GBrowse Details

Vigan.05G177800.01

Basic Information:
Name: Vigan.05G177800.01
Multiple alignment
Variant Information
Position: Chr05:15171506..15174829 (+ strand)
Length: 3324
Functional Information:
Description: Similar to Uncharacterized protein. [I1MZX3, Glycine max]
GO: Molecular Function: N-acetyltransferase activity (GO:0008080)
InterPro: GNAT domain (IPR000182)
Acyl-CoA N-acyltransferase (IPR016181)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.02,0.04,16.10,3.85,3.43,1.77,0.52,2.16
Automatic updates:
Name: BT094065 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-18I21 unknown mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:15171506..15171902 (+ strand)
Length: 397
Type: five_prime_UTR
Position: Chr05:15171903..15172076 (+ strand)
Length: 174
Type: CDS
Position: Chr05:15172288..15172863 (+ strand)
Length: 576
Type: CDS
Position: Chr05:15172864..15174829 (+ strand)
Length: 1966
Type: three_prime_UTR

>Vigan.05G177800.01 class=Sequence position=Chr05:15171506..15174829 (+ strand)
TATTAATCTA ACTTTTGTCT ACTATTATTA TTGAAGCCTA GGTTATGGAT GAATCTGATA AAGAACATTC TCCCTAGTTT
CAATCTCTCT CTTTCTATTT TCACTCTTCC TTTTTCTTTC TCTCTCTTTC CACCACCTTT TTTTTTCTTT TGTATTTTAT
TGTATTTTGT TTTTCTTTCT ACCTCCTGCA TATAAATCAT TATCATAATG AGGTCTATGC CAAACCATTC TTGTTGTAGT
ACTTGTATTA CTTCTCGTTG GTTGCACTGT CTTGCTATTT GTATCTTGTG TACCTTGTTG AGCTTTGGGT TTCCTTTTAC
TTTTGTTTCG CTGAATCATC ACACATCAAA CACCTTCGTT CTAAGTTGAT CATCCTTGAA ATCTCTTTGT TTTGGGTATG
GAATTCAACA AGTTCAGAAT CAGAAGCTAC GAGGGGCAAT ATGATAGGGC TCAAGTGGAA GATCTTGAGA GAAGATGCGA
GGTAGGGCCA TCAGAAAGCG TGTTCCTCTT CACAGACACT ATGGGTGACC CCATTTGTAG GATTCGGAAC AGTCCAATGT
ACATGATGCT GGTAAGTGAT ACACAATACT ATGCCAGCCA CTACAAGGCA CTAACTTCAT GCCTTCAACA CTTTCTTTTT
CTTCTTCTTA TTATATGTAT CATTATATGT ACGTGCCACA ATTGCCACCA TTTAATCTTC TATGTCTTTC TCATGTTCTT
GTTCTTCTCA TTCTTCTTCT TTGATCATCA TGTCCACCAC TAACTGCTCA ATTTGGTGGT AGGTGGCAGA GTTGGAGAAT
GAACTGGTTG GTGTGATTCA AGGGTCTATA AAGCTGGTGA CGGTTCATGG TCATCCTCCG AAGGATTTGG CAAAGGTGGG
GTATGTCCTT GGCTTAAGGG TATCACCCCA TCACAGGAGA AAAGCGATTG GCTCGAGCCT TGTGAGAAGG CTAGAAGAAT
GGTTCAGTTC AAAGGATGTG GACTATGCAT ATATGGCAAC AGAGAAAGAC AACCAAGCCT CGGTCAGTCT CTTTATGGAC
AAGTTTGGCT ACACCAAGTT TAGGACTCCA GCTATTCTTG TGAACCCTGT GAACCATCAT TGCTTTCAAA TATCAGCCAA
CATTGAGATA GCAAGGTTGA AGGTTGACCA AGCTGAATAC CTCTACAGAA GATTCATGGG GTCCACAGAG TTTTTTCCCA
ATGACATAGG CAACATACTT AGGAACAAGC TAAGTTTGGG GACATGGGTA GCCTATTTCA AGGGAGATAT TGGTTGGGGG
ATTTTGGGTC AGATGGACAA GTCCCTAATA GTTGGGCAAT GCTCAGTGTA TGGAACAGTG GAGAGATATT CAAGCTGAGG
CTAGGAAAAG CACCATTTTC TTGCTTGTTG TGCACCAAGA GTTGGTGGTT GATTGATAAA ATCTTCCCAT GTTTGAAACT
TCCAATCATA CCTGATTTCT TCAACCCATT TGGGTTCTAT TTCATGTATG GGGTGCACCA TGAAGGGCCA TTCTCAGGGA
AGCTGGTGAG AGCCTTGTGC CAATTCGTAC ACAACATGGC TGCAGAATCA AAGGATGAGA ATTGCAAGAT CATTGTCACT
GAAGTTGGTG GAAGAGACGA GCTCAACCAT CATATTCCAC ATTGGAAATT GCTCTCATGC CCAGAGGACT TGTGGTGCAT
AAAGCCTTTG AAAAATGAAG GGACAAATAA CAAGTTCCAT GAATTAACCA AAACCCCACC AACAAGAGCT CTTTTTGTAG
ACCCAAGAGA GGTTTAATTA ATGCATGATC TCAAAAAACA CATATATTAA GAAAAAAAAA ATAAAAGAGT AATAAAAGGG
GGGACAAGAA AAAGCTTGGA AATATCTTCA CCTTAATTTT CTTTCTTTTC TTTCCTTTCC TTTCCTTAGC TTTCTCTAAG
AACCAAAACC CACCTCATGT ATTGTGTGAC AACTCCATCC ATCTCTCTTG GTGGGGGGTT TTCTCTGGTT CCTTTCACAT
CGGTGACACA AAATCTTAAA AGATATCCAT AATTTTGGTG CCACACTTTG GTGTCCTTCT TAGCAATTCC CATCTTCTGC
CTCATGACTC TGACTACTCA ATCACCATGG TGGTCCAAAC TTTGTTCCTT CCCCTCAGGT AAAATTTTTA GCTGGACCCT
CCTCACTCAC TTTGTCGCAT CTCATTGGGA TATCATCTCC GTAACATGTA TGTCATCACT GAAAAAAAAA ACAAAGAAAA
AAGAAAAGAG ATTTACTTTC TAGCCATTTT ATATACATAA TGTGTGATCA TGAAAGTAAC CATTATTCTA TTCCATTCAA
GTCAGACTTA GACAGCTTCT GTTCCAAGAT AAAGGGGGAA AGAAAAAATG CATGTGACTG TCAAGGGGTT GGTTTCTTCT
TCATTTGTGC TCGAGCATTG TTGTCCCTAA CTGCATGAGG AATGTTGAAG TTTCCATAGC CTGTGTGGGA ATCAGCCAAA
AACACAAACG AGAGACTTTG CTTGGGTTTT CACTTTTTAC CATTAATGCA AATGTTGGTT AACTGGCTAG TGACCTTGCT
CTTTGTTAGA ACCATATAAA GAGTGAGTTG GACTAATAAA GTTAGTGGAT TTCTATTTAG AAAGATTCTG TAATTGTTCT
ACTTCTGTTC AGTATGACCA CGGAATAGCA CTCATGAACC TTCTGCAATA AATGATTGAT ACATTACATT TATCCACACA
TTTCTCATCA TCAATGTTTT TCAGTAAAAA CAGTTTACTT AATCCAGATC AAAATTTCAT TATCAAAGGT TGTGGCTTTA
GTCATGTTCC TTTGAGTTTC CAAAACTTTT TCTGTCCACA TTTCATAAAA TAGACATTAA GACCCTTTTG GTTATGAGGA
AAGAAAGTTT TCCTTGAGTT CACACTAAAT TTTCTATGGC AAGGGCCATG CATTGTCCTT CCTTTGTCTG GAAAACCATG
GTGCCGAAAG TGGTTCTTGG AAATAAACCT AAAGATGCAG AGAGCAGCTA GACTTAGTAG CCTGAAAAAG AAGGGTGTCT
GAAACTGAAG AAATTGAAGA AACATTGAAC TTGAAGGTAG GCTGAGGACC ACTTTGATTA GTAATTTAGC AGTACTATCT
ATCTCCATAG AAAGCCAAAA ACCAAAAGGT CAAAATTTCT GTCATTTGTT TTGGACTTAG TGCTTGTCGT GAAGTGGAGG
AAGCTACCTT TGCTTGCTGT TTTTAGTTTT CGCAAACAAT TATTATGTCA TGCACTTTAC TTCCTGCTTA TGTTCAAAGA
CATTTCATGG CTTTCTTGCC AATCAATACC AACCATAATA ATAC

>Vigan.05G177800.01
TATTAATCTA ACTTTTGTCT ACTATTATTA TTGAAGCCTA GGTTATGGAT GAATCTGATA AAGAACATTC TCCCTAGTTT
CAATCTCTCT CTTTCTATTT TCACTCTTCC TTTTTCTTTC TCTCTCTTTC CACCACCTTT TTTTTTCTTT TGTATTTTAT
TGTATTTTGT TTTTCTTTCT ACCTCCTGCA TATAAATCAT TATCATAATG AGGTCTATGC CAAACCATTC TTGTTGTAGT
ACTTGTATTA CTTCTCGTTG GTTGCACTGT CTTGCTATTT GTATCTTGTG TACCTTGTTG AGCTTTGGGT TTCCTTTTAC
TTTTGTTTCG CTGAATCATC ACACATCAAA CACCTTCGTT CTAAGTTGAT CATCCTTGAA ATCTCTTTGT TTTGGGTATG
GAATTCAACA AGTTCAGAAT CAGAAGCTAC GAGGGGCAAT ATGATAGGGC TCAAGTGGAA GATCTTGAGA GAAGATGCGA
GGTAGGGCCA TCAGAAAGCG TGTTCCTCTT CACAGACACT ATGGGTGACC CCATTTGTAG GATTCGGAAC AGTCCAATGT
ACATGATGCT GGTGGCAGAG TTGGAGAATG AACTGGTTGG TGTGATTCAA GGGTCTATAA AGCTGGTGAC GGTTCATGGT
CATCCTCCGA AGGATTTGGC AAAGGTGGGG TATGTCCTTG GCTTAAGGGT ATCACCCCAT CACAGGAGAA AAGCGATTGG
CTCGAGCCTT GTGAGAAGGC TAGAAGAATG GTTCAGTTCA AAGGATGTGG ACTATGCATA TATGGCAACA GAGAAAGACA
ACCAAGCCTC GGTCAGTCTC TTTATGGACA AGTTTGGCTA CACCAAGTTT AGGACTCCAG CTATTCTTGT GAACCCTGTG
AACCATCATT GCTTTCAAAT ATCAGCCAAC ATTGAGATAG CAAGGTTGAA GGTTGACCAA GCTGAATACC TCTACAGAAG
ATTCATGGGG TCCACAGAGT TTTTTCCCAA TGACATAGGC AACATACTTA GGAACAAGCT AAGTTTGGGG ACATGGGTAG
CCTATTTCAA GGGAGATATT GGTTGGGGGA TTTTGGGTCA GATGGACAAG TCCCTAATAG TTGGGCAATG CTCAGTGTAT
GGAACAGTGG AGAGATATTC AAGCTGAGGC TAGGAAAAGC ACCATTTTCT TGCTTGTTGT GCACCAAGAG TTGGTGGTTG
ATTGATAAAA TCTTCCCATG TTTGAAACTT CCAATCATAC CTGATTTCTT CAACCCATTT GGGTTCTATT TCATGTATGG
GGTGCACCAT GAAGGGCCAT TCTCAGGGAA GCTGGTGAGA GCCTTGTGCC AATTCGTACA CAACATGGCT GCAGAATCAA
AGGATGAGAA TTGCAAGATC ATTGTCACTG AAGTTGGTGG AAGAGACGAG CTCAACCATC ATATTCCACA TTGGAAATTG
CTCTCATGCC CAGAGGACTT GTGGTGCATA AAGCCTTTGA AAAATGAAGG GACAAATAAC AAGTTCCATG AATTAACCAA
AACCCCACCA ACAAGAGCTC TTTTTGTAGA CCCAAGAGAG GTTTAATTAA TGCATGATCT CAAAAAACAC ATATATTAAG
AAAAAAAAAA TAAAAGAGTA ATAAAAGGGG GGACAAGAAA AAGCTTGGAA ATATCTTCAC CTTAATTTTC TTTCTTTTCT
TTCCTTTCCT TTCCTTAGCT TTCTCTAAGA ACCAAAACCC ACCTCATGTA TTGTGTGACA ACTCCATCCA TCTCTCTTGG
TGGGGGGTTT TCTCTGGTTC CTTTCACATC GGTGACACAA AATCTTAAAA GATATCCATA ATTTTGGTGC CACACTTTGG
TGTCCTTCTT AGCAATTCCC ATCTTCTGCC TCATGACTCT GACTACTCAA TCACCATGGT GGTCCAAACT TTGTTCCTTC
CCCTCAGGTA AAATTTTTAG CTGGACCCTC CTCACTCACT TTGTCGCATC TCATTGGGAT ATCATCTCCG TAACATGTAT
GTCATCACTG AAAAAAAAAA CAAAGAAAAA AGAAAAGAGA TTTACTTTCT AGCCATTTTA TATACATAAT GTGTGATCAT
GAAAGTAACC ATTATTCTAT TCCATTCAAG TCAGACTTAG ACAGCTTCTG TTCCAAGATA AAGGGGGAAA GAAAAAATGC
ATGTGACTGT CAAGGGGTTG GTTTCTTCTT CATTTGTGCT CGAGCATTGT TGTCCCTAAC TGCATGAGGA ATGTTGAAGT
TTCCATAGCC TGTGTGGGAA TCAGCCAAAA ACACAAACGA GAGACTTTGC TTGGGTTTTC ACTTTTTACC ATTAATGCAA
ATGTTGGTTA ACTGGCTAGT GACCTTGCTC TTTGTTAGAA CCATATAAAG AGTGAGTTGG ACTAATAAAG TTAGTGGATT
TCTATTTAGA AAGATTCTGT AATTGTTCTA CTTCTGTTCA GTATGACCAC GGAATAGCAC TCATGAACCT TCTGCAATAA
ATGATTGATA CATTACATTT ATCCACACAT TTCTCATCAT CAATGTTTTT CAGTAAAAAC AGTTTACTTA ATCCAGATCA
AAATTTCATT ATCAAAGGTT GTGGCTTTAG TCATGTTCCT TTGAGTTTCC AAAACTTTTT CTGTCCACAT TTCATAAAAT
AGACATTAAG ACCCTTTTGG TTATGAGGAA AGAAAGTTTT CCTTGAGTTC ACACTAAATT TTCTATGGCA AGGGCCATGC
ATTGTCCTTC CTTTGTCTGG AAAACCATGG TGCCGAAAGT GGTTCTTGGA AATAAACCTA AAGATGCAGA GAGCAGCTAG
ACTTAGTAGC CTGAAAAAGA AGGGTGTCTG AAACTGAAGA AATTGAAGAA ACATTGAACT TGAAGGTAGG CTGAGGACCA
CTTTGATTAG TAATTTAGCA GTACTATCTA TCTCCATAGA AAGCCAAAAA CCAAAAGGTC AAAATTTCTG TCATTTGTTT
TGGACTTAGT GCTTGTCGTG AAGTGGAGGA AGCTACCTTT GCTTGCTGTT TTTAGTTTTC GCAAACAATT ATTATGTCAT
GCACTTTACT TCCTGCTTAT GTTCAAAGAC ATTTCATGGC TTTCTTGCCA ATCAATACCA ACCATAATAA TAC

>Vigan.05G177800.01
ATGGAATTCA ACAAGTTCAG AATCAGAAGC TACGAGGGGC AATATGATAG GGCTCAAGTG GAAGATCTTG AGAGAAGATG
CGAGGTAGGG CCATCAGAAA GCGTGTTCCT CTTCACAGAC ACTATGGGTG ACCCCATTTG TAGGATTCGG AACAGTCCAA
TGTACATGAT GCTGGTGGCA GAGTTGGAGA ATGAACTGGT TGGTGTGATT CAAGGGTCTA TAAAGCTGGT GACGGTTCAT
GGTCATCCTC CGAAGGATTT GGCAAAGGTG GGGTATGTCC TTGGCTTAAG GGTATCACCC CATCACAGGA GAAAAGCGAT
TGGCTCGAGC CTTGTGAGAA GGCTAGAAGA ATGGTTCAGT TCAAAGGATG TGGACTATGC ATATATGGCA ACAGAGAAAG
ACAACCAAGC CTCGGTCAGT CTCTTTATGG ACAAGTTTGG CTACACCAAG TTTAGGACTC CAGCTATTCT TGTGAACCCT
GTGAACCATC ATTGCTTTCA AATATCAGCC AACATTGAGA TAGCAAGGTT GAAGGTTGAC CAAGCTGAAT ACCTCTACAG
AAGATTCATG GGGTCCACAG AGTTTTTTCC CAATGACATA GGCAACATAC TTAGGAACAA GCTAAGTTTG GGGACATGGG
TAGCCTATTT CAAGGGAGAT ATTGGTTGGG GGATTTTGGG TCAGATGGAC AAGTCCCTAA TAGTTGGGCA ATGCTCAGTG
TATGGAACAG TGGAGAGATA TTCAAGCTGA 

>Vigan.05G177800.01
MEFNKFRIRS YEGQYDRAQV EDLERRCEVG PSESVFLFTD TMGDPICRIR NSPMYMMLVA ELENELVGVI QGSIKLVTVH
GHPPKDLAKV GYVLGLRVSP HHRRKAIGSS LVRRLEEWFS SKDVDYAYMA TEKDNQASVS LFMDKFGYTK FRTPAILVNP
VNHHCFQISA NIEIARLKVD QAEYLYRRFM GSTEFFPNDI GNILRNKLSL GTWVAYFKGD IGWGILGQMD KSLIVGQCSV
YGTVERYSS*