GBrowse Details

Vigan.05G070700.01

Basic Information:
Name: Vigan.05G070700.01
Multiple alignment
Variant Information
Position: Chr05:5241267..5243160 (+ strand)
Length: 1894
Functional Information:
Description: Similar to Uncharacterized protein. [I1M1C5, Glycine max]
InterPro: Uncharacterised protein family UPF0497, trans-membrane plant subgroup (IPR006459)
Uncharacterised protein family UPF0497, trans-membrane plant (IPR006702)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.11,0.03,1.22,11.98,0.80,0.42
Arabidopsis thaliana homolog: AT3G06390.1
Automatic updates:
Name: NM_001370861 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MARVEL domain-containing protein (LOC100781023), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:5241267..5241395 (+ strand)
Length: 129
Type: five_prime_UTR
Position: Chr05:5241396..5241613 (+ strand)
Length: 218
Type: CDS
Position: Chr05:5242172..5242298 (+ strand)
Length: 127
Type: CDS
Position: Chr05:5242422..5242646 (+ strand)
Length: 225
Type: CDS
Position: Chr05:5242647..5243160 (+ strand)
Length: 514
Type: three_prime_UTR

>Vigan.05G070700.01 class=Sequence position=Chr05:5241267..5243160 (+ strand)
AACTTCATTG CTCAACTATC TCCACCCTGC ATCTTTCAAA GTTGCAATTT GCAAGTCCCA CTAAGTCTAC TACTAGTACC
TACCACTCAA ATCAACTTCA TTACTCACCT TGCTCATAAG CACCACTTCA TGGCTTCTAC AGATATTGAG TACAAATCAT
CTTCAACACC ACCTCCTCCG GCTGGAGTGG ATTATTTCAA AGTTCATGTG ATCCTCAGAT TCCTGTTGTT GGCCGCATCA
GTGGTGGCAC TTGGAGTGAT TGTCTCCAGT GATCAAACAG AGCTAGTCCT CTTCCAAGGT ACGCTTGTAC CTCAGCCAGC
CAAGTTCCAG CACTCACCAG CTTTTGTGTA AGTTGAGAAT CATTCAAAAT CTTTGCAGAT TTACTATTTG TGGTTATTTG
TGATACAGGA TCAAGTATCT TGATACAAAA GAAGAATCAG TGGCAAAAAG CATACCGACC TTGAGATAAA AGTTACCCTT
CACTGCTTTA AGTTGTTTTT GTTAAATTAC CGAGTTCTGT GAGACAATTT TAGAGGTTTA GGAGTACCAA ACTTTAAAAT
AAGAATGGAA TATAATGGTC TTGTATGAAT TTTATTGCAA AAGTAAATGA TTGATCAGAT GGCTTTATTA CTTGCTTTGC
AAACACAAGG TAAAGTTTTC TTTTTTCCTT CCTTCATTGT GAGTATATGT TTTGTTTTTT GTTTATGTTG TATATTCCCA
AGGTCATGCT CGTTTCAAGA TTTTGTTTCT GTATTTTTAA TTTAAAGATC CTAAGTCACC ATTCACATAA ATTTATTATG
AAGACTAATT CTATTTGCTT CTTTTCTTCT CTCTTTCTTT GTCAAATACA TCTTCTAAAG ATCATTCAAT GACAATTTTA
CCTCGACAAA TTGATATGCA TGTAGATATT TTGTGGCTGC ATTCAGTGTC TCTGGCCTTT ATGCCCTCGT TTCTGCTCTA
GCCTCTATCG CTGTAATCCA GCAGCCAGAA TTCAAACTGA AGTTCCTCCT CAACTTTATC TTCTGGGATA CAGTAATTGA
TCTATTAACT TTTCTTTCCA CATTGCTATT CATCTTGTTT TCTTAACTTT CTTGCTTTAC ATACAAAACC AAAATAAAGA
GATTATGATA AGTCGTTCAC CATGACTTGG TACAGCTAAT ACTGGGGATA ATAGCCTCAG CAACAGGAGC AGCAGGAACT
GTGGCATATA TTGGTTTAAA GGGAAACAGT CATGTGGGTT GGATAAAAGT TTGCAATGTC TACGACAAGT TCTGTAGGCA
TCTTGCTGGA TCCATAGCTG TGGCTTTGTT TGGCAGCATT ATCACTGTTC TGCTCATCTG GCTTTCAGCT TTCACCATTT
ACAGCCGAGT CCCCAAGTAG AAGGAAGGAA TACGAGCCAT TCAGCATATA CATATTCACT AAATCAGTGT GTCGAGTTAA
TATTCATAGT TTGGTGTGAA TACCCTTTTG GTCTTTGTGA GTGTTTCTTC TAAGGTGGTG ACCATATGTG AAAATGAATG
ATAGTAACAC ATTCTTTTCA CATATTCTTT GTCATTGAAT GAAATTCATG TGAGTCTTGC TATATGATGC AGGTAGACTC
CATATTCACC AAGTTTCATA TAAATTACAT CTAGGAATAA TGTACATATT GAAAAGTTGT GTCAAGTAAT CCGCATCTAG
CATTTCTCAC GTTTGTGAAG TGTAAACGAT GTCTCCATGG ATCCAGTTGT ATTTTCCATT CTATTTGTGC TGAAAAGAAT
TATCCGATTA TCTTTCTCCC TCAAAAGCAA AATATGTTTA TCACTAATCA ATCAAGCACA AGTAATATGG TTAATGCTTT
TATATTTAAT CCCCTAGCTT GCTTTAAAAT AGGGTTTAGT CCATCCATTC TAAA

>Vigan.05G070700.01
AACTTCATTG CTCAACTATC TCCACCCTGC ATCTTTCAAA GTTGCAATTT GCAAGTCCCA CTAAGTCTAC TACTAGTACC
TACCACTCAA ATCAACTTCA TTACTCACCT TGCTCATAAG CACCACTTCA TGGCTTCTAC AGATATTGAG TACAAATCAT
CTTCAACACC ACCTCCTCCG GCTGGAGTGG ATTATTTCAA AGTTCATGTG ATCCTCAGAT TCCTGTTGTT GGCCGCATCA
GTGGTGGCAC TTGGAGTGAT TGTCTCCAGT GATCAAACAG AGCTAGTCCT CTTCCAAGGT ACGCTTGTAC CTCAGCCAGC
CAAGTTCCAG CACTCACCAG CTTTTGTATA TTTTGTGGCT GCATTCAGTG TCTCTGGCCT TTATGCCCTC GTTTCTGCTC
TAGCCTCTAT CGCTGTAATC CAGCAGCCAG AATTCAAACT GAAGTTCCTC CTCAACTTTA TCTTCTGGGA TACACTAATA
CTGGGGATAA TAGCCTCAGC AACAGGAGCA GCAGGAACTG TGGCATATAT TGGTTTAAAG GGAAACAGTC ATGTGGGTTG
GATAAAAGTT TGCAATGTCT ACGACAAGTT CTGTAGGCAT CTTGCTGGAT CCATAGCTGT GGCTTTGTTT GGCAGCATTA
TCACTGTTCT GCTCATCTGG CTTTCAGCTT TCACCATTTA CAGCCGAGTC CCCAAGTAGA AGGAAGGAAT ACGAGCCATT
CAGCATATAC ATATTCACTA AATCAGTGTG TCGAGTTAAT ATTCATAGTT TGGTGTGAAT ACCCTTTTGG TCTTTGTGAG
TGTTTCTTCT AAGGTGGTGA CCATATGTGA AAATGAATGA TAGTAACACA TTCTTTTCAC ATATTCTTTG TCATTGAATG
AAATTCATGT GAGTCTTGCT ATATGATGCA GGTAGACTCC ATATTCACCA AGTTTCATAT AAATTACATC TAGGAATAAT
GTACATATTG AAAAGTTGTG TCAAGTAATC CGCATCTAGC ATTTCTCACG TTTGTGAAGT GTAAACGATG TCTCCATGGA
TCCAGTTGTA TTTTCCATTC TATTTGTGCT GAAAAGAATT ATCCGATTAT CTTTCTCCCT CAAAAGCAAA ATATGTTTAT
CACTAATCAA TCAAGCACAA GTAATATGGT TAATGCTTTT ATATTTAATC CCCTAGCTTG CTTTAAAATA GGGTTTAGTC
CATCCATTCT AAA

>Vigan.05G070700.01
ATGGCTTCTA CAGATATTGA GTACAAATCA TCTTCAACAC CACCTCCTCC GGCTGGAGTG GATTATTTCA AAGTTCATGT
GATCCTCAGA TTCCTGTTGT TGGCCGCATC AGTGGTGGCA CTTGGAGTGA TTGTCTCCAG TGATCAAACA GAGCTAGTCC
TCTTCCAAGG TACGCTTGTA CCTCAGCCAG CCAAGTTCCA GCACTCACCA GCTTTTGTAT ATTTTGTGGC TGCATTCAGT
GTCTCTGGCC TTTATGCCCT CGTTTCTGCT CTAGCCTCTA TCGCTGTAAT CCAGCAGCCA GAATTCAAAC TGAAGTTCCT
CCTCAACTTT ATCTTCTGGG ATACACTAAT ACTGGGGATA ATAGCCTCAG CAACAGGAGC AGCAGGAACT GTGGCATATA
TTGGTTTAAA GGGAAACAGT CATGTGGGTT GGATAAAAGT TTGCAATGTC TACGACAAGT TCTGTAGGCA TCTTGCTGGA
TCCATAGCTG TGGCTTTGTT TGGCAGCATT ATCACTGTTC TGCTCATCTG GCTTTCAGCT TTCACCATTT ACAGCCGAGT
CCCCAAGTAG 

>Vigan.05G070700.01
MASTDIEYKS SSTPPPPAGV DYFKVHVILR FLLLAASVVA LGVIVSSDQT ELVLFQGTLV PQPAKFQHSP AFVYFVAAFS
VSGLYALVSA LASIAVIQQP EFKLKFLLNF IFWDTLILGI IASATGAAGT VAYIGLKGNS HVGWIKVCNV YDKFCRHLAG
SIAVALFGSI ITVLLIWLSA FTIYSRVPK*