAC TGATTTGGTT
CATTTTTTAA AGGTGATTTT CAAAGAACCT TAGGCTCTAA TACCATGTTC AATATAATAA AAATTATGTA TGGAATTAAT
ATCTCTTGTG TTGAATATAC ACATAGGGTC TATTTATAAT ACAAGAAATA TGGGTTAAGT CCAAAATATA AATAAAGAAT
AATAATACAC ATAGGGTCTA TTTATACTTT AAGATCATTA ATGAATGTTT CAGCAACTGT AATGAATGTT TCAATTTGCT
CGTGCAATTT TTGTGTTGCT TGGACAAGGT CTATAAGATA TAAACCCAAT AGATGATCGA GTCTTGTAGT CAATGGCTCT
GGAATCAACT ATCCAGACAC CTTCTTTAGA AGAATTTAAG GTATTGAGTG AACAATAGTA ATGAAAATTA CTTGCGGATG
TTAAGGAGCA ATTACCCGAG TCTTTAGGTT TTTGTTAAAG TGTCCAGCAG GCGCATAGTT TTAGAATCTC CTCTGTGCTG
AACTTTTTGG TGAGTCAAGT TTTATGAGTA TCAGACACTT TTGAGGTTTG AACTATGACA ATGCAGGCTG GCACAAGAGA
TTAAACAGGC TCCCAAGGAT TTTAGAGCGT TGATACCTTG TCAAAAAAAT TGTTTCTGAT ATTATTCATA AAGGAGCAAT
TGCTATTAAA TACAATACAT AGATATAATA ACTCAAAATC CTATATGATG GATATAATCT ATCCTTACAA TTCAGGATAG
TGTGATCTTA TACCATAACT ACTAAATATA GTGTTAGCCT ATCAATCCTC CTAGTCATGA AAGGTAATTA AATCATCTAA
CTATGTAATT AAAACTGTAC AAAGAAATAT TAACTCCAGT ATAAATAAGG GTTTCTGACA AATAAGTACA ACCTTGTAAT
AGGTATTTGA TTAACACTGA TGGACAAAAT TCTTTTGAAC AGTGAGAAAG AATAATATTA TAAAATTTAA CTTAGTGGGG
ATAAAAGTAA AGACTTTAAA GCATAAATAA CACACTATAG TAGAGATAAA AATAAATAAA TGGTAGTTAC AAATGGGTAT
ATATCCTTGT TAATTGTCGT CTTTATTTTG CTTTAAAACT GTTAAATTGT AGTGGTGTAT TGTTTTATTG TATTCACTCC
ACTCTCAGTA AGTTCAATAT ATTAGATCTT ATATGCCAGT TTCAAATTTT GGGTTTATAG TCTTCATTTT TGGCTTTTCG
ATGAACTACT ATTTCAAGAT TCGCCATACT TAGATATCCT CTCGTGTGTT TTGTTTTAAG TGCTTTCTAT GTGTTATGAG
GGTCATGAGT TGGATATTTC TTTGTTTACT ATAGTCTTTT CTATTCATAG TTTTGCTTAT AAAATGTGCA GGGTTTTTGT
TGTTCCTCTC TCTGATGATT GATAGATTGC ATCACTACAT AAGAGAGCTT CGTTTACTCA GAAAGGCCAT GGAAGCTATT
AAGAAACAAA GCCGAAGTTT TGAAGATGAC AAAAATGGTA ATACAGAGGA ACTGAAAGCA TTGACAGAAG AAATTGCCAC
ATTGAAGTCC AAAATTAAGA AACTGGAATC TGAATGTGAG ACAAAAGGAC ATGAGGCTAA GTCTTTGGAA ACTGAAGTAG
AAGCTCATAA AAAGCAGTCG GAGGGTTTCC TTATGGAGTA TGATCGCCTG TTGGAAGACA ATCAGAGTCT TCGGAGTCAG
TTACAGGCCC TTGAGAGCTC TTTGCAATCC TCATAATAAA AAGAATATGT GATTTCGTTG AAATATCTAA AATAAAACTC
TATCATTTGT TTAACTACTG TTTGATGCCT CATACTTTCT TAATGAGGTC ACATATGTAT ATAAGTATTT GAAACAGATT
AACCCTGGAT TGAGTGAACT TGTTGCGTTT TAAGCAGCTC ACATTATATA TGAGTTTATT AGCCTATTAT TCTTCATAAG
ATCATCATAA AGGAACAAAT ATTCTTGTCA AAGTTGGGTT TTGAGTTGTT ATATTCATAA CTTGGAAAAT CA

>Vigan.06G153100.01
GAAAAATGAA GTTTTGAATA CAGAAAATTC CAAACACATG CATGATGACG CCTCATTGGA CCAACACATT TCCTCGTTGA
ATCCACCCCT TTTTCTCCTC TTCGTCTCTC TCAACACCGC TTTCTTCTGT TCCTAATTCT AGTCTCTTCT TCCAAAGTGA
TTCAAAGAAG ATGTTGCAAT TACTCTACAC TGCGATTTTC AGCGAAATGC TTCTGATTCT CACCCTAGTT TTTAAGACCC
CTCTCAGAAA ACTGGTCATC ATTTCCCTCG ATCGGGTCAA ACGCGGCCGT GGCCCCATCG TTGTGTCCAC CGTGGGCGCC
ACATTGGTGG TGGTTCTCTC TTCCAGCCTC TACAGCATGG CCAAGATCCA GCAACGCATC CTCGAGGCCG GTATACTCAA
CCCCACCGAC CAAGTTCTTA TGTCCAACCA CATGCTCGAA GCCTCTCTCA TGGGGTTTTT GTTGTTCCTC TCTCTGATGA
TTGATAGATT GCATCACTAC ATAAGAGAGC TTCGTTTACT CAGAAAGGCC ATGGAAGCTA TTAAGAAACA AAGCCGAAGT
TTTGAAGATG ACAAAAATGG TAATACAGAG GAACTGAAAG CATTGACAGA AGAAATTGCC ACATTGAAGT CCAAAATTAA
GAAACTGGAA TCTGAATGTG AGACAAAAGG ACATGAGGCT AAGTCTTTGG AAACTGAAGT AGAAGCTCAT AAAAAGCAGT
CGGAGGGTTT CCTTATGGAG TATGATCGCC TGTTGGAAGA CAATCAGAGT CTTCGGAGTC AGTTACAGGC CCTTGAGAGC
TCTTTGCAAT CCTCATAATA AAAAGAATAT GTGATTTCGT TGAAATATCT AAAATAAAAC TCTATCATTT GTTTAACTAC
TGTTTGATGC CTCATACTTT CTTAATGAGG TCACATATGT ATATAAGTAT TTGAAACAGA TTAACCCTGG ATTGAGTGAA
CTTGTTGCGT TTTAAGCAGC TCACATTATA TATGAGTTTA TTAGCCTATT ATTCTTCATA AGATCATCAT AAAGGAACAA
ATATTCTTGT CAAAGTTGGG TTTTGAGTTG TTATATTCAT AACTTGGAAA ATCA

>Vigan.06G153100.01
ATGTTGCAAT TACTCTACAC TGCGATTTTC AGCGAAATGC TTCTGATTCT CACCCTAGTT TTTAAGACCC CTCTCAGAAA
ACTGGTCATC ATTTCCCTCG ATCGGGTCAA ACGCGGCCGT GGCCCCATCG TTGTGTCCAC CGTGGGCGCC ACATTGGTGG
TGGTTCTCTC TTCCAGCCTC TACAGCATGG CCAAGATCCA GCAACGCATC CTCGAGGCCG GTATACTCAA CCCCACCGAC
CAAGTTCTTA TGTCCAACCA CATGCTCGAA GCCTCTCTCA TGGGGTTTTT GTTGTTCCTC TCTCTGATGA TTGATAGATT
GCATCACTAC ATAAGAGAGC TTCGTTTACT CAGAAAGGCC ATGGAAGCTA TTAAGAAACA AAGCCGAAGT TTTGAAGATG
ACAAAAATGG TAATACAGAG GAACTGAAAG CATTGACAGA AGAAATTGCC ACATTGAAGT CCAAAATTAA GAAACTGGAA
TCTGAATGTG AGACAAAAGG ACATGAGGCT AAGTCTTTGG AAACTGAAGT AGAAGCTCAT AAAAAGCAGT CGGAGGGTTT
CCTTATGGAG TATGATCGCC TGTTGGAAGA CAATCAGAGT CTTCGGAGTC AGTTACAGGC CCTTGAGAGC TCTTTGCAAT
CCTCATAA

>Vigan.06G153100.01
MLQLLYTAIF SEMLLILTLV FKTPLRKLVI ISLDRVKRGR GPIVVSTVGA TLVVVLSSSL YSMAKIQQRI LEAGILNPTD
QVLMSNHMLE ASLMGFLLFL SLMIDRLHHY IRELRLLRKA MEAIKKQSRS FEDDKNGNTE ELKALTEEIA TLKSKIKKLE
SECETKGHEA KSLETEVEAH KKQSEGFLME YDRLLEDNQS LRSQLQALES SLQSS*