GBrowse Details

Vigan.05G194200.01

Basic Information:
Name: Vigan.05G194200.01
Multiple alignment
Variant Information
Position: Chr05:17393290..17396680 (- strand)
Length: 3391
Functional Information:
Description: Similar to Uncharacterized protein. [I1N070, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: BTB/POZ-like (IPR000210)
BTB/POZ fold (IPR011333)
BTB/POZ (IPR013069)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.80,0.59,5.47,6.38,19.56,2.97,8.85,16.57
Arabidopsis thaliana homolog: AT1G55760.1
Automatic updates:
Name: KM399459 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max BTB/POZ domain-containing protein mRNA, partial cds.
PubMed ID: 25249442 NCBI(pubmed)
Status: Known Variant
Name: KM399469 NCBI(nuccore)
Organism: Medicago truncatula
Description: Medicago truncatula BTB/POZ domain-containing protein mRNA, partial cds.
PubMed ID: 25249442 NCBI(pubmed)
Status: Known Variant
Name: KM399477 NCBI(nuccore)
Organism: Phaseolus vulgaris
Description: Phaseolus vulgaris BTB/POZ domain-containing protein mRNA, partial cds.
PubMed ID: 25249442 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr05:17393290..17393559 (- strand)
Length: 270
Type: three_prime_UTR
Position: Chr05:17393560..17394162 (- strand)
Length: 603
Type: CDS
Position: Chr05:17394420..17394538 (- strand)
Length: 119
Type: CDS
Position: Chr05:17394830..17394975 (- strand)
Length: 146
Type: CDS
Position: Chr05:17395282..17395400 (- strand)
Length: 119
Type: CDS
Position: Chr05:17395401..17396680 (- strand)
Length: 1280
Type: five_prime_UTR

>Vigan.05G194200.01 class=Sequence position=Chr05:17393290..17396680 (- strand)
TAATTCCATA TATTTTTCTT CTCTCTGAAG TTAAAAGGTA CACCAAAAAT TCAACTTTGG TTGAACTACA GTTACATTAG
GTTCCTGTTG CATCCACCAA GGTCAACTTG CAAGTGAGTC ACAGGTCTAC TTGCAGCAGC AGAAAAAAGG GTATGGGAAG
AACTGAAAAA AAATGGATTT TTCAGTGGAT TCATTACTGC AGAGTCTGGC CCATTTCAGA AGAAAATTCT GCAATTTGCA
AGTGAAGGGG AACTGAGATC AACCAACCAT CACACTACAC TGATGCAAGA CACTGTTGAA ATGATGAAAT GAAGCATGCC
ACAGCATTGG TTATATCAGC ATCAGAGTCA CACAAAATTA AATATCACAA GACCAAAGGT TGCACCACGG GACACGTGGA
GAGAGAGAGA GTCAATAGGT TGATCCAGAC ATCAAACTAT GCTTTGGGGG ATAAGTACAA GTGTTATGTT ACACTGTTTT
GAATATCTCT TCATTCATTT TTGTATTATT GAGGATGTTA TCAAAGGTTT CAAAGTTCAA AGACACTTTT ACTGATAACA
TTAACTGCAA TGAAAGAAAC ATACACGTTA CACTTAGATT TTTAAGTTTG ACAATATTAT AATTAGTGAA GTTTAATAAT
GCAAGAGATG AAGTGTTATT TGTGAGGAAA GTATGTTGCA TCCACAATCC AAGAATGTGG TTTTGAGAAA TTGGTTAGAT
TTGGAAGGAA CAGATACTTT GCTTCAAAGC ATAAAAAATT AAAAAATTCT TTTCCCTTTA AAGCAGTCTC ATAAATGACC
CAACCAAAGG GTCATCCTGA ATCAACACAA AATCCAACAC GTATACCTTC TTCATCCCCA ATGATATAAG CAATATGTGT
TAAGACTTAT AGACATTTAT CAGCATAGGC CATCACCATC CCATACCAAT AAAAGTACAA ATCACTCTCT CTCTTTTGTT
TCTTTTAATC TCCAAAAAAA AAGGGTAAAA GCAACACCAA AATCCTTGCG TGTCCGAAAC CTCTCAAAGA AATTGCAACC
TAATCAAAGA CAGCGTGAAT GTTGTTGAAC ACTTTCTGAA ATTTTGGGGG AGTTTGAAAT AAATAAAAGA AGAAAAACAG
AGTGGGGGGA AACAGAGTGA GGAAACAGAG GATATTCATA TGAAGAGTGA AGTGAGCTGG AGAAGAAAGA GTCAACCTGG
GAAAGCCGGG AGAGTTTTTG CTGGAGGGAA TTTTGGATTG CATCCATGAA ATCACCACAG CACTTGCTTT TGCTGATAGG
ATGAGCGATT CTGCATACAG AGTCGAAACC ACACCACGCC TTGCTCAATG GAGAATCGAA AACTTGGCTT CTTGCACTTA
CCGAAAATCC GATCCTTTCA AGATCGGAAA GTGGAACTGG TATTTCTCTA TTCATCTGTA TGTTTATTTG TCCGTTTCTT
AAAAAAAGAA AGTGATCATG TTTCATTTAA AGAACAGAAG ACTCACAAGT GGGGTTGTGT TGTTTGATCA GCAGATTATG
CAACACCCCA CGTGGTTTAA TTGGTTTTGG TGTGTGATGA GTGTTTGGTA CCTCAGAAAG TTTGTTTTTT TGCGCTGAAA
TTTGAAGACC CTTGTTTTAG ATTTTGTGTT GTTGATTTGG TGTCATATTG GAACAAAGAG TGTGGTTTTG ATTTTTGTAT
ATATGTTTTC TGGTTTGAAA TGAAGGCATT TGTCTGTGGA GAAGAACAGG GTTTTGTTTG TTAAATTGTT TCCAGAAATA
TCGAATCTTA CAAGAGACAA CCCTCCAATT GCATCTTTCA TCATTCGGGT TGTAAGTTCT GTTGGAGATC GCAGGGCCAT
CATACACCCA GGTCTTGTTT CTTTTTACCT TTTCTCTCTT TTTTGTTGGT TCATTTTACT TTTTCTTCTG GATAGAAAAT
AATCAATAAT CTTAGATTAT GCGTTTATTA GTATGATGTT GTTGTAGTTG GTCCAAAGTG CATGATAATT GCAAATAGAA
GACAATATGG CTTATCTTAT GCCACTTTGT TTGCTTTTTC ACAATTTCTC AAAACTGTTT TTGCTGACAA GTTCTGATCA
ACAGTTTCTT CCTCATATTG ACTGAGTACA TGCATGAATC TGCTCTTTTT TATATGTTGC AGAAATAAAG GACAAAGTTC
TAAAGAACAA CGAGGATTTT GTTTGGGCAA TTGAGGTTCC ACTAACTGGG AAATTCATTA TTGACGTTGA GTTTCTAGAT
TTGAAGACTG CATCCCCAAA CGTATGTTCT AAATACACAT TTCTTTATAT ATGGTTGTTT CTTTAGTGTT TATTGCAAAT
GATGATCATT TCAAGGCTTT GTAATCCACA GTCATAATCA TGAGCACTTA ACTAAATCCT TCATCTGGCA TTATGGAAGA
TCATCAATAA TAAGCATGAA GATTGGTGAC AATGGATTAG TACCTACAAA GTAGAAATCT TTTTACACTG ATCATGCATA
TACCTTATCT TAACTTGGAA TGTTATATCT GAATGCAGAG TGGAGAACCT TGTTCCATTT GGGCAGAAGG ATTTACTCAG
CAAAGATCAA ATGCAAATGC CATAGAGTGT CTTGGTAGAA TGCTAACAGA AGGAATCCAC ACTGACATCA CCATCAATGT
TTCTGATGGA AGTATTGGAG CTCATAGAGC TGTTCTTGCT GCAAGATCAC CCGTATTCCG CAGCATGTTT TCACATAATC
TTCAAGAGAA AGAGTTGTCA ACCATAAACA TTTCAGATAT GTCACTTGAT TCATGCCAGA CTTTTCTCAA TTATCTCTAT
GGAATCATCA AACATGAAGA GTTTCTGATG CATAGGCTGG CCCTTCTTCG TGCAGCTGAC AAGTATGACA TATCTGATCT
AAGAGATGCA TGCCATGAGA GTCTTCTTGA AGACATTGAC ACAAAAAATG TACTTGAGAG GCTCCAAAAT GCTTCTTTAT
ATCAGTTGAT GAAACTGAAG ATGACTTGTA TCCGGTATCT TGTGAAGTTT GGAAAAATAT ATGAAATCCG TGATGATTTC
AACACCTTCT TGCATAATGC AGATAGGGAT CTGATTGCCG AAGTCTTCCA TGAAGTTCTT GATGCTTGGA AAGGATTTTG
AAGATATGGC AACTTCAAAC AAGTATAGGA AGACATGGTG TTACATAACA TACTCAAGAA ATAGGTTGTT GTTTCGATTT
GTTGTGCAGG ATTTGTTTTC ATGAACCTAA TTCTTTCGCT TAGATGGATT ACTTTTACGA TTTTATGTAC ATTCTTATGT
TGTGGTCTTC AAACGTAAAC CACAAGTCAT TATTGTTTAC AGAGAATGTA AATCATATGA AAGGAAAAAA AAACATATGT
TTATAAATGC AAATGGATCT GAATTGTGAT G

>Vigan.05G194200.01
TAATTCCATA TATTTTTCTT CTCTCTGAAG TTAAAAGGTA CACCAAAAAT TCAACTTTGG TTGAACTACA GTTACATTAG
GTTCCTGTTG CATCCACCAA GGTCAACTTG CAAGTGAGTC ACAGGTCTAC TTGCAGCAGC AGAAAAAAGG GTATGGGAAG
AACTGAAAAA AAATGGATTT TTCAGTGGAT TCATTACTGC AGAGTCTGGC CCATTTCAGA AGAAAATTCT GCAATTTGCA
AGTGAAGGGG AACTGAGATC AACCAACCAT CACACTACAC TGATGCAAGA CACTGTTGAA ATGATGAAAT GAAGCATGCC
ACAGCATTGG TTATATCAGC ATCAGAGTCA CACAAAATTA AATATCACAA GACCAAAGGT TGCACCACGG GACACGTGGA
GAGAGAGAGA GTCAATAGGT TGATCCAGAC ATCAAACTAT GCTTTGGGGG ATAAGTACAA GTGTTATGTT ACACTGTTTT
GAATATCTCT TCATTCATTT TTGTATTATT GAGGATGTTA TCAAAGGTTT CAAAGTTCAA AGACACTTTT ACTGATAACA
TTAACTGCAA TGAAAGAAAC ATACACGTTA CACTTAGATT TTTAAGTTTG ACAATATTAT AATTAGTGAA GTTTAATAAT
GCAAGAGATG AAGTGTTATT TGTGAGGAAA GTATGTTGCA TCCACAATCC AAGAATGTGG TTTTGAGAAA TTGGTTAGAT
TTGGAAGGAA CAGATACTTT GCTTCAAAGC ATAAAAAATT AAAAAATTCT TTTCCCTTTA AAGCAGTCTC ATAAATGACC
CAACCAAAGG GTCATCCTGA ATCAACACAA AATCCAACAC GTATACCTTC TTCATCCCCA ATGATATAAG CAATATGTGT
TAAGACTTAT AGACATTTAT CAGCATAGGC CATCACCATC CCATACCAAT AAAAGTACAA ATCACTCTCT CTCTTTTGTT
TCTTTTAATC TCCAAAAAAA AAGGGTAAAA GCAACACCAA AATCCTTGCG TGTCCGAAAC CTCTCAAAGA AATTGCAACC
TAATCAAAGA CAGCGTGAAT GTTGTTGAAC ACTTTCTGAA ATTTTGGGGG AGTTTGAAAT AAATAAAAGA AGAAAAACAG
AGTGGGGGGA AACAGAGTGA GGAAACAGAG GATATTCATA TGAAGAGTGA AGTGAGCTGG AGAAGAAAGA GTCAACCTGG
GAAAGCCGGG AGAGTTTTTG CTGGAGGGAA TTTTGGATTG CATCCATGAA ATCACCACAG CACTTGCTTT TGCTGATAGG
ATGAGCGATT CTGCATACAG AGTCGAAACC ACACCACGCC TTGCTCAATG GAGAATCGAA AACTTGGCTT CTTGCACTTA
CCGAAAATCC GATCCTTTCA AGATCGGAAA GTGGAACTGG CATTTGTCTG TGGAGAAGAA CAGGGTTTTG TTTGTTAAAT
TGTTTCCAGA AATATCGAAT CTTACAAGAG ACAACCCTCC AATTGCATCT TTCATCATTC GGGTTGTAAG TTCTGTTGGA
GATCGCAGGG CCATCATACA CCCAGAAATA AAGGACAAAG TTCTAAAGAA CAACGAGGAT TTTGTTTGGG CAATTGAGGT
TCCACTAACT GGGAAATTCA TTATTGACGT TGAGTTTCTA GATTTGAAGA CTGCATCCCC AAACAGTGGA GAACCTTGTT
CCATTTGGGC AGAAGGATTT ACTCAGCAAA GATCAAATGC AAATGCCATA GAGTGTCTTG GTAGAATGCT AACAGAAGGA
ATCCACACTG ACATCACCAT CAATGTTTCT GATGGAAGTA TTGGAGCTCA TAGAGCTGTT CTTGCTGCAA GATCACCCGT
ATTCCGCAGC ATGTTTTCAC ATAATCTTCA AGAGAAAGAG TTGTCAACCA TAAACATTTC AGATATGTCA CTTGATTCAT
GCCAGACTTT TCTCAATTAT CTCTATGGAA TCATCAAACA TGAAGAGTTT CTGATGCATA GGCTGGCCCT TCTTCGTGCA
GCTGACAAGT ATGACATATC TGATCTAAGA GATGCATGCC ATGAGAGTCT TCTTGAAGAC ATTGACACAA AAAATGTACT
TGAGAGGCTC CAAAATGCTT CTTTATATCA GTTGATGAAA CTGAAGATGA CTTGTATCCG GTATCTTGTG AAGTTTGGAA
AAATATATGA AATCCGTGAT GATTTCAACA CCTTCTTGCA TAATGCAGAT AGGGATCTGA TTGCCGAAGT CTTCCATGAA
GTTCTTGATG CTTGGAAAGG ATTTTGAAGA TATGGCAACT TCAAACAAGT ATAGGAAGAC ATGGTGTTAC ATAACATACT
CAAGAAATAG GTTGTTGTTT CGATTTGTTG TGCAGGATTT GTTTTCATGA ACCTAATTCT TTCGCTTAGA TGGATTACTT
TTACGATTTT ATGTACATTC TTATGTTGTG GTCTTCAAAC GTAAACCACA AGTCATTATT GTTTACAGAG AATGTAAATC
ATATGAAAGG AAAAAAAAAC ATATGTTTAT AAATGCAAAT GGATCTGAAT TGTGATG

>Vigan.05G194200.01
ATGAGCGATT CTGCATACAG AGTCGAAACC ACACCACGCC TTGCTCAATG GAGAATCGAA AACTTGGCTT CTTGCACTTA
CCGAAAATCC GATCCTTTCA AGATCGGAAA GTGGAACTGG CATTTGTCTG TGGAGAAGAA CAGGGTTTTG TTTGTTAAAT
TGTTTCCAGA AATATCGAAT CTTACAAGAG ACAACCCTCC AATTGCATCT TTCATCATTC GGGTTGTAAG TTCTGTTGGA
GATCGCAGGG CCATCATACA CCCAGAAATA AAGGACAAAG TTCTAAAGAA CAACGAGGAT TTTGTTTGGG CAATTGAGGT
TCCACTAACT GGGAAATTCA TTATTGACGT TGAGTTTCTA GATTTGAAGA CTGCATCCCC AAACAGTGGA GAACCTTGTT
CCATTTGGGC AGAAGGATTT ACTCAGCAAA GATCAAATGC AAATGCCATA GAGTGTCTTG GTAGAATGCT AACAGAAGGA
ATCCACACTG ACATCACCAT CAATGTTTCT GATGGAAGTA TTGGAGCTCA TAGAGCTGTT CTTGCTGCAA GATCACCCGT
ATTCCGCAGC ATGTTTTCAC ATAATCTTCA AGAGAAAGAG TTGTCAACCA TAAACATTTC AGATATGTCA CTTGATTCAT
GCCAGACTTT TCTCAATTAT CTCTATGGAA TCATCAAACA TGAAGAGTTT CTGATGCATA GGCTGGCCCT TCTTCGTGCA
GCTGACAAGT ATGACATATC TGATCTAAGA GATGCATGCC ATGAGAGTCT TCTTGAAGAC ATTGACACAA AAAATGTACT
TGAGAGGCTC CAAAATGCTT CTTTATATCA GTTGATGAAA CTGAAGATGA CTTGTATCCG GTATCTTGTG AAGTTTGGAA
AAATATATGA AATCCGTGAT GATTTCAACA CCTTCTTGCA TAATGCAGAT AGGGATCTGA TTGCCGAAGT CTTCCATGAA
GTTCTTGATG CTTGGAAAGG ATTTTGA

>Vigan.05G194200.01
MSDSAYRVET TPRLAQWRIE NLASCTYRKS DPFKIGKWNW HLSVEKNRVL FVKLFPEISN LTRDNPPIAS FIIRVVSSVG
DRRAIIHPEI KDKVLKNNED FVWAIEVPLT GKFIIDVEFL DLKTASPNSG EPCSIWAEGF TQQRSNANAI ECLGRMLTEG
IHTDITINVS DGSIGAHRAV LAARSPVFRS MFSHNLQEKE LSTINISDMS LDSCQTFLNY LYGIIKHEEF LMHRLALLRA
ADKYDISDLR DACHESLLED IDTKNVLERL QNASLYQLMK LKMTCIRYLV KFGKIYEIRD DFNTFLHNAD RDLIAEVFHE
VLDAWKGF*