GBrowse Details

Vigan.05G260500.01

Basic Information:
Name: Vigan.05G260500.01
Multiple alignment
Variant Information
Position: Chr05:33228016..33232444 (- strand)
Length: 4429
Functional Information:
Description: Similar to Uncharacterized protein. [K7MR25, Glycine max]
GO: Biological Process: transport (GO:0006810)
Cellular Component: membrane (GO:0016020)
Cellular Component: integral to membrane (GO:0016021)
Molecular Function: transporter activity (GO:0005215)
InterPro: Drug/metabolite transporter (IPR000620)
Triose phosphate/phosphoenolpyruvate translocator (IPR004696)
Triose-phosphate transporter domain (IPR004853)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:11.75,10.77,36.61,20.31,139.15,28.96,121.57,64.61
Arabidopsis thaliana homolog: AT1G61800.1, AT5G54800.1
Automatic updates:
Name: NM_001251614 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glucose-6-phosphate/phosphate translocator 1, chloroplastic (LOC732659), mRNA.
PubMed ID: 16101913 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr05:33228016..33228571 (- strand)
Length: 556
Type: three_prime_UTR
Position: Chr05:33228572..33228583 (- strand)
Length: 12
Type: CDS
Position: Chr05:33229355..33229568 (- strand)
Length: 214
Type: CDS
Position: Chr05:33230386..33230608 (- strand)
Length: 223
Type: CDS
Position: Chr05:33230986..33231211 (- strand)
Length: 226
Type: CDS
Position: Chr05:33231623..33232129 (- strand)
Length: 507
Type: CDS
Position: Chr05:33232130..33232444 (- strand)
Length: 315
Type: five_prime_UTR

>Vigan.05G260500.01 class=Sequence position=Chr05:33228016..33232444 (- strand)
GTAAGATTCC AAGGAATCAT TCCCTTTCCT TTTGTTTTTC TTCTATGCTT TTGAGTTTTG TCTTGAATTT TCTGTTAAAA
ATCTTTTTTT TTATATTGTA ATTATTATTA TTCTTGTTAT TATTGTTTTG CAGTGTTTTG GTTTGACATA AGTTAGCCTT
TCAAGATCTC AGAGGGGCAG AAGATCAAAG CCTGGACACA CTCTCATAGA TAAAGAGTGT CTCTGATTTG ATCTTTGTTT
CTTTTCTCCT TGAAAATTTT CAGCACCCCA CAGGGTTCTG TCAGAAAAGT TTGAATTTTG AGCCTGCCCT TTACAATGAT
TTCTTCCTTG AGACAGCCTG TTGTGGGGAT CAGTGGTTCT GATCTTCTTT TGAGGCAAAG ACATGCAACC CCGGTTAAGG
CACGGTCGTT TTTGCCTTGT TTGGCAAGGG AAAAGGGACA GGGATCTCTG GTTTCGGTGC ATAAGCCACT GCACATTGCT
TCTTCTCTTG GTGGTCGAAA TTTTTCTTCA GTGAAGAGTG GTGGAAAGGG TGATTTGGTG AAGTGTGAGG CCTATGAGGC
AGACAGATCA GAGGTTGAGG CTACAAACAC ACCATCAGAG GCTTCAAAGA AGGTGAAGAT TGGCATATAT TTTGCAACCT
GGTGGGCTCT GAATGTGGTG TTTAATATTT ATAACAAGAA GGTGTTGAAT GCCTACCCCT TCCCGTGGCT GACTTCAACT
CTCTCACTTG CATGTGGGTC TCTCATGATG TTGATCTCTT GGGCCACTGG GATTGCAGAA GCCCCCAAGA CTGATCCTGA
GTTTTGGAAG TCTTTGTTCC CTGTAAGTAT CGATTTGGTT GTTTGTTTGT TTGTTTGTTT CTTGAGGAAA AAAATTGATG
TAAGGAAGTG AAAGCTTTGT TTTGTTTGCT CATGTGTTTT TTGTTCTGGA AAAAAAATGT TTTTCTTTTT GACAATTTTG
GATACATGTC TGGATGTCTA TGTTGGTTAA ATCCAGAAAC GTACAAAGTA GAGAAAATTG AGTATGTTCT TATCAAACCT
TGCGGCTGAA TTGGACTGAA TTAATTTTAA GATCTTTGGT TTATCAATTA TAACAGTTTT CTAGTTTTGA AAAAGTGATT
TTACTTTAGC TGGACAATCA GCAAATTTTC TTCATCCACC CTCCTTTATT TATTTATTTA TTAATCATTT TGGAGGGATG
GAGACCTTAG TTCTTGTTTT GTTTGTCCTT CAGGTTGCCG TTGCACATAC AATAGGACAT GTGGCAGCAA CTGTTAGTAT
GTCAAAAGTT GCGGTATCAT TTACACATAT AATCAAGAGT GGTGAGCCTG CTTTTAGTGT TCTGGTTTCA AGATTTCTCT
TGGGTGAGAC TTTCCCCGTG CCAGTCTATC TGTCTTTACT TCCGATCATT GGTGGATGTG CACTTGCAGC CGTGACTGAA
CTCAATTTCA ACATGATTGG TAATGAATTT TTCCTTTGAA GGATTTTGTT TATCCTTAAA ATTGTTGTTA AGCACGGTAA
TAAGATGGAG ATAAGATGAT AAACTGATTT GGAATTTGAC TAGAAAAAAG ATAACCTGTC TGTGTTTAAT TAAATTTGGT
TATGTTTTAG CTATTACTTT TTTCTTTTAG TGTTAGTGAA ACTGGCCTTT ACTACACTTT GTTGTCTATT CTTGCTTGCT
TGAGTTATCT CTCAAGCGCA AGGGTAATTT GTTTATGATT AACTTGAGTA ATGGTGTAAT TAGAGGTCTT CTATTTGAGC
TGAAATGACC TTGTTGTAAA GTTTGCTGCA AGTAGCTCTT CACTCTTCTA ACTTTATTTT CATCATTCTT TTTCAGGTTT
CATGGGTGCT ATGATATCGA ATTTGGCATT TGTATTCCGT AATATCTTTT CAAAAAAGGG AATGAAGGGA AAGTCTGTCA
GTGGAATGAA TTACTATGCT TGTTTATCTA TTTTGTCCCT TGCAATTCTC ACACCCTTTG CAATTGCCGT GGAAGGACCA
CAGATGTGGA TTGCGGGATG GAAAACATCG ATCTCTCAGA TTGGAAACCA ACTCATATGG TAATTTCAAG AAGACTGCAT
ACCGTAATGT TATCCCTTTT GTGTTGTTAT CATGTTCACA CTCATCTCTA TTTCTATTCA TCTCTATTTT CCATGCTCTA
AGGTAATATG TTGAATTTTT CATAATATAT GGTTAGTGTT CAAAGTTCAT TTGTTTTTGA GTGAAATATT TAACAACAGT
ATGGGGGAAG GTGGTGTTCC TGGTCCCAAT TCCTGACCAT CAATCTGAAG ATGACTTGAG TAGTTGGTAG TTATTTTCAT
CATCTTTATG GTTAATAAAA TTGAATGTTT TGTAGCTGTT CGGGGTCAAC TTGATAGTTT GTAATTTTGA TGTGACTGGG
ATATTTGGAT CTCTCCCAGT GTTGGAGATT CTGCATTAAA TGCTTTATGC AGTTGGCTTG CATATTTATA CCTTGGTTGA
AAATATAAAC TAACTTCAGA GATTCAATGT ATATATAGAA TGCATGAGAA CATGTACTCT TGGATAGAAG ACACCAATGT
CAACTTCCTT AGTCTTCTCT GCCACTAATT GATGATCATG TCCCTATGCT AATTTAAGGC TTGTGGGTTG ATAGATCCTC
TGTGCTGGGC AATGTACTGA TTATCAAATA CCTGATTCTT TTTTTTTTGT GTGTTGTTAT CTGAAGAACA GCTTACACCT
TTTGTAAAGT TTAGTTTTAA CATTTTAACG AAACATCTGA CTTCAATTTC TTCATTCTGA TTGAGCTGTC TCTTGTTTGT
GCTCTTTGTC TTGTGATCAT AAGCTTCTGC TCTCAATATT ATGCCTAAAT TTTTGGCTGG TAATTGTACA CGACAGGTGG
GTAGCAGCTC AAAGTGTATT CTATCACTTA TACAATCAAG TGTCATACAT GTCTCTAGAT GAGATCTCTC CCTTGACATT
TAGCATTGGA AACACCATGA AACGTATATC TGTCATAGTG TCTTCGATTA TTATCTTCCA CACTCCAGTT CAACCTGTTA
ATGCTCTTGG TGCCGCTATT GCTATCCTTG GAACCTTCTT ATATTCACAG GTATTTTCTG TTCTTCACCT TTTAATGTTA
TGTTTATCAT TGTTTATTAG GCAGGCGATA TTTTTACCAC CAAAAGAAAA ATGTTATTTA TATTTGAAAC ATCAAACACA
CACTGTGTTA CCTATTATAC TGGACCGAGG GTCCATTAGA GAGATAATGT GTTTAGGTTG ATTGTTGATA GTCATTTATG
TGAACTGGAA CCCTTTGCAT TGTTATTTTG TCTGATCTGC AAACTGTCAA ATTTTAAAAG GGTTTTTGTG TCTGATTTGG
TGAGAGTTTA CCATGGAGAA AAAACATGGT TCATAGGGTG GAGTTGGTTA TGAATGTTTT TACCTTCCAA TCTAATGAAT
GATATTCTGC TGAAGTTAGG TGATCCAAGT TTTATTGGTG AGTAGCCTCT TAAATTGCCA CCTAACTCCT TTGGTTCTTA
CATTGAACCT ACCTATACAA CTTCTTTTCA AAGTCAATTT TCAACATAAG TTAGCTTACC TTGTAGACTT ACCAAAGTTG
TCCACGCCAT ATACTTTTGC ACATGCTTTT TGGTTCATAC CTTCACAATG AGGCTTCTAA TGAAAGCATC TTTGGCATGT
TCCTTGAAAA TGTCAGGTGG GTGGGAATCT TAGAAAATTG AGAAAAAAAA AGGTTAAAAA CAAAAGAGAA TAACAATCAG
ATTACCAGTT TCTTTAAGAT AAACAAACAT GTGGTTTTCT TTCTGAAATA ATGATTTTGT TTGGTAGGTA TACTTATTTC
ATATTCTTGT GTGTCCTGCA GGCAAAACAA TAGATTTGGT GGACTAAGAT TCCTCTATGG ATTTGTTTGT TACCGTTCTT
CATGCTCAAC CAGGGGCAAG AAAGTTAAAT TTGGAATGTG TCACTGCTGG ATTTTTGCAA GACTAGGATG CTCTGGCTGT
CAGTCCATCT GTAGATAGAT ATAATAATAA GGATGATGCT GCTGAGGAAA CATTATTATA ATACAGATTA TTGTTATTAT
TAGGTAGAGT TTTTTTTTTT TTTTCAATTT CTGACATGCC TACGATTTGA AATAAATGTT TTTGAGAATA ATCTCTCAAA
ACATTGTTTT CTGTAAGGAG CATGCAATAA TGTGATGAAT CCCATGATGA ATTTGAGTGT CAGAATATAT AAATGTTTGA
TGTTGTGAGT GAATATGGTC CTTCCATTTC TATGCCCTTT GACCCTTTCC ATGTGATGGT TGTTTGCTTT CTGTAGTGAG
AAAGTGACTC TTCACTTTTC TAAAGGACAT GTTCTCATTC TTCATGTCTA TGTTCATCGT TGATATTTGA AACCTAATTC
ATAGAATAAT TAATCAGAGA ATATTCGAG

>Vigan.05G260500.01
GTAAGATTCC AAGGAATCAT TCCCTTTCCT TTTGTTTTTC TTCTATGCTT TTGAGTTTTG TCTTGAATTT TCTGTTAAAA
ATCTTTTTTT TTATATTGTA ATTATTATTA TTCTTGTTAT TATTGTTTTG CAGTGTTTTG GTTTGACATA AGTTAGCCTT
TCAAGATCTC AGAGGGGCAG AAGATCAAAG CCTGGACACA CTCTCATAGA TAAAGAGTGT CTCTGATTTG ATCTTTGTTT
CTTTTCTCCT TGAAAATTTT CAGCACCCCA CAGGGTTCTG TCAGAAAAGT TTGAATTTTG AGCCTGCCCT TTACAATGAT
TTCTTCCTTG AGACAGCCTG TTGTGGGGAT CAGTGGTTCT GATCTTCTTT TGAGGCAAAG ACATGCAACC CCGGTTAAGG
CACGGTCGTT TTTGCCTTGT TTGGCAAGGG AAAAGGGACA GGGATCTCTG GTTTCGGTGC ATAAGCCACT GCACATTGCT
TCTTCTCTTG GTGGTCGAAA TTTTTCTTCA GTGAAGAGTG GTGGAAAGGG TGATTTGGTG AAGTGTGAGG CCTATGAGGC
AGACAGATCA GAGGTTGAGG CTACAAACAC ACCATCAGAG GCTTCAAAGA AGGTGAAGAT TGGCATATAT TTTGCAACCT
GGTGGGCTCT GAATGTGGTG TTTAATATTT ATAACAAGAA GGTGTTGAAT GCCTACCCCT TCCCGTGGCT GACTTCAACT
CTCTCACTTG CATGTGGGTC TCTCATGATG TTGATCTCTT GGGCCACTGG GATTGCAGAA GCCCCCAAGA CTGATCCTGA
GTTTTGGAAG TCTTTGTTCC CTGTTGCCGT TGCACATACA ATAGGACATG TGGCAGCAAC TGTTAGTATG TCAAAAGTTG
CGGTATCATT TACACATATA ATCAAGAGTG GTGAGCCTGC TTTTAGTGTT CTGGTTTCAA GATTTCTCTT GGGTGAGACT
TTCCCCGTGC CAGTCTATCT GTCTTTACTT CCGATCATTG GTGGATGTGC ACTTGCAGCC GTGACTGAAC TCAATTTCAA
CATGATTGGT TTCATGGGTG CTATGATATC GAATTTGGCA TTTGTATTCC GTAATATCTT TTCAAAAAAG GGAATGAAGG
GAAAGTCTGT CAGTGGAATG AATTACTATG CTTGTTTATC TATTTTGTCC CTTGCAATTC TCACACCCTT TGCAATTGCC
GTGGAAGGAC CACAGATGTG GATTGCGGGA TGGAAAACAT CGATCTCTCA GATTGGAAAC CAACTCATAT GGTGGGTAGC
AGCTCAAAGT GTATTCTATC ACTTATACAA TCAAGTGTCA TACATGTCTC TAGATGAGAT CTCTCCCTTG ACATTTAGCA
TTGGAAACAC CATGAAACGT ATATCTGTCA TAGTGTCTTC GATTATTATC TTCCACACTC CAGTTCAACC TGTTAATGCT
CTTGGTGCCG CTATTGCTAT CCTTGGAACC TTCTTATATT CACAGGCAAA ACAATAGATT TGGTGGACTA AGATTCCTCT
ATGGATTTGT TTGTTACCGT TCTTCATGCT CAACCAGGGG CAAGAAAGTT AAATTTGGAA TGTGTCACTG CTGGATTTTT
GCAAGACTAG GATGCTCTGG CTGTCAGTCC ATCTGTAGAT AGATATAATA ATAAGGATGA TGCTGCTGAG GAAACATTAT
TATAATACAG ATTATTGTTA TTATTAGGTA GAGTTTTTTT TTTTTTTTCA ATTTCTGACA TGCCTACGAT TTGAAATAAA
TGTTTTTGAG AATAATCTCT CAAAACATTG TTTTCTGTAA GGAGCATGCA ATAATGTGAT GAATCCCATG ATGAATTTGA
GTGTCAGAAT ATATAAATGT TTGATGTTGT GAGTGAATAT GGTCCTTCCA TTTCTATGCC CTTTGACCCT TTCCATGTGA
TGGTTGTTTG CTTTCTGTAG TGAGAAAGTG ACTCTTCACT TTTCTAAAGG ACATGTTCTC ATTCTTCATG TCTATGTTCA
TCGTTGATAT TTGAAACCTA ATTCATAGAA TAATTAATCA GAGAATATTC GAG

>Vigan.05G260500.01
ATGATTTCTT CCTTGAGACA GCCTGTTGTG GGGATCAGTG GTTCTGATCT TCTTTTGAGG CAAAGACATG CAACCCCGGT
TAAGGCACGG TCGTTTTTGC CTTGTTTGGC AAGGGAAAAG GGACAGGGAT CTCTGGTTTC GGTGCATAAG CCACTGCACA
TTGCTTCTTC TCTTGGTGGT CGAAATTTTT CTTCAGTGAA GAGTGGTGGA AAGGGTGATT TGGTGAAGTG TGAGGCCTAT
GAGGCAGACA GATCAGAGGT TGAGGCTACA AACACACCAT CAGAGGCTTC AAAGAAGGTG AAGATTGGCA TATATTTTGC
AACCTGGTGG GCTCTGAATG TGGTGTTTAA TATTTATAAC AAGAAGGTGT TGAATGCCTA CCCCTTCCCG TGGCTGACTT
CAACTCTCTC ACTTGCATGT GGGTCTCTCA TGATGTTGAT CTCTTGGGCC ACTGGGATTG CAGAAGCCCC CAAGACTGAT
CCTGAGTTTT GGAAGTCTTT GTTCCCTGTT GCCGTTGCAC ATACAATAGG ACATGTGGCA GCAACTGTTA GTATGTCAAA
AGTTGCGGTA TCATTTACAC ATATAATCAA GAGTGGTGAG CCTGCTTTTA GTGTTCTGGT TTCAAGATTT CTCTTGGGTG
AGACTTTCCC CGTGCCAGTC TATCTGTCTT TACTTCCGAT CATTGGTGGA TGTGCACTTG CAGCCGTGAC TGAACTCAAT
TTCAACATGA TTGGTTTCAT GGGTGCTATG ATATCGAATT TGGCATTTGT ATTCCGTAAT ATCTTTTCAA AAAAGGGAAT
GAAGGGAAAG TCTGTCAGTG GAATGAATTA CTATGCTTGT TTATCTATTT TGTCCCTTGC AATTCTCACA CCCTTTGCAA
TTGCCGTGGA AGGACCACAG ATGTGGATTG CGGGATGGAA AACATCGATC TCTCAGATTG GAAACCAACT CATATGGTGG
GTAGCAGCTC AAAGTGTATT CTATCACTTA TACAATCAAG TGTCATACAT GTCTCTAGAT GAGATCTCTC CCTTGACATT
TAGCATTGGA AACACCATGA AACGTATATC TGTCATAGTG TCTTCGATTA TTATCTTCCA CACTCCAGTT CAACCTGTTA
ATGCTCTTGG TGCCGCTATT GCTATCCTTG GAACCTTCTT ATATTCACAG GCAAAACAAT AG

>Vigan.05G260500.01
MISSLRQPVV GISGSDLLLR QRHATPVKAR SFLPCLAREK GQGSLVSVHK PLHIASSLGG RNFSSVKSGG KGDLVKCEAY
EADRSEVEAT NTPSEASKKV KIGIYFATWW ALNVVFNIYN KKVLNAYPFP WLTSTLSLAC GSLMMLISWA TGIAEAPKTD
PEFWKSLFPV AVAHTIGHVA ATVSMSKVAV SFTHIIKSGE PAFSVLVSRF LLGETFPVPV YLSLLPIIGG CALAAVTELN
FNMIGFMGAM ISNLAFVFRN IFSKKGMKGK SVSGMNYYAC LSILSLAILT PFAIAVEGPQ MWIAGWKTSI SQIGNQLIWW
VAAQSVFYHL YNQVSYMSLD EISPLTFSIG NTMKRISVIV SSIIIFHTPV QPVNALGAAI AILGTFLYSQ AKQ*