GBrowse Details

Vigan.05G184600.01

Basic Information:
Name: Vigan.05G184600.01
Multiple alignment
Variant Information
Position: Chr05:15984973..15987756 (+ strand)
Length: 2784
Functional Information:
Description: Similar to Uncharacterized protein. [I1N015, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Myb domain, plants (IPR006447)
Homeodomain-like (IPR009057)
SANT domain (IPR017884)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:12.22,4.12,10.40,21.84,3.01,14.74,8.25,28.43
Arabidopsis thaliana homolog: AT5G58900.1
Automatic updates:
Name: DQ822954 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB126 (MYB126) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:15984973..15985989 (+ strand)
Length: 1017
Type: five_prime_UTR
Position: Chr05:15985990..15986417 (+ strand)
Length: 428
Type: CDS
Position: Chr05:15986794..15987331 (+ strand)
Length: 538
Type: CDS
Position: Chr05:15987332..15987756 (+ strand)
Length: 425
Type: three_prime_UTR

>Vigan.05G184600.01 class=Sequence position=Chr05:15984973..15987756 (+ strand)
CACACACATA GCATCCAATC ACAGCTCACC ACCTTCATCC ACTGCTTTTT GGTTCTCTCT CCCTTGGTGC TTCCCCTTTA
AGGAGAGAGT GGCAAAGTTT GTTTTAAGAT TCATTCTTTC AAGCTTCATC ACTTTGCTTT TTCAGCTTCC ATATAATTTC
CATCTTTTCC ATTTGGGGGG CTCCTATTCC TTTTTTGTGC CAAGTTTCTT TTCAGTATTT CTTTCTCTTT TCTTTCTTGC
TCAGCATCAA GAAAAAAGAT TTAAAGAAAA AAAAAACAGT TTTGTTTTGT GTTTTTTTCT AAACAAGCTT TTCTTCTTTT
TCTTCCACCA CCCTCTTCCC TCATAAATTC GGAGTCTTTC TGCTCTTTCC TAATTGGGTC TGTACATTCA TTGTCTTAGG
CTGCACCCCT TTTGCTGTTC CTTGGTTTCT AATTGCTTTC CCAATTGGGG TAAACTCAAA TTGAAGTGCA GAAAGACTTG
TCAGATTTTT CCTCTCTGAA AGTTGTCATT TTTATTTTGT TGGGATTTGT TTTTTGGCTG GAATTTTGCT GTGTCTTAGT
TCCAGTTTTT GGTATCTGGG AGGAACTTCA TTGGGTTTAT AGATCTCATC ATAAGTGGTT CTAGGGTTTT CCTTTGGACC
AATTAGGTAA TAATCTTGAA CCTCAATTTG GAGCATTCCC TTTGATTTTT TTACAAAGTG GGTCTTTTAT AGATTCCTCA
AGAGCATGCC TCCTTTCCTA CACATAAAAA AAAGGCTATT CTGATTCCTT TAAAAAAAAA TGCTTGTTGA TTTATCCTTC
ATAGTGTTGT GGTAAAACCT CCACCTCTGC TTCTCACATA TCTCCCTCTC TCTCCTGCTC TGAATCAACC CTGCTTCCCA
TAAAGTCGTG CAATCTTTCG AGTAAAATCC ACAGAAACAC ACAGACACAG CAAACCAAAG AACCATCTTG AATTGGCTCA
AACCTTGTTC TTGATGCTCC CATAGTTTTT GTGTTCTTGT GTTGTGACTT TGGTGTGATG AAGTGGGAAA TGGAGATCCT
CCCTCCTGCC TCGCCTTACA TGTACAACTC CAATTGGCTT TTGGATGATA ACAGGACCAA CACCAAATGG ACCCCTGCAG
AGAACAAGCT GTTTGAGAAT GCTCTTGCAG TGTATGATAA GGACACCCCG GATCGGTGGC ACAAGGTGGC TGAGATGATA
CCAGGAAAGA CAGTTATGGA TGTGGTGAAG CAGTACAAGG AATTGGAAGC AGATGTTTGT AACATAGAAG CTGGCTTGAT
CCCGATTCCA GGCTACAGTA CCACCACCTC ACCCTTCACC CTAGACTGGG TGAACACTCC TGGCTACGAT GGCTTCAAAG
GCCTCACTGC TAAGAGATCC TCCTCTGGCA GACCTCCTGA GCAGGAAAGG AAGAAAGGTG TGCCATGGAC TGAAGAAGAA
CACAAGTGAG TCATCTTCTT GCTTATTCTT TATTACTGTT GCTTTTAAAT TTTTATTTCC ATGTATGTCT GAGGAATACC
ACATGAAGGA TATTACTATT TAGTTATTGA AAATGGGAAT TAGTCTGAAA AGAAAAATGG ATGTGGTTAA GTTTATGATG
TACTTTGTAT GTGAACCTAG GAGTAGGAGC TATGATGCTG TCTAGTTTGT TATCAAGAGT TGGATATTTC TTATTTGTGT
TAAGGTCTTT ATAGTAGCCT TCATGAGGCA AGCTTTGTGG TTGGTTGGTT AGGTTAAATA AATAAATTCA TGTGCTATTT
ATATCAGATG TTGGGTGTGT CAACTGGGAA CTTGATTATG CTTTGTGAAA ATTCTCCACA GGTTGTTTCT ACTGGGGCTG
AAGAAGTATG GCAAAGGTGA TTGGAGAAAC ATTTCACGCA ATTTTGTGAT CACTCGAACG CCAACTCAAG TTGCCAGTCA
CGCTCAGAAG TACTTCATCA GGCAACTTTC AGGAGGCAAA GACAAGAGGA GGGCTAGCAT CCATGACATC ACAACAGTGA
ATCTCACAGA AACCACCAGA ACTTCTTCAG AAGACAGCAG CAAAAGATCC ACTTCACCAC AGCATTCTGT GATGCTCTCA
CACCAGCACC AGCACCAGCA CCAGCAGCCA ATTTCCAGTG CTGCCTCATC AGGAATGAAT TTCCAATGGA GTAATCAGTC
AAATGCAGGA ATAGCCATGG CTCTCAATCC TGCACATGAA CAAGTGTTTG TCTCCCCTTA TGGCCTTAAC TCATATGGGT
TTAAGGTGCA GGGCCAAAGT CTGCACAGAA GTCCTCTCCA TGAGTCTTCT TACCTAGGAC CTCAGACACC AAACATGGTT
TTCCAAATGC AGCCCTCCCA GCACTATTCC CATGCATGAT GTGGTGGTGG TGGTTGTGTT GAATTATTTA TGCCTAGAAA
CAGTGTCTTT TGCTCAGTGC ACTCACTAGT ACAGTGTCTG TGCCTTTTGC CATGTTTTTA TGTGAATACC TTACATTAGA
CTATTAGTTA GTTATTGCCT TCTTGGTATA TGAACTTGAA GGAAGGTGTT GAAATTTGTT TCTTCATCAA CCTTACATTT
GTGAAAGGTG AGAGCTGCTA GGCAAAAAGA AGTACCAAAC TTTGGTTTTT CGTTTAAGAA TATTGGATTT GAAGCTAAGT
TTAGAATGAA ATGTTAACTT TAAAGAGAAA GGGCCCCTTG TACTATGGCA AGCCATTTAT GTAAGAGAAG GGTAGTACTA
TTGATGCAAA AATTGTATTT AAAGGGCAAA AAAATAGTAA GAAATTGAGA GATCCGTAAT CTAG

>Vigan.05G184600.01
CACACACATA GCATCCAATC ACAGCTCACC ACCTTCATCC ACTGCTTTTT GGTTCTCTCT CCCTTGGTGC TTCCCCTTTA
AGGAGAGAGT GGCAAAGTTT GTTTTAAGAT TCATTCTTTC AAGCTTCATC ACTTTGCTTT TTCAGCTTCC ATATAATTTC
CATCTTTTCC ATTTGGGGGG CTCCTATTCC TTTTTTGTGC CAAGTTTCTT TTCAGTATTT CTTTCTCTTT TCTTTCTTGC
TCAGCATCAA GAAAAAAGAT TTAAAGAAAA AAAAAACAGT TTTGTTTTGT GTTTTTTTCT AAACAAGCTT TTCTTCTTTT
TCTTCCACCA CCCTCTTCCC TCATAAATTC GGAGTCTTTC TGCTCTTTCC TAATTGGGTC TGTACATTCA TTGTCTTAGG
CTGCACCCCT TTTGCTGTTC CTTGGTTTCT AATTGCTTTC CCAATTGGGG TAAACTCAAA TTGAAGTGCA GAAAGACTTG
TCAGATTTTT CCTCTCTGAA AGTTGTCATT TTTATTTTGT TGGGATTTGT TTTTTGGCTG GAATTTTGCT GTGTCTTAGT
TCCAGTTTTT GGTATCTGGG AGGAACTTCA TTGGGTTTAT AGATCTCATC ATAAGTGGTT CTAGGGTTTT CCTTTGGACC
AATTAGGTAA TAATCTTGAA CCTCAATTTG GAGCATTCCC TTTGATTTTT TTACAAAGTG GGTCTTTTAT AGATTCCTCA
AGAGCATGCC TCCTTTCCTA CACATAAAAA AAAGGCTATT CTGATTCCTT TAAAAAAAAA TGCTTGTTGA TTTATCCTTC
ATAGTGTTGT GGTAAAACCT CCACCTCTGC TTCTCACATA TCTCCCTCTC TCTCCTGCTC TGAATCAACC CTGCTTCCCA
TAAAGTCGTG CAATCTTTCG AGTAAAATCC ACAGAAACAC ACAGACACAG CAAACCAAAG AACCATCTTG AATTGGCTCA
AACCTTGTTC TTGATGCTCC CATAGTTTTT GTGTTCTTGT GTTGTGACTT TGGTGTGATG AAGTGGGAAA TGGAGATCCT
CCCTCCTGCC TCGCCTTACA TGTACAACTC CAATTGGCTT TTGGATGATA ACAGGACCAA CACCAAATGG ACCCCTGCAG
AGAACAAGCT GTTTGAGAAT GCTCTTGCAG TGTATGATAA GGACACCCCG GATCGGTGGC ACAAGGTGGC TGAGATGATA
CCAGGAAAGA CAGTTATGGA TGTGGTGAAG CAGTACAAGG AATTGGAAGC AGATGTTTGT AACATAGAAG CTGGCTTGAT
CCCGATTCCA GGCTACAGTA CCACCACCTC ACCCTTCACC CTAGACTGGG TGAACACTCC TGGCTACGAT GGCTTCAAAG
GCCTCACTGC TAAGAGATCC TCCTCTGGCA GACCTCCTGA GCAGGAAAGG AAGAAAGGTG TGCCATGGAC TGAAGAAGAA
CACAAGTTGT TTCTACTGGG GCTGAAGAAG TATGGCAAAG GTGATTGGAG AAACATTTCA CGCAATTTTG TGATCACTCG
AACGCCAACT CAAGTTGCCA GTCACGCTCA GAAGTACTTC ATCAGGCAAC TTTCAGGAGG CAAAGACAAG AGGAGGGCTA
GCATCCATGA CATCACAACA GTGAATCTCA CAGAAACCAC CAGAACTTCT TCAGAAGACA GCAGCAAAAG ATCCACTTCA
CCACAGCATT CTGTGATGCT CTCACACCAG CACCAGCACC AGCACCAGCA GCCAATTTCC AGTGCTGCCT CATCAGGAAT
GAATTTCCAA TGGAGTAATC AGTCAAATGC AGGAATAGCC ATGGCTCTCA ATCCTGCACA TGAACAAGTG TTTGTCTCCC
CTTATGGCCT TAACTCATAT GGGTTTAAGG TGCAGGGCCA AAGTCTGCAC AGAAGTCCTC TCCATGAGTC TTCTTACCTA
GGACCTCAGA CACCAAACAT GGTTTTCCAA ATGCAGCCCT CCCAGCACTA TTCCCATGCA TGATGTGGTG GTGGTGGTTG
TGTTGAATTA TTTATGCCTA GAAACAGTGT CTTTTGCTCA GTGCACTCAC TAGTACAGTG TCTGTGCCTT TTGCCATGTT
TTTATGTGAA TACCTTACAT TAGACTATTA GTTAGTTATT GCCTTCTTGG TATATGAACT TGAAGGAAGG TGTTGAAATT
TGTTTCTTCA TCAACCTTAC ATTTGTGAAA GGTGAGAGCT GCTAGGCAAA AAGAAGTACC AAACTTTGGT TTTTCGTTTA
AGAATATTGG ATTTGAAGCT AAGTTTAGAA TGAAATGTTA ACTTTAAAGA GAAAGGGCCC CTTGTACTAT GGCAAGCCAT
TTATGTAAGA GAAGGGTAGT ACTATTGATG CAAAAATTGT ATTTAAAGGG CAAAAAAATA GTAAGAAATT GAGAGATCCG
TAATCTAG

>Vigan.05G184600.01
ATGAAGTGGG AAATGGAGAT CCTCCCTCCT GCCTCGCCTT ACATGTACAA CTCCAATTGG CTTTTGGATG ATAACAGGAC
CAACACCAAA TGGACCCCTG CAGAGAACAA GCTGTTTGAG AATGCTCTTG CAGTGTATGA TAAGGACACC CCGGATCGGT
GGCACAAGGT GGCTGAGATG ATACCAGGAA AGACAGTTAT GGATGTGGTG AAGCAGTACA AGGAATTGGA AGCAGATGTT
TGTAACATAG AAGCTGGCTT GATCCCGATT CCAGGCTACA GTACCACCAC CTCACCCTTC ACCCTAGACT GGGTGAACAC
TCCTGGCTAC GATGGCTTCA AAGGCCTCAC TGCTAAGAGA TCCTCCTCTG GCAGACCTCC TGAGCAGGAA AGGAAGAAAG
GTGTGCCATG GACTGAAGAA GAACACAAGT TGTTTCTACT GGGGCTGAAG AAGTATGGCA AAGGTGATTG GAGAAACATT
TCACGCAATT TTGTGATCAC TCGAACGCCA ACTCAAGTTG CCAGTCACGC TCAGAAGTAC TTCATCAGGC AACTTTCAGG
AGGCAAAGAC AAGAGGAGGG CTAGCATCCA TGACATCACA ACAGTGAATC TCACAGAAAC CACCAGAACT TCTTCAGAAG
ACAGCAGCAA AAGATCCACT TCACCACAGC ATTCTGTGAT GCTCTCACAC CAGCACCAGC ACCAGCACCA GCAGCCAATT
TCCAGTGCTG CCTCATCAGG AATGAATTTC CAATGGAGTA ATCAGTCAAA TGCAGGAATA GCCATGGCTC TCAATCCTGC
ACATGAACAA GTGTTTGTCT CCCCTTATGG CCTTAACTCA TATGGGTTTA AGGTGCAGGG CCAAAGTCTG CACAGAAGTC
CTCTCCATGA GTCTTCTTAC CTAGGACCTC AGACACCAAA CATGGTTTTC CAAATGCAGC CCTCCCAGCA CTATTCCCAT
GCATGA

>Vigan.05G184600.01
MKWEMEILPP ASPYMYNSNW LLDDNRTNTK WTPAENKLFE NALAVYDKDT PDRWHKVAEM IPGKTVMDVV KQYKELEADV
CNIEAGLIPI PGYSTTTSPF TLDWVNTPGY DGFKGLTAKR SSSGRPPEQE RKKGVPWTEE EHKLFLLGLK KYGKGDWRNI
SRNFVITRTP TQVASHAQKY FIRQLSGGKD KRRASIHDIT TVNLTETTRT SSEDSSKRST SPQHSVMLSH QHQHQHQQPI
SSAASSGMNF QWSNQSNAGI AMALNPAHEQ VFVSPYGLNS YGFKVQGQSL HRSPLHESSY LGPQTPNMVF QMQPSQHYSH
A*